CmoCh08G001530 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G001530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor ERF039-like
Location	Cmo_Chr08: 893386 .. 893970 (+)
RNA-Seq Expression	CmoCh08G001530
Synteny	CmoCh08G001530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACAAACTCCCACCATTCTCAACCCACCACCACCTCCTCCGCCTCTTCTTCCGCCTCTTCCTCCGGCGAGAACGGCCGAAAGAGGCCGAGGGGTACGACGATGAGCAACATAGAGAGCGAGAGCGAATCGAGCCACTCAACGAGGAAGTACAGAGGGGTTCGTCGGAGAGCGTGGGGAAAATGGGTGTCCGAAATAAGGGAGCCAAGGAAGAAATCAAGGATATGGCTCGGTACATACTCGACCGCGGAGATGGCGGCACGAGCACACGACGCGGCGGCTCTTGCCATCAAAGGCTGTGGTGCATTCCTCAACTTCCCTGAACTCAAACACCAACTCCCCCGCCCTGCCTCCCTCTCCGCCAAGGACATCCAGGCCGCCGCCGCAGACGCAGCCACCCTCAAACCACCAATGGCGGAGGAGGAGGAGGAGGAGGAAGAGACGTGGTTTGATTTGCCGGATCTTGTGGTCGGAGGGAGTGATGGGCTGCTGCTGGCCGGCTATGATTCGCCGTGGCAGTTCGGTGGAGATCAACAACATTCATGGCATTGGGACTCTTATTCTCATACTATTCTTCCTTGA

mRNA sequence

ATGAACACAAACTCCCACCATTCTCAACCCACCACCACCTCCTCCGCCTCTTCTTCCGCCTCTTCCTCCGGCGAGAACGGCCGAAAGAGGCCGAGGGGTACGACGATGAGCAACATAGAGAGCGAGAGCGAATCGAGCCACTCAACGAGGAAGTACAGAGGGGTTCGTCGGAGAGCGTGGGGAAAATGGGTGTCCGAAATAAGGGAGCCAAGGAAGAAATCAAGGATATGGCTCGGTACATACTCGACCGCGGAGATGGCGGCACGAGCACACGACGCGGCGGCTCTTGCCATCAAAGGCTGTGGTGCATTCCTCAACTTCCCTGAACTCAAACACCAACTCCCCCGCCCTGCCTCCCTCTCCGCCAAGGACATCCAGGCCGCCGCCGCAGACGCAGCCACCCTCAAACCACCAATGGCGGAGGAGGAGGAGGAGGAGGAAGAGACGTGGTTTGATTTGCCGGATCTTGTGGTCGGAGGGAGTGATGGGCTGCTGCTGGCCGGCTATGATTCGCCGTGGCAGTTCGGTGGAGATCAACAACATTCATGGCATTGGGACTCTTATTCTCATACTATTCTTCCTTGA

Coding sequence (CDS)

ATGAACACAAACTCCCACCATTCTCAACCCACCACCACCTCCTCCGCCTCTTCTTCCGCCTCTTCCTCCGGCGAGAACGGCCGAAAGAGGCCGAGGGGTACGACGATGAGCAACATAGAGAGCGAGAGCGAATCGAGCCACTCAACGAGGAAGTACAGAGGGGTTCGTCGGAGAGCGTGGGGAAAATGGGTGTCCGAAATAAGGGAGCCAAGGAAGAAATCAAGGATATGGCTCGGTACATACTCGACCGCGGAGATGGCGGCACGAGCACACGACGCGGCGGCTCTTGCCATCAAAGGCTGTGGTGCATTCCTCAACTTCCCTGAACTCAAACACCAACTCCCCCGCCCTGCCTCCCTCTCCGCCAAGGACATCCAGGCCGCCGCCGCAGACGCAGCCACCCTCAAACCACCAATGGCGGAGGAGGAGGAGGAGGAGGAAGAGACGTGGTTTGATTTGCCGGATCTTGTGGTCGGAGGGAGTGATGGGCTGCTGCTGGCCGGCTATGATTCGCCGTGGCAGTTCGGTGGAGATCAACAACATTCATGGCATTGGGACTCTTATTCTCATACTATTCTTCCTTGA

Protein sequence

MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASLSAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQQHSWHWDSYSHTILP

Homology

[Close]

BLAST of CmoCh08G001530 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-30
Identity = 95/226 (42.04%), Postives = 115/226 (50.88%), Query Frame = 0


Query: 11  TTTSSASSSASSSGENGRKRPRGTTMSN-------IESESESSHSTRKYRGVRRRAWGKW 70
           T T S+SS  +SS ++     R     N         + S+ + +   YRGVR R+WGKW
Sbjct: 23  TATISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKW 82

Query: 71  VSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASLSAK 130
           VSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG   FLNFPEL   LPRP S S K
Sbjct: 83  VSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPK 142

Query: 131 DIQAA---AADAATLKPPMAE------------------------------------EEE 187
           DIQAA   AA+A T   P+ +                                    ++E
Sbjct: 143 DIQAAATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKE 202

[Close]

BLAST of CmoCh08G001530 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-29
Identity = 66/84 (78.57%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           YRGVR R WGKWVSEIREPRKKSRIWLGT+ST EMAARAHDAAAL IKG  A LNFPEL 
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 112 HQLPRPASLSAKDIQAAAADAATL 136
             LPRPAS S +D+QAAAA AA +
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAAM 126

[Close]

BLAST of CmoCh08G001530 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-29
Identity = 66/82 (80.49%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           +RGVR R WGKWVSEIREP+KKSRIWLGT+STAEMAARAHD AALAIKG  A LNFPEL 
Sbjct: 45  FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELA 104

Query: 112 HQLPRPASLSAKDIQAAAADAA 134
           + LPRPAS   KDIQAAAA AA
Sbjct: 105 YHLPRPASADPKDIQAAAAAAA 126

[Close]

BLAST of CmoCh08G001530 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29
Identity = 67/101 (66.34%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 35  TMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAA 94
           T  + + + E +     YRG R R+WGKWVSEIREPRKKSRIWLGT+ TAEMAARAHD A
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 95  ALAIKGCGAFLNFPELKHQLPRPASLSAKDIQAAAADAATL 136
           AL+IKG  A LNFPEL   LPRP SLS +DIQAAAA+AA +
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]

BLAST of CmoCh08G001530 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 9.7e-29
Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 8   SQPTTTSSASSSASSS---GENGRKRPRGTTMSNIESESESSHST------RK------- 67
           S PTT+SS+SSS +S+    +N +++    ++S++ S  +           RK       
Sbjct: 38  SSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKH 97

Query: 68  --YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPE 127
             YRGVR R+WGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  A+LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 128 LKHQLPRPASLSAKDIQAAAADAA 134
           L  +LPRP + S KDIQAAA+ AA
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAA 181

[Close]

BLAST of CmoCh08G001530 vs. ExPASy TrEMBL
Match: A0A6J1H5C9 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111460715 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.2e-103
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW
Sbjct: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQQ 180
           SAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQQ
Sbjct: 121 SAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQQ 180

Query: 181 HSWHWDSYSHTILP 195
           HSWHWDSYSHTILP
Sbjct: 181 HSWHWDSYSHTILP 194

[Close]

BLAST of CmoCh08G001530 vs. ExPASy TrEMBL
Match: A0A6J1KUE1 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111497717 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 8.7e-97
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGT-TMSNIESESESSHSTRKYRGVRRRA 60
           MNTNSHHSQPTTTSSASSS SSSG+N +KRPRGT T SNIESESESSH TRKYRGVRRRA
Sbjct: 1   MNTNSHHSQPTTTSSASSSTSSSGDNSQKRPRGTMTTSNIESESESSHLTRKYRGVRRRA 60

Query: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120
           WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS
Sbjct: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120

Query: 121 LSAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQ 180
           LSAKDIQAAAADAATLKPPM EEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQ
Sbjct: 121 LSAKDIQAAAADAATLKPPMEEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQ 180

Query: 181 QHSWHWDSYSHTILP 195
           Q+SWHWDSYSHTILP
Sbjct: 181 QNSWHWDSYSHTILP 195

[Close]

BLAST of CmoCh08G001530 vs. ExPASy TrEMBL
Match: A0A0A0KAN0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.7e-50
Identity = 134/220 (60.91%), Postives = 146/220 (66.36%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           M TNSHHS  TT+SSA S  +++    RKR R +T S  ESES+   ST K+RGVR RAW
Sbjct: 1   MTTNSHHS--TTSSSAVSCLTAT---SRKRQRSSTSSATESESDQESSTPKFRGVRLRAW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFP+LKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLKPPMAE---------EEEEEEETWFDLPDLVVGGSDGLLL----- 180
           SAKDIQAAAA AA LK              EEEEEE TWFDLPDL+V  S+G LL     
Sbjct: 121 SAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV--SNGFLLGLDEN 180

Query: 181 --------AGYDSPWQF----GGDQQHSWHWDSYSHTILP 195
                   +   S WQF      D    WH D +SHTI P
Sbjct: 181 YSSSCSSSSSSSSSWQFLVDDHEDNHFQWHSD-FSHTIFP 212

[Close]

BLAST of CmoCh08G001530 vs. ExPASy TrEMBL
Match: A0A5A7TVV7 (Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73575G00010 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.3e-49
Identity = 132/214 (61.68%), Postives = 144/214 (67.29%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           M TNSHHS  TT+SSA++S        RKR R +T S  ESES+   ST K+RGVR R W
Sbjct: 1   MTTNSHHS--TTSSSATTS--------RKRQRSSTSSATESESDQEISTPKFRGVRLRTW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFP+LKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLK--PPMAE--EEEEEEETWFDLPDLVVGGSDGLLL---------- 180
           SAKDIQAAAA AA LK  P  A     EEEE TWFDLPDL+V  S+G LL          
Sbjct: 121 SAKDIQAAAAQAAALKHEPETATSCRGEEEESTWFDLPDLIV--SNGFLLGLDENYSSSC 180

Query: 181 --AGYDSPWQF----GGDQQHSWHWDSYSHTILP 195
             +   + WQF      D    WH D +SHTI P
Sbjct: 181 SSSSSSTSWQFLVDDHEDNHFQWHSD-FSHTIFP 201

[Close]

BLAST of CmoCh08G001530 vs. ExPASy TrEMBL
Match: A0A1S3CBH6 (ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=LOC103499073 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.3e-49
Identity = 132/214 (61.68%), Postives = 144/214 (67.29%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           M TNSHHS  TT+SSA++S        RKR R +T S  ESES+   ST K+RGVR R W
Sbjct: 1   MTTNSHHS--TTSSSATTS--------RKRQRSSTSSATESESDQEISTPKFRGVRLRTW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFP+LKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLK--PPMAE--EEEEEEETWFDLPDLVVGGSDGLLL---------- 180
           SAKDIQAAAA AA LK  P  A     EEEE TWFDLPDL+V  S+G LL          
Sbjct: 121 SAKDIQAAAAQAAALKHEPETATSCRGEEEESTWFDLPDLIV--SNGFLLGLDENYSSSC 180

Query: 181 --AGYDSPWQF----GGDQQHSWHWDSYSHTILP 195
             +   + WQF      D    WH D +SHTI P
Sbjct: 181 SSSSSSTSWQFLVDDHEDNHFQWHSD-FSHTIFP 201

[Close]

BLAST of CmoCh08G001530 vs. NCBI nr
Match: XP_022959732.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW
Sbjct: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQQ 180
           SAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQQ
Sbjct: 121 SAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQQ 180

Query: 181 HSWHWDSYSHTILP 195
           HSWHWDSYSHTILP
Sbjct: 181 HSWHWDSYSHTILP 194

[Close]

BLAST of CmoCh08G001530 vs. NCBI nr
Match: KAG7025350.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.9 bits (938), Expect = 2.1e-97
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRG-TTMSNIESESESSHSTRKYRGVRRRA 60
           MNTNSHHSQPTTTSSASSSASSSGEN RKRPRG TT SNIESESESSHSTRKYRGVRRRA
Sbjct: 1   MNTNSHHSQPTTTSSASSSASSSGENSRKRPRGTTTTSNIESESESSHSTRKYRGVRRRA 60

Query: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120
           WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS
Sbjct: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120

Query: 121 LSAKDIQAAAADAATLKPPMA---EEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFG 180
           LSAKDIQAAAADAATLKPPMA   EEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFG
Sbjct: 121 LSAKDIQAAAADAATLKPPMAEEEEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFG 180

Query: 181 GDQQHSWHWDSYSHTILP 195
           GDQQ+SWHWDSYSHTILP
Sbjct: 181 GDQQNSWHWDSYSHTILP 198

[Close]

BLAST of CmoCh08G001530 vs. NCBI nr
Match: XP_023004375.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita maxima])

HSP 1 Score: 362.8 bits (930), Expect = 1.8e-96
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGT-TMSNIESESESSHSTRKYRGVRRRA 60
           MNTNSHHSQPTTTSSASSS SSSG+N +KRPRGT T SNIESESESSH TRKYRGVRRRA
Sbjct: 1   MNTNSHHSQPTTTSSASSSTSSSGDNSQKRPRGTMTTSNIESESESSHLTRKYRGVRRRA 60

Query: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120
           WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS
Sbjct: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120

Query: 121 LSAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQ 180
           LSAKDIQAAAADAATLKPPM EEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQ
Sbjct: 121 LSAKDIQAAAADAATLKPPMEEEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGGDQ 180

Query: 181 QHSWHWDSYSHTILP 195
           Q+SWHWDSYSHTILP
Sbjct: 181 QNSWHWDSYSHTILP 195

[Close]

BLAST of CmoCh08G001530 vs. NCBI nr
Match: XP_023515152.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 5.2e-96
Identity = 190/197 (96.45%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRG-TTMSNIESESESSHSTRKYRGVRRRA 60
           MNTNSHHSQPTTTSSASSSASSSGEN RKRPRG TT SNIESESESSHSTRKYRGVRRRA
Sbjct: 1   MNTNSHHSQPTTTSSASSSASSSGENRRKRPRGTTTTSNIESESESSHSTRKYRGVRRRA 60

Query: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120
           WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS
Sbjct: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120

Query: 121 LSAKDIQAAAADAATLKPPMA--EEEEEEEETWFDLPDLVVGGSDGLLLAGYDSPWQFGG 180
           LSAKDIQAAAADAATLKPPMA  EEEEEEEETWFDLPDLVVGGSDGLLLA YDSPWQFGG
Sbjct: 121 LSAKDIQAAAADAATLKPPMAEEEEEEEEEETWFDLPDLVVGGSDGLLLARYDSPWQFGG 180

Query: 181 DQQHSWHWDSYSHTILP 195
           DQQ SWHWDSYSHTILP
Sbjct: 181 DQQTSWHWDSYSHTILP 197

[Close]

BLAST of CmoCh08G001530 vs. NCBI nr
Match: KAG6592942.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.2 bits (692), Expect = 7.1e-69
Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRG-TTMSNIESESESSHSTRKYRGVRRRA 60
           MNTNSHHSQPTTTSSASSSASSSGENGRKRPRG TT SNIESESESSHSTRKYRGVRRRA
Sbjct: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTTTSNIESESESSHSTRKYRGVRRRA 60

Query: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120
           WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS
Sbjct: 61  WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPAS 120

Query: 121 LSAKDIQAAAADAATLKPPMAEEEEEEEE 149
           LSAKDIQAAAADAATLKPPMAEEEEEEEE
Sbjct: 121 LSAKDIQAAAADAATLKPPMAEEEEEEEE 149

[Close]

BLAST of CmoCh08G001530 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31
Identity = 95/226 (42.04%), Postives = 115/226 (50.88%), Query Frame = 0


Query: 11  TTTSSASSSASSSGENGRKRPRGTTMSN-------IESESESSHSTRKYRGVRRRAWGKW 70
           T T S+SS  +SS ++     R     N         + S+ + +   YRGVR R+WGKW
Sbjct: 23  TATISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKW 82

Query: 71  VSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASLSAK 130
           VSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG   FLNFPEL   LPRP S S K
Sbjct: 83  VSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPK 142

Query: 131 DIQAA---AADAATLKPPMAE------------------------------------EEE 187
           DIQAA   AA+A T   P+ +                                    ++E
Sbjct: 143 DIQAAATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKE 202

[Close]

BLAST of CmoCh08G001530 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 66/84 (78.57%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           YRGVR R WGKWVSEIREPRKKSRIWLGT+ST EMAARAHDAAAL IKG  A LNFPEL 
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 112 HQLPRPASLSAKDIQAAAADAATL 136
             LPRPAS S +D+QAAAA AA +
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAAM 126

[Close]

BLAST of CmoCh08G001530 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 66/82 (80.49%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           +RGVR R WGKWVSEIREP+KKSRIWLGT+STAEMAARAHD AALAIKG  A LNFPEL 
Sbjct: 45  FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELA 104

Query: 112 HQLPRPASLSAKDIQAAAADAA 134
           + LPRPAS   KDIQAAAA AA
Sbjct: 105 YHLPRPASADPKDIQAAAAAAA 126

[Close]

BLAST of CmoCh08G001530 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30
Identity = 67/101 (66.34%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 35  TMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAA 94
           T  + + + E +     YRG R R+WGKWVSEIREPRKKSRIWLGT+ TAEMAARAHD A
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 95  ALAIKGCGAFLNFPELKHQLPRPASLSAKDIQAAAADAATL 136
           AL+IKG  A LNFPEL   LPRP SLS +DIQAAAA+AA +
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]

BLAST of CmoCh08G001530 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 6.9e-30
Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 8   SQPTTTSSASSSASSS---GENGRKRPRGTTMSNIESESESSHST------RK------- 67
           S PTT+SS+SSS +S+    +N +++    ++S++ S  +           RK       
Sbjct: 38  SSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKH 97

Query: 68  --YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPE 127
             YRGVR R+WGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  A+LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 128 LKHQLPRPASLSAKDIQAAAADAA 134
           L  +LPRP + S KDIQAAA+ AA
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAA 181

The following BLAST results are available for this feature:

BLAST of CmoCh08G001530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M210	1.8e-30	42.04	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	1.5e-29	78.57	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZQP3	2.0e-29	80.49	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	3.3e-29	66.34	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LBQ7	9.7e-29	55.56	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh08G001530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5C9	6.2e-103	100.00	ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KUE1	8.7e-97	95.38	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KAN0	2.7e-50	60.91	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=...	[more]
A0A5A7TVV7	2.3e-49	61.68	Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var...	[more]
A0A1S3CBH6	2.3e-49	61.68	ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of CmoCh08G001530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959732.1	1.3e-102	100.00	ethylene-responsive transcription factor ERF039-like [Cucurbita moschata]	[more]
KAG7025350.1	2.1e-97	96.46	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023004375.1	1.8e-96	95.38	ethylene-responsive transcription factor ERF039-like [Cucurbita maxima]	[more]
XP_023515152.1	5.2e-96	96.45	ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo...	[more]
KAG6592942.1	7.1e-69	98.66	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of CmoCh08G001530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60490.1	1.3e-31	42.04	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	1.1e-30	78.57	Integrase-type DNA-binding superfamily protein	[more]
AT2G35700.1	1.4e-30	80.49	ERF family protein 38	[more]
AT2G25820.1	2.4e-30	66.34	Integrase-type DNA-binding superfamily protein	[more]
AT2G44940.1	6.9e-30	55.56	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 52..63 score: 70.91 coord: 74..90 score: 65.78
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 51..114 e-value: 6.2E-35 score: 132.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 51..100 e-value: 3.2E-14 score: 52.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 51..108 score: 23.327345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 51..110 e-value: 1.12655E-19 score: 76.5415
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 50..109 e-value: 3.0E-25 score: 90.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR31985:SF130	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043	coord: 8..148
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 8..148
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 51..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001530.1	CmoCh08G001530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity