CmoCh08G003010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G003010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Auxin-responsive protein
Location	Cmo_Chr08: 1859090 .. 1860718 (+)
RNA-Seq Expression	CmoCh08G003010
Synteny	CmoCh08G003010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATATATTTTTAGTGGTAGGTAATATAAAATCCACTTTTATTTATTTATTTATTTATTTGTTGGTTTTAAATTTATGTAAATAATAAATGCAAAAAAGGAGACACGTGTCGAAATTTGTTTGGTAGAGTTCATGCAGACCATACCGTGCGGCTTTAACAATTATCCCCCTCCCATTCTATATATTCTCTTTCCATTGCAAACTTTCATTTCAACTCCAAAAATAGAAACTTTCTTCATAATTCTTTGCACTTCAATTTCCCTCTAATCTTCAAACACTTCAATTTCCAATCCTAATGGCTGTTTCTGATGACCGAGATCTCAACCTCCAAGCCACCGAGCTCCGCCTCGGCCTCCCTGGCTCCGACCAGCCCGACCACCGCTGCGGATCGCAGCCTAACAAGAGACCCTTTTCAGAGATTGATAAGGAAAATGACAGCCGTGTCTCGGATGTCGAGAATGGCTCCGATCCGAGCTCGCAACCTCCTCCCTCCAAGTAAGTCCTAGATCTTGGATACACTAACATATAAGTAACTATGGCATGATAAAAACTTGTCTAAGTCTTCAAATTGCCTTTTATAGAGCGCAAATTGTTGGATGGCCACCGGTTCGATCGTATCGAAAGAATTGTTTGGTTGGAAAGAAAAGCGAGGCGGAAAGTTGCAATGGAGGGTACGTGAAAGTGAGTATGGATGGGGCTCCATACTTGAGGAAGATCGATCTAACCATTTACAAAAGCTATGTGGAGCTCGTAAAGGCCTTGGAAAACATGTTCAACTTCAATCTTGGTAAGAGAAATTACTAATGATCTATCAGCTTAAACTTTTGAATTAGTTAGTCTAATGATCGGTTCAACATCAGGCGGTTATTCTGAGAAGGAGGGTTTCAATGGATCCGATTACGTTCCAACATACGAAGATAAAGATAGCGATTGGATGCTCGTAGGCGATGTCCCATGGGAGTAAGTTCGATCTTCTTTCTTTTATAGATTTCTCATAACGAAGCAATAAAAGAACCTTTCTAATCAAAAATTGAAATCCTTGAAACGTGCAGAATGTTCATCTGTTCTTGCAAAAGGCTGAGGATCATGAAAGGATCGGAAGCCAAAGGGCTTGGACGTTTATAAACTTCCATTGAAGCAACTTGACAGCTAACAAGAGAAGAATGTAAAGAACAAAGAGATTGTTTTTTGTTTTTTAGATCTTTTCATTCCAAAAATAATTTAGATCCAAATTGTATAGAGGGTTATCCATTATCCCATATACATTTGACACACTTTACTCAATCATACGACCAAAACCTATTTTGGGTTCGAGGATTTTGGAAATCGATTACTTTTTATACTCTGAATCTATACGCTTAAACTTTTGAATTTAGCCGTTTTTGATGTATCTGTCGAAGATTGGTGTGTGAAAGTCTTTGTATTTGTGTTCGAACTATTGTAACTCGTTATGTTTGTGAAATTCTTTGGATTGATTTGTAGGTTAACGATGTCATATGATATTGGAACCGTTCAAACAAACTCAAATTTCTTTGAGTTTGTTTAGACAAATAAGATCGAGTGGTTTTATTTTATCGGGATTTCTCTTTCTGTCTAGAAACTTAATAAGAAACTGTTAATCTTTGTC

mRNA sequence

CATAATATATTTTTAGTGGTAGGTAATATAAAATCCACTTTTATTTATTTATTTATTTATTTGTTGGTTTTAAATTTATGTAAATAATAAATGCAAAAAAGGAGACACGTGTCGAAATTTGTTTGGTAGAGTTCATGCAGACCATACCGTGCGGCTTTAACAATTATCCCCCTCCCATTCTATATATTCTCTTTCCATTGCAAACTTTCATTTCAACTCCAAAAATAGAAACTTTCTTCATAATTCTTTGCACTTCAATTTCCCTCTAATCTTCAAACACTTCAATTTCCAATCCTAATGGCTGTTTCTGATGACCGAGATCTCAACCTCCAAGCCACCGAGCTCCGCCTCGGCCTCCCTGGCTCCGACCAGCCCGACCACCGCTGCGGATCGCAGCCTAACAAGAGACCCTTTTCAGAGATTGATAAGGAAAATGACAGCCGTGTCTCGGATGTCGAGAATGGCTCCGATCCGAGCTCGCAACCTCCTCCCTCCAAAGCGCAAATTGTTGGATGGCCACCGGTTCGATCGTATCGAAAGAATTGTTTGGTTGGAAAGAAAAGCGAGGCGGAAAGTTGCAATGGAGGGTACGTGAAAGTGAGTATGGATGGGGCTCCATACTTGAGGAAGATCGATCTAACCATTTACAAAAGCTATGTGGAGCTCGTAAAGGCCTTGGAAAACATGTTCAACTTCAATCTTGTTAGTCTAATGATCGGTTCAACATCAGGCGGTTATTCTGAGAAGGAGGGTTTCAATGGATCCGATTACGTTCCAACATACGAAGATAAAGATAGCGATTGGATGCTCGTAGGCGATGTCCCATGGGAAATGTTCATCTGTTCTTGCAAAAGGCTGAGGATCATGAAAGGATCGGAAGCCAAAGGGCTTGGACGTTTATAAACTTCCATTGAAGCAACTTGACAGCTAACAAGAGAAGAATGTAAAGAACAAAGAGATTGTTTTTTGTTTTTTAGATCTTTTCATTCCAAAAATAATTTAGATCCAAATTGTATAGAGGGTTATCCATTATCCCATATACATTTGACACACTTTACTCAATCATACGACCAAAACCTATTTTGGGTTCGAGGATTTTGGAAATCGATTACTTTTTATACTCTGAATCTATACGCTTAAACTTTTGAATTTAGCCGTTTTTGATGTATCTGTCGAAGATTGGTGTGTGAAAGTCTTTGTATTTGTGTTCGAACTATTGTAACTCGTTATGTTTGTGAAATTCTTTGGATTGATTTGTAGGTTAACGATGTCATATGATATTGGAACCGTTCAAACAAACTCAAATTTCTTTGAGTTTGTTTAGACAAATAAGATCGAGTGGTTTTATTTTATCGGGATTTCTCTTTCTGTCTAGAAACTTAATAAGAAACTGTTAATCTTTGTC

Coding sequence (CDS)

ATGGCTGTTTCTGATGACCGAGATCTCAACCTCCAAGCCACCGAGCTCCGCCTCGGCCTCCCTGGCTCCGACCAGCCCGACCACCGCTGCGGATCGCAGCCTAACAAGAGACCCTTTTCAGAGATTGATAAGGAAAATGACAGCCGTGTCTCGGATGTCGAGAATGGCTCCGATCCGAGCTCGCAACCTCCTCCCTCCAAAGCGCAAATTGTTGGATGGCCACCGGTTCGATCGTATCGAAAGAATTGTTTGGTTGGAAAGAAAAGCGAGGCGGAAAGTTGCAATGGAGGGTACGTGAAAGTGAGTATGGATGGGGCTCCATACTTGAGGAAGATCGATCTAACCATTTACAAAAGCTATGTGGAGCTCGTAAAGGCCTTGGAAAACATGTTCAACTTCAATCTTGTTAGTCTAATGATCGGTTCAACATCAGGCGGTTATTCTGAGAAGGAGGGTTTCAATGGATCCGATTACGTTCCAACATACGAAGATAAAGATAGCGATTGGATGCTCGTAGGCGATGTCCCATGGGAAATGTTCATCTGTTCTTGCAAAAGGCTGAGGATCATGAAAGGATCGGAAGCCAAAGGGCTTGGACGTTTATAA

Protein sequence

MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPSSQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSYVELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCKRLRIMKGSEAKGLGRL

Homology

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BLAST of CmoCh08G003010 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.3e-62
Identity = 123/199 (61.81%), Postives = 144/199 (72.36%), Query Frame = 0


Query: 4   SDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPSSQP 63
           S +++LNL+ATELRLGLPGSD+P+ R  ++ NKR   E   E       + NGSD + + 
Sbjct: 7   SYEKELNLKATELRLGLPGSDEPEKRATARSNKRSSPEASDE-----ESISNGSDVTKED 66

Query: 64  ---PPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 123
              PP+KAQ+VGWPP+RSYRKN +  KK E    NG YVKVSM GAPYLRKIDL +YKSY
Sbjct: 67  NVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESEGNGMYVKVSMAGAPYLRKIDLKVYKSY 126

Query: 124 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 183
            EL+KALENMF             G YSE+EG+NGS+Y PTYEDKD DWMLVGDVPW MF
Sbjct: 127 PELLKALENMFK---------CIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMF 186

Query: 184 ICSCKRLRIMKGSEAKGLG 200
           + SCKRLRIMKGSEAKGLG
Sbjct: 187 VSSCKRLRIMKGSEAKGLG 191

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BLAST of CmoCh08G003010 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-56
Identity = 119/194 (61.34%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 6   DRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPSSQPPP 65
           D  +NL+ATELRLGLPG+++    CG + NKR   E  ++        E  S       P
Sbjct: 8   DELVNLKATELRLGLPGTEE-TVSCG-KSNKRVLPEATEKEIESTGKTETAS-------P 67

Query: 66  SKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSYVELVK 125
            KAQIVGWPPVRSYRKN +  KKSE+E   G YVKVSMDGAPYLRKIDLT+YK Y EL+K
Sbjct: 68  PKAQIVGWPPVRSYRKNNVQTKKSESEG-QGNYVKVSMDGAPYLRKIDLTMYKQYPELMK 127

Query: 126 ALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCK 185
           +LENMF F++         G Y E+EG+ GSD+VPTYEDKD DWMLVGDVPWEMF+ SCK
Sbjct: 128 SLENMFKFSV---------GEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCK 182

Query: 186 RLRIMKGSEAKGLG 200
           RLRIMKGSE KGLG
Sbjct: 188 RLRIMKGSEVKGLG 182

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BLAST of CmoCh08G003010 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.7e-56
Identity = 119/200 (59.50%), Postives = 141/200 (70.50%), Query Frame = 0


Query: 6   DRDLNLQATELRLGLPGSD-----QPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 65
           D  +NL+ TELRLGLPG+D     +    C +  NKR  S  D E      ++E+ S  +
Sbjct: 2   DEFVNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLS-TDTE-----KEIESSSRKT 61

Query: 66  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAE-SCNGGYVKVSMDGAPYLRKIDLTIYKS 125
              PP KAQIVGWPPVRSYRKN +  KK+E+E    G YVKVSMDGAPYLRKIDL+ YK 
Sbjct: 62  ETSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKG 121

Query: 126 YVELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEM 185
           Y EL+KALE MF F++         G Y E++G+ GSD+VPTYEDKD DWML+GDVPWEM
Sbjct: 122 YSELLKALEVMFKFSV---------GEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEM 181

Query: 186 FICSCKRLRIMKGSEAKGLG 200
           FIC+CKRLRIMKGSEAKGLG
Sbjct: 182 FICTCKRLRIMKGSEAKGLG 186

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BLAST of CmoCh08G003010 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.2e-55
Identity = 119/210 (56.67%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 4   SDDRDLNLQATELRLGLPGSDQPDHR---CGS---QPNKRPFSEIDKEN-----DSRVSD 63
           S + +LNL+ATELRLGLPGSD+P  +    GS     NKR   E+++       +S  SD
Sbjct: 3   SYETELNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDSSD 62

Query: 64  VENGSDPSSQP-PPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRK 123
               SD +     P+K Q+VGWPP+RS+RKN L  KK E     G Y+KVSM GAPYLRK
Sbjct: 63  STTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYLKVSMAGAPYLRK 122

Query: 124 IDLTIYKSYVELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWML 183
           IDL +YKSY EL+KAL+N+F           T G YSE+EG+NGS+Y PTYEDKD DWML
Sbjct: 123 IDLKVYKSYPELLKALQNLFK---------CTFGEYSEREGYNGSEYAPTYEDKDGDWML 182

Query: 184 VGDVPWEMFICSCKRLRIMKGSEAKGLGRL 202
           VGDVPW MF+ SCKRLRI+KGSEAKGLG L
Sbjct: 183 VGDVPWNMFVSSCKRLRIIKGSEAKGLGCL 203

[Close]

BLAST of CmoCh08G003010 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-50
Identity = 111/201 (55.22%), Postives = 137/201 (68.16%), Query Frame = 0


Query: 6   DRDLNLQATELRLGLPGSDQPDH-----RCGSQPNKRPFSEI--DKENDSRVSDVENGSD 65
           + DLNL+ATELRLGLPG+++ +          + NKR   E   D  + S+ S  +   +
Sbjct: 8   ESDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKASHHQQHVE 67

Query: 66  PSSQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYK 125
             S PPP KA+IVGWPP+RSYRKN +     E E  +G +VKVSMDGAPYLRK+DL +Y 
Sbjct: 68  TVSAPPP-KAKIVGWPPIRSYRKNSV----QEGEG-DGIFVKVSMDGAPYLRKVDLKVYG 127

Query: 126 SYVELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWE 185
            Y EL+KALE MF   +         G YSE+EG+ GS+Y PTYEDKD DWMLVGDVPW+
Sbjct: 128 GYPELLKALETMFKLAI---------GEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWD 187

Query: 186 MFICSCKRLRIMKGSEAKGLG 200
           MF+ SCKRLRIMKGSEA+GLG
Sbjct: 188 MFVTSCKRLRIMKGSEARGLG 193

[Close]

BLAST of CmoCh08G003010 vs. ExPASy TrEMBL
Match: A0A6J1H897 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461039 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.2e-105
Identity = 192/201 (95.52%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60
           MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60

Query: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120
           SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY
Sbjct: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120

Query: 121 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180
           VELVKALENMFNFNL         GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF
Sbjct: 121 VELVKALENMFNFNL---------GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180

Query: 181 ICSCKRLRIMKGSEAKGLGRL 202
           ICSCKRLRIMKGSEAKGLGRL
Sbjct: 181 ICSCKRLRIMKGSEAKGLGRL 192

[Close]

BLAST of CmoCh08G003010 vs. ExPASy TrEMBL
Match: A0A6J1KRM5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111497647 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 185/201 (92.04%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60
           +AVSDDRDLNLQATELRLGLPGSDQPD RCGSQPNKRPFSEIDKENDSRVSD ENGSD S
Sbjct: 4   LAVSDDRDLNLQATELRLGLPGSDQPDRRCGSQPNKRPFSEIDKENDSRVSDAENGSDQS 63

Query: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120
           SQPPPSK QIVGWPP+RSYRKNCL GKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY
Sbjct: 64  SQPPPSKGQIVGWPPIRSYRKNCLAGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 123

Query: 121 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180
           VELVKALENMFNFNL         GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF
Sbjct: 124 VELVKALENMFNFNL---------GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 183

Query: 181 ICSCKRLRIMKGSEAKGLGRL 202
           ICSCKRLRIMKGSEAKGLGRL
Sbjct: 184 ICSCKRLRIMKGSEAKGLGRL 195

[Close]

BLAST of CmoCh08G003010 vs. ExPASy TrEMBL
Match: A0A0A0K770 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G378530 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.4e-81
Identity = 157/200 (78.50%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 2   AVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPSS 61
           A SD  DLN QATELRLGLPGSD  + R  S+ NKRPFSEIDKEN+S VSDV N  D +S
Sbjct: 6   ASSDHPDLNFQATELRLGLPGSDDTNRRTESKSNKRPFSEIDKENNSSVSDVGNHIDQTS 65

Query: 62  QPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSYV 121
           QPPPSKAQ+VGWPPVRSYRKNCL  KKSE ES +GGYVKVSMDGAPYLRKIDLT+YKSY 
Sbjct: 66  QPPPSKAQVVGWPPVRSYRKNCLAVKKSEIESSSGGYVKVSMDGAPYLRKIDLTVYKSYT 125

Query: 122 ELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFI 181
           +LVKALENMF FNL         GGYSE+EGFNGSDYVPTYEDKD DWMLVGDVPWEMFI
Sbjct: 126 DLVKALENMFKFNL---------GGYSEREGFNGSDYVPTYEDKDGDWMLVGDVPWEMFI 185

Query: 182 CSCKRLRIMKGSEAKGLGRL 202
            SCKRLRIMKGSEA+GLG L
Sbjct: 186 SSCKRLRIMKGSEARGLGCL 196

[Close]

BLAST of CmoCh08G003010 vs. ExPASy TrEMBL
Match: A0A6J1DQE7 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111022852 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 156/200 (78.00%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGS-DQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDP 60
           +AVSD RDLNL+ATELRLGLPGS D+PDHR GSQ NKRPFSEIDKE+ S +SD  N    
Sbjct: 4   LAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN---- 63

Query: 61  SSQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKS 120
            S PPPSKAQ+VGWPP+RSYRKN L GKK+E ESC+  YVKVSMDGAPYLRK+DLTIYKS
Sbjct: 64  DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKS 123

Query: 121 YVELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEM 180
           YVELVKALENMF FNL         G YSEKEGFNGSDY PTYEDKD DWMLVGDVPWEM
Sbjct: 124 YVELVKALENMFKFNL---------GDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEM 183

Query: 181 FICSCKRLRIMKGSEAKGLG 200
           FI SCKRLRIMKGSEA+GLG
Sbjct: 184 FISSCKRLRIMKGSEARGLG 190

[Close]

BLAST of CmoCh08G003010 vs. ExPASy TrEMBL
Match: A0A5A7UYH3 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00540 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.0e-79
Identity = 157/201 (78.11%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 2   AVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPSS 61
           A SD  DLN QATELRLGLPGSD+PD R  S+ NKRPFSEIDKE++S +S+  N  D +S
Sbjct: 6   ASSDHPDLNFQATELRLGLPGSDEPDRRTESKSNKRPFSEIDKESNSSISNNGNCLDQTS 65

Query: 62  QPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSYV 121
           QPPPSKAQ+VGWPPVRSYRKN L GKKSE ES +GGYVKVSMDGAPYLRKIDLTIYKSY 
Sbjct: 66  QPPPSKAQVVGWPPVRSYRKNYLAGKKSETESSSGGYVKVSMDGAPYLRKIDLTIYKSYT 125

Query: 122 ELVKALENMFNFNLVSLMIGSTSGGYSEKEGF-NGSDYVPTYEDKDSDWMLVGDVPWEMF 181
           ELVKALENMF FNL         GGYSEKEGF NGSDY PTYEDKD DWMLVGDVPWEMF
Sbjct: 126 ELVKALENMFKFNL---------GGYSEKEGFNNGSDYAPTYEDKDGDWMLVGDVPWEMF 185

Query: 182 ICSCKRLRIMKGSEAKGLGRL 202
           I SCKRLRIMKGSEA+GLG L
Sbjct: 186 ISSCKRLRIMKGSEARGLGCL 197

[Close]

BLAST of CmoCh08G003010 vs. NCBI nr
Match: XP_022960238.1 (auxin-induced protein 22D-like [Cucurbita moschata])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 192/201 (95.52%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60
           MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60

Query: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120
           SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY
Sbjct: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120

Query: 121 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180
           VELVKALENMFNFNL         GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF
Sbjct: 121 VELVKALENMFNFNL---------GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180

Query: 181 ICSCKRLRIMKGSEAKGLGRL 202
           ICSCKRLRIMKGSEAKGLGRL
Sbjct: 181 ICSCKRLRIMKGSEAKGLGRL 192

[Close]

BLAST of CmoCh08G003010 vs. NCBI nr
Match: KAG6593083.1 (Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 188/201 (93.53%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60
           MAVSDDRDLNLQATELRLGLPGSDQPD RCGSQPNKRPFSEIDKENDSRV DV+NGSD S
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGSDQPDRRCGSQPNKRPFSEIDKENDSRVLDVKNGSDQS 60

Query: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120
           SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY
Sbjct: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120

Query: 121 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180
           VELVKALENMFNFNL         GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF
Sbjct: 121 VELVKALENMFNFNL---------GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180

Query: 181 ICSCKRLRIMKGSEAKGLGRL 202
           ICSCKRLRIMKGSEAKGLGRL
Sbjct: 181 ICSCKRLRIMKGSEAKGLGRL 192

[Close]

BLAST of CmoCh08G003010 vs. NCBI nr
Match: XP_023513502.1 (auxin-induced protein 22D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-101
Identity = 187/201 (93.03%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60
           MAVSDDRDLNLQATELRLGLPGSDQPD RCGSQPNKRPFSEIDKENDSRVSD ENGSD S
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGSDQPDRRCGSQPNKRPFSEIDKENDSRVSDAENGSDQS 60

Query: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120
           SQPPPSKAQIVGWPPVRSYRKNCL GKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY
Sbjct: 61  SQPPPSKAQIVGWPPVRSYRKNCLAGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120

Query: 121 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180
           VELVKALENMFNFNL         GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF
Sbjct: 121 VELVKALENMFNFNL---------GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180

Query: 181 ICSCKRLRIMKGSEAKGLGRL 202
           ICSCKRLRIMKGSEAKG+GRL
Sbjct: 181 ICSCKRLRIMKGSEAKGVGRL 192

[Close]

BLAST of CmoCh08G003010 vs. NCBI nr
Match: XP_023004261.1 (auxin-induced protein 22D-like [Cucurbita maxima])

HSP 1 Score: 377.9 bits (969), Expect = 5.6e-101
Identity = 185/201 (92.04%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60
           +AVSDDRDLNLQATELRLGLPGSDQPD RCGSQPNKRPFSEIDKENDSRVSD ENGSD S
Sbjct: 4   LAVSDDRDLNLQATELRLGLPGSDQPDRRCGSQPNKRPFSEIDKENDSRVSDAENGSDQS 63

Query: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120
           SQPPPSK QIVGWPP+RSYRKNCL GKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY
Sbjct: 64  SQPPPSKGQIVGWPPIRSYRKNCLAGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 123

Query: 121 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 180
           VELVKALENMFNFNL         GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF
Sbjct: 124 VELVKALENMFNFNL---------GGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMF 183

Query: 181 ICSCKRLRIMKGSEAKGLGRL 202
           ICSCKRLRIMKGSEAKGLGRL
Sbjct: 184 ICSCKRLRIMKGSEAKGLGRL 195

[Close]

BLAST of CmoCh08G003010 vs. NCBI nr
Match: KAG7025492.1 (Auxin-induced protein AUX28 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 161/171 (94.15%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60
           MAVSDDRDLNLQATELRLGLPGSDQPD RCGSQPNKRPFSEIDKENDSRVSDVENGSDPS
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGSDQPDRRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 60

Query: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120
           SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY
Sbjct: 61  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSY 120

Query: 121 VELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWML 172
           VELVKALENMFNFNL         GGYSEKEGFNGSDYVPTYEDKDSDWML
Sbjct: 121 VELVKALENMFNFNL---------GGYSEKEGFNGSDYVPTYEDKDSDWML 162

[Close]

BLAST of CmoCh08G003010 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57
Identity = 119/194 (61.34%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 6   DRDLNLQATELRLGLPGSDQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPSSQPPP 65
           D  +NL+ATELRLGLPG+++    CG + NKR   E  ++        E  S       P
Sbjct: 8   DELVNLKATELRLGLPGTEE-TVSCG-KSNKRVLPEATEKEIESTGKTETAS-------P 67

Query: 66  SKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSYVELVK 125
            KAQIVGWPPVRSYRKN +  KKSE+E   G YVKVSMDGAPYLRKIDLT+YK Y EL+K
Sbjct: 68  PKAQIVGWPPVRSYRKNNVQTKKSESEG-QGNYVKVSMDGAPYLRKIDLTMYKQYPELMK 127

Query: 126 ALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCK 185
           +LENMF F++         G Y E+EG+ GSD+VPTYEDKD DWMLVGDVPWEMF+ SCK
Sbjct: 128 SLENMFKFSV---------GEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCK 182

Query: 186 RLRIMKGSEAKGLG 200
           RLRIMKGSE KGLG
Sbjct: 188 RLRIMKGSEVKGLG 182

[Close]

BLAST of CmoCh08G003010 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-57
Identity = 119/200 (59.50%), Postives = 141/200 (70.50%), Query Frame = 0


Query: 6   DRDLNLQATELRLGLPGSD-----QPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPS 65
           D  +NL+ TELRLGLPG+D     +    C +  NKR  S  D E      ++E+ S  +
Sbjct: 2   DEFVNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLS-TDTE-----KEIESSSRKT 61

Query: 66  SQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAE-SCNGGYVKVSMDGAPYLRKIDLTIYKS 125
              PP KAQIVGWPPVRSYRKN +  KK+E+E    G YVKVSMDGAPYLRKIDL+ YK 
Sbjct: 62  ETSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKG 121

Query: 126 YVELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEM 185
           Y EL+KALE MF F++         G Y E++G+ GSD+VPTYEDKD DWML+GDVPWEM
Sbjct: 122 YSELLKALEVMFKFSV---------GEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEM 181

Query: 186 FICSCKRLRIMKGSEAKGLG 200
           FIC+CKRLRIMKGSEAKGLG
Sbjct: 182 FICTCKRLRIMKGSEAKGLG 186

[Close]

BLAST of CmoCh08G003010 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 191.8 bits (486), Expect = 5.3e-49
Identity = 110/190 (57.89%), Postives = 124/190 (65.26%), Query Frame = 0


Query: 9   LNLQATELRLGLPGS---DQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDPSSQPPP 68
           LNL+ TELRLGLPG+    Q +  C    NKR      K ND         S   S PPP
Sbjct: 7   LNLKDTELRLGLPGAQEEQQLELSCVRSNNKR------KNND---------STEESAPPP 66

Query: 69  SKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKSYVELVK 128
           +K QIVGWPPVRS RKN          + N  YVKVSMDGAPYLRKIDL +YK+Y EL+K
Sbjct: 67  AKTQIVGWPPVRSNRKN--------NNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLK 126

Query: 129 ALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCK 188
           ALENMF F         T G YSE+EG+ GS +VPTYEDKD DWMLVGDVPW+MF  SC+
Sbjct: 127 ALENMFKF---------TVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQ 164

Query: 189 RLRIMKGSEA 196
           +LRIMKGSEA
Sbjct: 187 KLRIMKGSEA 164

[Close]

BLAST of CmoCh08G003010 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 184.9 bits (468), Expect = 6.4e-47
Identity = 108/203 (53.20%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 1   MAVSDDRDLNLQATELRLGLPG-----SDQPDHRCGSQPNKRPFSEIDKENDSRVSDVEN 60
           MA     +LNL+ TEL LGLPG      ++ +  C    NKR F E   E +S       
Sbjct: 1   MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEES------- 60

Query: 61  GSDPSSQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLT 120
                   PP+K QIVGWPPVRS RKN          + +  YVKVSMDGAPYLRKIDL 
Sbjct: 61  -------TPPTKTQIVGWPPVRSSRKN----------NNSVSYVKVSMDGAPYLRKIDLK 120

Query: 121 IYKSYVELVKALENMFNFNLVSLMIGSTSGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDV 180
            YK+Y EL+KALENMF      +MIG     Y E+EG+ GS +VPTYEDKD DWMLVGDV
Sbjct: 121 TYKNYPELLKALENMF-----KVMIGE----YCEREGYKGSGFVPTYEDKDGDWMLVGDV 170

Query: 181 PWEMFICSCKRLRIMKGSEAKGL 199
           PW+MF  SCKRLRIMKGS+A  L
Sbjct: 181 PWDMFSSSCKRLRIMKGSDAPAL 170

[Close]

BLAST of CmoCh08G003010 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 181.4 bits (459), Expect = 7.1e-46
Identity = 113/232 (48.71%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 9   LNLQATELRLGLPGSDQPDHRCGSQPNKRPFSE-ID-KENDSRVS-------DVENGSDP 68
           +N +ATELRLGLPG +      G    KR FSE +D K N S  +       D+EN  + 
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 69  SSQPPPSKAQIVGWPPVRSYRKNCLVGKK--------------------SEAESC-NGGY 128
             + PP+KAQ+VGWPPVRS+RKN + G+K                    S A +C    Y
Sbjct: 62  VVK-PPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAY 121

Query: 129 VKVSMDGAPYLRKIDLTIYKSYVELVKALENMFNFNLVSLMIGSTSGGYSEK-------- 188
           VKVSMDGAPYLRKIDL +YK+Y +L  AL  MF+          T G Y  +        
Sbjct: 122 VKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFS--------SFTIGNYGPQGMKDFMNE 181

Query: 189 ----EGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCKRLRIMKGSEAKGL 199
               +  NGSDYVPTYEDKD DWMLVGDVPWEMF+ SCKR+RIMKGSEA GL
Sbjct: 182 SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

The following BLAST results are available for this feature:

BLAST of CmoCh08G003010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24542	5.3e-62	61.81	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
P33077	1.5e-56	61.34	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
Q38822	5.7e-56	59.50	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
O24543	8.2e-55	56.67	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]
P32294	1.6e-50	55.22	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]

BLAST of CmoCh08G003010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H897	5.2e-105	95.52	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461039 PE=3 SV=1	[more]
A0A6J1KRM5	2.7e-101	92.04	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111497647 PE=3 SV=1	[more]
A0A0A0K770	2.4e-81	78.50	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G378530 PE=3 SV=1	[more]
A0A6J1DQE7	1.2e-80	78.00	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111022852 PE=3 SV=...	[more]
A0A5A7UYH3	1.0e-79	78.11	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CmoCh08G003010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960238.1	1.1e-104	95.52	auxin-induced protein 22D-like [Cucurbita moschata]	[more]
KAG6593083.1	1.1e-101	93.53	Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023513502.1	1.5e-101	93.03	auxin-induced protein 22D-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004261.1	5.6e-101	92.04	auxin-induced protein 22D-like [Cucurbita maxima]	[more]
KAG7025492.1	1.2e-84	94.15	Auxin-induced protein AUX28 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh08G003010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	1.1e-57	61.34	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	4.0e-57	59.50	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	5.3e-49	57.89	indole-3-acetic acid inducible	[more]
AT3G23030.1	6.4e-47	53.20	indole-3-acetic acid inducible 2	[more]
AT3G04730.1	7.1e-46	48.71	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 33..199 e-value: 3.5E-61 score: 207.1
None	No IPR available	GENE3D	3.10.20.90		coord: 90..200 e-value: 3.2E-41 score: 141.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 1..199
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 95..191
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..199
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 96..192 score: 22.408772

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G003010.1	CmoCh08G003010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding