CmoCh08G001270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G001270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein WHAT'S THIS FACTOR 1 homolog
Location	Cmo_Chr08: 663857 .. 665398 (+)
RNA-Seq Expression	CmoCh08G001270
Synteny	CmoCh08G001270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCATGGTACTTTTTTATTCGCCCAAAGCTTCGTTATCCATGTCCATACCTTTCGTTCTTCCGCATAGAGGTTATTTCTTTGAGAATCCTTCTTTGTCTGTTAAATCGGAATTTTGGGGGAAGAACTTGGATTTGCGGCACAGAAATGATGGTTTTTCCGGTAGTGATTTAAGAAAATCTCGTGTTCCTTTTCAACCGATTAGAGCTATTGTGAAACGGAGGAAAGAGCTTCCGTTCGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTAGTTATGAGGATTAGGAAGATTCTAGTTCAACATCCTGATAGAGTTATGTCGCTTAAGGAACTAGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAAAAGAGGAGGCTAATTGCTTTGTTGAAGAAGTTCCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAAAGTCAAGTTAACGGCGGAGGCCGAAAGGTTATATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGCTTGTTGGTTATGAAGCTGAGGAAGCTACTGATGATGTCGGTTGATAAACGAATATTGTTGGAGAAGATTGCTCATTTGAGGACTGATTTCGGTCTTCCTTTAGAGTTTCGTGAAACGATTTGTCACGGTTATCCTCAGTACTTTAGAGTTGTAGCAACGGGGCGTGGTCCAGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCAGTTTCTGCATCAGAGTTGGCAGAAGAGGAAAACCGAGCTATAGAGTTGGAAGAGAAGAATTTGATTATTGACCGACCGCTGAAGTTTAATCGTGTGAGGCTACCCAAGGGGCTTAACGTCTCAAAGAGTGAAATGAGGAGAATTTGTCAGTTTAGGGACATTCCTTACATCTCTCCCTATTCTGATTTCTCGGGGCTTAAGGCAGGTACGCCCGAGAAAGAGAAACACGCTTGCGGGGTTGTTCATGAGATTTTAAGCCTCACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTTCGAGAAGAGTTTAGATTCTCGCAGCAGTTGAGGGGGATGTTAATAAGGCATCCCGATATGTTTTACGTCTCACTGAAGGGGGATAGAGATTCGGTCTTCCTCAGAGAAGCATATCGTAATTCTCAGTTGATCGACAAAGATCGGTTACTAATCATAAAGGAGAAACTCCGAGCTCTTGTTGCTGTTCCTCGAATCCGAGGCAGAGGAGCACTCAAAAACGACACAGATGGGGGAGACGATCAGCCAGATTATATGAGTGGTGATGAGTCATCTGATATCGATAACCTTTTGGACGATGATGATGAATTTGACGACAATGAGGATGGAGCTTTTGAGGATAATTGGAGTGATGAAGAAGATGATACCCCACCGAGTTTCAATGGAGATCGAGATGGCGAATCCATAAATATTGAAGCAAGGAAGCAAAGGCAGGTCGATAACTCGCAAAAGCTCGATCAGAGTCTTCTTTCTCCCGTATTACCCGATGGACGGCCCCGAGAAAGATGGTGA

mRNA sequence

ATGGATTCCATGGTACTTTTTTATTCGCCCAAAGCTTCGTTATCCATGTCCATACCTTTCGTTCTTCCGCATAGAGGTTATTTCTTTGAGAATCCTTCTTTGTCTGTTAAATCGGAATTTTGGGGGAAGAACTTGGATTTGCGGCACAGAAATGATGGTTTTTCCGGTAGTGATTTAAGAAAATCTCGTGTTCCTTTTCAACCGATTAGAGCTATTGTGAAACGGAGGAAAGAGCTTCCGTTCGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTAGTTATGAGGATTAGGAAGATTCTAGTTCAACATCCTGATAGAGTTATGTCGCTTAAGGAACTAGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAAAAGAGGAGGCTAATTGCTTTGTTGAAGAAGTTCCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAAAGTCAAGTTAACGGCGGAGGCCGAAAGGTTATATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGCTTGTTGGTTATGAAGCTGAGGAAGCTACTGATGATGTCGGTTGATAAACGAATATTGTTGGAGAAGATTGCTCATTTGAGGACTGATTTCGGTCTTCCTTTAGAGTTTCGTGAAACGATTTGTCACGGTTATCCTCAGTACTTTAGAGTTGTAGCAACGGGGCGTGGTCCAGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCAGTTTCTGCATCAGAGTTGGCAGAAGAGGAAAACCGAGCTATAGAGTTGGAAGAGAAGAATTTGATTATTGACCGACCGCTGAAGTTTAATCGTGTGAGGCTACCCAAGGGGCTTAACGTCTCAAAGAGTGAAATGAGGAGAATTTGTCAGTTTAGGGACATTCCTTACATCTCTCCCTATTCTGATTTCTCGGGGCTTAAGGCAGGTACGCCCGAGAAAGAGAAACACGCTTGCGGGGTTGTTCATGAGATTTTAAGCCTCACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTTCGAGAAGAGTTTAGATTCTCGCAGCAGTTGAGGGGGATGTTAATAAGGCATCCCGATATGTTTTACGTCTCACTGAAGGGGGATAGAGATTCGGTCTTCCTCAGAGAAGCATATCGTAATTCTCAGTTGATCGACAAAGATCGGTTACTAATCATAAAGGAGAAACTCCGAGCTCTTGTTGCTGTTCCTCGAATCCGAGGCAGAGGAGCACTCAAAAACGACACAGATGGGGGAGACGATCAGCCAGATTATATGAGTGGTGATGAGTCATCTGATATCGATAACCTTTTGGACGATGATGATGAATTTGACGACAATGAGGATGGAGCTTTTGAGGATAATTGGAGTGATGAAGAAGATGATACCCCACCGAGTTTCAATGGAGATCGAGATGGCGAATCCATAAATATTGAAGCAAGGAAGCAAAGGCAGGTCGATAACTCGCAAAAGCTCGATCAGAGTCTTCTTTCTCCCGTATTACCCGATGGACGGCCCCGAGAAAGATGGTGA

Coding sequence (CDS)

ATGGATTCCATGGTACTTTTTTATTCGCCCAAAGCTTCGTTATCCATGTCCATACCTTTCGTTCTTCCGCATAGAGGTTATTTCTTTGAGAATCCTTCTTTGTCTGTTAAATCGGAATTTTGGGGGAAGAACTTGGATTTGCGGCACAGAAATGATGGTTTTTCCGGTAGTGATTTAAGAAAATCTCGTGTTCCTTTTCAACCGATTAGAGCTATTGTGAAACGGAGGAAAGAGCTTCCGTTCGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTAGTTATGAGGATTAGGAAGATTCTAGTTCAACATCCTGATAGAGTTATGTCGCTTAAGGAACTAGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAAAAGAGGAGGCTAATTGCTTTGTTGAAGAAGTTCCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAAAGTCAAGTTAACGGCGGAGGCCGAAAGGTTATATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGCTTGTTGGTTATGAAGCTGAGGAAGCTACTGATGATGTCGGTTGATAAACGAATATTGTTGGAGAAGATTGCTCATTTGAGGACTGATTTCGGTCTTCCTTTAGAGTTTCGTGAAACGATTTGTCACGGTTATCCTCAGTACTTTAGAGTTGTAGCAACGGGGCGTGGTCCAGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCAGTTTCTGCATCAGAGTTGGCAGAAGAGGAAAACCGAGCTATAGAGTTGGAAGAGAAGAATTTGATTATTGACCGACCGCTGAAGTTTAATCGTGTGAGGCTACCCAAGGGGCTTAACGTCTCAAAGAGTGAAATGAGGAGAATTTGTCAGTTTAGGGACATTCCTTACATCTCTCCCTATTCTGATTTCTCGGGGCTTAAGGCAGGTACGCCCGAGAAAGAGAAACACGCTTGCGGGGTTGTTCATGAGATTTTAAGCCTCACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTTCGAGAAGAGTTTAGATTCTCGCAGCAGTTGAGGGGGATGTTAATAAGGCATCCCGATATGTTTTACGTCTCACTGAAGGGGGATAGAGATTCGGTCTTCCTCAGAGAAGCATATCGTAATTCTCAGTTGATCGACAAAGATCGGTTACTAATCATAAAGGAGAAACTCCGAGCTCTTGTTGCTGTTCCTCGAATCCGAGGCAGAGGAGCACTCAAAAACGACACAGATGGGGGAGACGATCAGCCAGATTATATGAGTGGTGATGAGTCATCTGATATCGATAACCTTTTGGACGATGATGATGAATTTGACGACAATGAGGATGGAGCTTTTGAGGATAATTGGAGTGATGAAGAAGATGATACCCCACCGAGTTTCAATGGAGATCGAGATGGCGAATCCATAAATATTGAAGCAAGGAAGCAAAGGCAGGTCGATAACTCGCAAAAGCTCGATCAGAGTCTTCTTTCTCCCGTATTACCCGATGGACGGCCCCGAGAAAGATGGTGA

Protein sequence

MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW

Homology

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BLAST of CmoCh08G001270 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 6.3e-168
Identity = 324/533 (60.79%), Postives = 409/533 (76.74%), Query Frame = 0


Query: 10  PKASLSMSIPFVLPHRGYFFENPSLSVK------------SEFWGKNLDLRHRNDGFSGS 69
           PK  LS   P  +     F E   LSVK            S+F G+ L L ++   +S S
Sbjct: 3   PKLLLSAHKPLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTS 62

Query: 70  DLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKF 129
             RK+RV  +P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV  PDR+MSL+ LGK+
Sbjct: 63  --RKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKY 122

Query: 130 RRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLV 189
           RRDLGL+K+RR IALL+K+P VFE+VEEGA+SL+ K+T+EAERLYL+E++IRNE+E +LV
Sbjct: 123 RRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLV 182

Query: 190 MKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTH 249
           +KLRKL+MMS+DKRILLEKI+HL+TD GLPLEFR+TIC  YPQYFRVV T RGPALELTH
Sbjct: 183 VKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTH 242

Query: 250 WDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDI 309
           WDPELAVSA+EL+E++NR  E EE+NLIIDRP KFNRV+LP+GLN+SKSE R+I QFRD+
Sbjct: 243 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 302

Query: 310 PYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGM 369
            YISPY DFS L++GT EKEKHACGV+HE+LSLT EKRTLVDHLTHFREEFRFSQQLRGM
Sbjct: 303 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 362

Query: 370 LIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKN 429
           LIRHPD+FYVSLKG+RDSVFLREAYRNS+LIDKD L ++KEK+RALV+VPR   RG  + 
Sbjct: 363 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 422

Query: 430 DTDG-----------GDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDE--ED 489
           D +G           G+++ +    +E SD+D  L+ +D  +D +DG    +W+D+  E+
Sbjct: 423 DEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGND-DDG----DWTDDEGEE 482

Query: 490 DTPPSFNGDRDGE---SINIE-ARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           D PP+F+ D + E   S+ I  +   R+  + +K ++ +L+PV PDG PRE+W
Sbjct: 483 DVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

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BLAST of CmoCh08G001270 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 5.5e-156
Identity = 302/459 (65.80%), Postives = 358/459 (78.00%), Query Frame = 0


Query: 70  RAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRL 129
           +A VKRRKE+PFDNVIQRDKKLKLV+++R ILV +PDRVMSL++LG+FRRDLGL +KRRL
Sbjct: 58  QAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRL 117

Query: 130 IALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVD 189
           IALLK+FP VFEVVEEG +SL+ +LT  AERLYL+EL ++NE EGL V KLRKLLMMS D
Sbjct: 118 IALLKRFPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQD 177

Query: 190 KRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASEL 249
           KRIL+EKIAHL+ D GLP EFR+TIC  YPQYFRVV   RGP LELTHWDPELAVSA+E+
Sbjct: 178 KRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSAAEV 237

Query: 250 AEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGL 309
           AEEENRA E +E+NLIIDRPLKFNRV+LP+GL +S+ E RR+ QF+++PYISPYSDFS L
Sbjct: 238 AEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHL 297

Query: 310 KAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSL 369
           ++G+ EKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQ LRGMLIRHPDMFYVSL
Sbjct: 298 RSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSL 357

Query: 370 KGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRG--ALKNDTDGGDDQPD 429
           KGDRDSVFLREAY+NSQL++K +L+++KEK+RALVAVPR   RG  A   + D  +    
Sbjct: 358 KGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRTNGAAQ 417

Query: 430 YMSGDESSDIDNLLDDDDEFDDNEDGAFE-------------DNWSDEEDDTPPSFNGDR 489
            +S  E SD+++  D+D+   D ED   E             D W  E DD+PP F  D 
Sbjct: 418 MLS--EGSDVED--DEDEGLSDMEDLISEISGGKSDTDYHWGDGWVGENDDSPPDFEDD- 477

Query: 490 DGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           DG S+       ++  NS      +  PV PDGRPRERW
Sbjct: 478 DGSSLKEVKVTMKKTANSANGKAHV--PVFPDGRPRERW 509

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BLAST of CmoCh08G001270 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 1.1e-151
Identity = 293/457 (64.11%), Postives = 351/457 (76.81%), Query Frame = 0


Query: 70  RAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRL 129
           +A VKRRKE PFD VIQRDKKLKLV+++R ILV  PDRVMSL+ELG+FRRDLGL +KRRL
Sbjct: 52  QAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRL 111

Query: 130 IALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVD 189
           IALL++FP VF+VVEEG +SL+ +LT  AERLYL+EL++RNE EGL V KLRKLLMMS +
Sbjct: 112 IALLRRFPGVFDVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQE 171

Query: 190 KRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASEL 249
           KRIL+EK+AHL+ D GLP EFR+T+C  YPQYFRVV   RGPALELTHWDPELAVSA+EL
Sbjct: 172 KRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAEL 231

Query: 250 AEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGL 309
           AEEE+RA E EE+NLIIDRPLKFNRVRLPKGL +++ E RRI +F+++PYISPY+DFS L
Sbjct: 232 AEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHL 291

Query: 310 KAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSL 369
           ++G+ EKEKHACGVVHEILSLT+EKRTLVDHLTHFREEFRFSQ LRGM+IRHPDMFYVS 
Sbjct: 292 RSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSF 351

Query: 370 KGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGDDQPDYM 429
           KGDRDSVFLREAY++SQL++K++L+++KEK+RALVAVPR   R A+    +         
Sbjct: 352 KGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGSLQ 411

Query: 430 SGDESSDIDNLLDDDDEFDDNEDGAFE-------------DNWSDEEDDTPPSFNGDRDG 489
           S D+ SD +   D+D+   D ED   E             D W  E DD+PP F  D   
Sbjct: 412 SRDQVSD-EEYDDEDEGLSDMEDLISELSGGKSDADYEWGDGWFGENDDSPPDFGDDEVK 471

Query: 490 ESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
            ++ I        D S   + S   PV PDGRPRERW
Sbjct: 472 VAMKI-------ADGS--ANGSAPVPVFPDGRPRERW 498

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BLAST of CmoCh08G001270 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-36
Identity = 116/384 (30.21%), Postives = 197/384 (51.30%), Query Frame = 0


Query: 65  PFQPIRAIVKRR---KELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDL 124
           PF     I K++   ++  +DN ++ +KK++ V++   +++  P+  +++  L    R L
Sbjct: 33  PFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRL 92

Query: 125 GLE-KKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLL---- 184
           GL  K+    A L KFP VFE+ E     +   L     R  L++  IR+E E +L    
Sbjct: 93  GLGFKQHEPGAFLLKFPHVFEIYEHPVQRI---LYCRLTRKALDQ--IRHEHEAVLDQIP 152

Query: 185 --VMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVV--ATGRGPA 244
             V +LRKL+MMS   RI LE +   RT+FGLP +F  ++   +PQ+FR++     R   
Sbjct: 153 DAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKY 212

Query: 245 LELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRIC 304
           +E+   DP L++ A E   E    IE   K +  +       V  P G  + K     + 
Sbjct: 213 IEIVEKDPNLSICAIERVRE----IEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVW 272

Query: 305 QFRDIPYISPYSDFSGLKAGTPEK----EKHACGVVHEILSLTLEKRTLVDHLTHFREEF 364
           +++ +PY SPY D SG    + E     EK +   +HE+LSLT+EK+  ++ + HFR   
Sbjct: 273 KWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVM 332

Query: 365 RFSQQLRGMLIRHPDMFYVSLKGD---RDSVFLREAYRNSQLIDKDRLLIIKEKLRALVA 424
              ++L+  L++H  +FY+S +G+     +VFLRE Y+  +L++ + + + + +L  LV 
Sbjct: 333 NLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVL 392

Query: 425 VPRIRGR--GALKNDTDGGDDQPD 428
           +   + +    L    DG DD+ D
Sbjct: 393 MSPRKAKVDAELVRYRDGLDDEDD 407

[Close]

BLAST of CmoCh08G001270 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 9.5e-23
Identity = 91/334 (27.25%), Postives = 160/334 (47.90%), Query Frame = 0


Query: 73  VKRRKELPFDNV--IQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLI 132
           +K +++  FDN+  I R  +LK V+ ++  +VQ P+R + +  + K  R   +  K  + 
Sbjct: 29  MKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTK--IA 88

Query: 133 ALLKKFPAVFEVVEEGAFSLK-VKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVD 192
             L+KFP++FE      ++L   +LT EA  L  +E  +       L  +L+KL++MS D
Sbjct: 89  HFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKD 148

Query: 193 KRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG---RGPALELTHWDPELAVSA 252
             + L  +  ++   GLP ++ +         FR V      +G A++    D  L+V  
Sbjct: 149 NVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQ 208

Query: 253 SELAEEENRAIELEEKNLIIDRPLKFNRVRLP-KGLNVSKSEMRRICQFRDIPYISPYSD 312
               ++    + LEE    I+ PL       P KG  +       + +F+ +PY+SPY D
Sbjct: 209 KNAMKKRRGEVSLEE----IEFPL------FPSKGCRLRVKIEDWLMEFQKLPYVSPYDD 268

Query: 313 FSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMF 372
           +S L   +   EK   G +HE+L L +E       L   ++ F   Q++     RHP +F
Sbjct: 269 YSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIF 328

Query: 373 YVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEK 400
           Y+S+K    +  LRE YR+   ++   +L +++K
Sbjct: 329 YLSMKNKTCTAILREPYRDKASVETHPVLGVRKK 350

[Close]

BLAST of CmoCh08G001270 vs. ExPASy TrEMBL
Match: A0A6J1H780 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461117 PE=4 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 1.6e-286
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480
           GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN
Sbjct: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480

Query: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW
Sbjct: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of CmoCh08G001270 vs. ExPASy TrEMBL
Match: A0A6J1KW65 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122 PE=4 SV=1)

HSP 1 Score: 975.3 bits (2520), Expect = 9.7e-281
Identity = 505/513 (98.44%), Postives = 506/513 (98.64%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDSMVLFYSPKASLSMSIPFVLPHR YFFENPS SVKSEFWGKNLDLRHRNDGFSGSDLR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRAYFFENPSSSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           KSRVPFQPI AIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPITAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAE LYLEELKIRNEMEGLLVMKL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAESLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480
           GGDDQPDYMSG+ESSDIDNLLDD DEFDDNEDGAFEDNWSDEEDDTPPSFN DRDGESIN
Sbjct: 421 GGDDQPDYMSGEESSDIDNLLDDGDEFDDNEDGAFEDNWSDEEDDTPPSFNVDRDGESIN 480

Query: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           IEARKQ QVDNSQKLDQSLLSPVLPDGRPRERW
Sbjct: 481 IEARKQSQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of CmoCh08G001270 vs. ExPASy TrEMBL
Match: A0A1S3CG79 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.6e-236
Identity = 440/520 (84.62%), Postives = 473/520 (90.96%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDS +L YSPKASLS+S+PF+L H+ Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           K+  PFQPIRA+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GGD-DQPDYMSGDESSDIDNLLD------DDDEFDDNEDGAFEDNWSDEEDDTPPSFNGD 480
           GGD +QP  MSG+E SD+DNLLD      DDDEFDD+ + AFED+WSD EDDTPPSFNGD
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSFNGD 480

Query: 481 RDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           +DGESINI +RKQ+QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 QDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of CmoCh08G001270 vs. ExPASy TrEMBL
Match: A0A5D3BY23 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00850 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.2e-235
Identity = 440/523 (84.13%), Postives = 473/523 (90.44%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDS +L YSPKASLS+S+PF+L H+ Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           K+  PFQPIRA+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GGD-DQPDYMSGDESSDIDNLLD---------DDDEFDDNEDGAFEDNWSDEEDDTPPSF 480
           GGD +QP  MSG+E SD+DNLLD         DDDEFDD+ + AFED+WSD EDDTPPSF
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSF 480

Query: 481 NGDRDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           NGD+DGESINI +RKQ+QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 NGDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511

[Close]

BLAST of CmoCh08G001270 vs. ExPASy TrEMBL
Match: A0A6J1DTV5 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111023444 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 2.1e-235
Identity = 432/515 (83.88%), Postives = 472/515 (91.65%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKS-EFWGKNLDLRHRNDGFSGSDL 60
           MDS +L YSPKASLS+S+PF+LP + YF ENPS S+KS EFWG+NLDLRHR D  S S+L
Sbjct: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDS-SSSNL 60

Query: 61  RKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRR 120
           RK  VP QPIRA+VKRRKEL FDNVIQRDKKLKLVMRIRKILVQ PDR+MSLKELGKFRR
Sbjct: 61  RKFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRR 120

Query: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMK 180
           DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLT EAERLYLEELKIRNEMEGLLV+K
Sbjct: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVK 180

Query: 181 LRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWD 240
           LRKLLMMS+DKRILLEKIAHLRTDFGLPLEFR+TICH YP YFRVVATGRGPALELTHWD
Sbjct: 181 LRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWD 240

Query: 241 PELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPY 300
           PELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SK EMR+I QFRDIPY
Sbjct: 241 PELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPY 300

Query: 301 ISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360
           +SPYSDFS LKAGTP+KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI
Sbjct: 301 VSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360

Query: 361 RHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDT 420
           RHPDMFY+SLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR RGRGA K+DT
Sbjct: 361 RHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDT 420

Query: 421 DGGD-DQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGES 480
           DG + +QPD +SG++ SD+DNLL DDD+ +D+ D  ++D WSD EDDTPPSF+GD DGE+
Sbjct: 421 DGEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSD-EDDTPPSFDGDGDGEA 480

Query: 481 INIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           INI + KQ++VDN QK+ QSLL+PVLPDGR RERW
Sbjct: 481 INIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: XP_022960372.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 994.6 bits (2570), Expect = 3.2e-286
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480
           GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN
Sbjct: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480

Query: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW
Sbjct: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: XP_023514273.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 985.3 bits (2546), Expect = 1.9e-283
Identity = 508/513 (99.03%), Postives = 510/513 (99.42%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPS SVKS+FWGKNLDLRHRNDGF GSDLR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSSSVKSQFWGKNLDLRHRNDGFFGSDLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYRNS LIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSHLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480
           GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN
Sbjct: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480

Query: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW
Sbjct: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: XP_023005000.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 975.3 bits (2520), Expect = 2.0e-280
Identity = 505/513 (98.44%), Postives = 506/513 (98.64%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDSMVLFYSPKASLSMSIPFVLPHR YFFENPS SVKSEFWGKNLDLRHRNDGFSGSDLR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRAYFFENPSSSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           KSRVPFQPI AIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPITAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAE LYLEELKIRNEMEGLLVMKL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAESLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESIN 480
           GGDDQPDYMSG+ESSDIDNLLDD DEFDDNEDGAFEDNWSDEEDDTPPSFN DRDGESIN
Sbjct: 421 GGDDQPDYMSGEESSDIDNLLDDGDEFDDNEDGAFEDNWSDEEDDTPPSFNVDRDGESIN 480

Query: 481 IEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           IEARKQ QVDNSQKLDQSLLSPVLPDGRPRERW
Sbjct: 481 IEARKQSQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: KAG6592915.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025320.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 966.8 bits (2498), Expect = 7.2e-278
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 16  MSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLRKSRVPFQPIRAIVKR 75
           MSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLRKSRVPFQPIRAIVKR
Sbjct: 1   MSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLRKSRVPFQPIRAIVKR 60

Query: 76  RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 135
           RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK
Sbjct: 61  RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 120

Query: 136 FPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDKRILLE 195
           FPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDKRILLE
Sbjct: 121 FPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDKRILLE 180

Query: 196 KIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELAEEENR 255
           KIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELAEEENR
Sbjct: 181 KIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELAEEENR 240

Query: 256 AIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGLKAGTPE 315
           AIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGLKAGTPE
Sbjct: 241 AIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSGLKAGTPE 300

Query: 316 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 375
           KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS
Sbjct: 301 KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDS 360

Query: 376 VFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGDDQPDYMSGDESS 435
           VFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGDDQPDYMSGDESS
Sbjct: 361 VFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTDGGDDQPDYMSGDESS 420

Query: 436 DIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESINIEARKQRQVDNSQKL 495
           DIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESINIEARKQRQVDNSQKL
Sbjct: 421 DIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGESINIEARKQRQVDNSQKL 480

Query: 496 DQSLLSPVLPDGRPRERW 514
           DQSLLSPVLPDGRPRERW
Sbjct: 481 DQSLLSPVLPDGRPRERW 498

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: XP_008461525.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 826.6 bits (2134), Expect = 1.2e-235
Identity = 440/520 (84.62%), Postives = 473/520 (90.96%), Query Frame = 0


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDS +L YSPKASLS+S+PF+L H+ Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           K+  PFQPIRA+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GGD-DQPDYMSGDESSDIDNLLD------DDDEFDDNEDGAFEDNWSDEEDDTPPSFNGD 480
           GGD +QP  MSG+E SD+DNLLD      DDDEFDD+ + AFED+WSD EDDTPPSFNGD
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSFNGD 480

Query: 481 RDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           +DGESINI +RKQ+QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 QDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of CmoCh08G001270 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 592.0 bits (1525), Expect = 4.5e-169
Identity = 324/533 (60.79%), Postives = 409/533 (76.74%), Query Frame = 0


Query: 10  PKASLSMSIPFVLPHRGYFFENPSLSVK------------SEFWGKNLDLRHRNDGFSGS 69
           PK  LS   P  +     F E   LSVK            S+F G+ L L ++   +S S
Sbjct: 3   PKLLLSAHKPLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTS 62

Query: 70  DLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKF 129
             RK+RV  +P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV  PDR+MSL+ LGK+
Sbjct: 63  --RKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKY 122

Query: 130 RRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLV 189
           RRDLGL+K+RR IALL+K+P VFE+VEEGA+SL+ K+T+EAERLYL+E++IRNE+E +LV
Sbjct: 123 RRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLV 182

Query: 190 MKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTH 249
           +KLRKL+MMS+DKRILLEKI+HL+TD GLPLEFR+TIC  YPQYFRVV T RGPALELTH
Sbjct: 183 VKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTH 242

Query: 250 WDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDI 309
           WDPELAVSA+EL+E++NR  E EE+NLIIDRP KFNRV+LP+GLN+SKSE R+I QFRD+
Sbjct: 243 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 302

Query: 310 PYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGM 369
            YISPY DFS L++GT EKEKHACGV+HE+LSLT EKRTLVDHLTHFREEFRFSQQLRGM
Sbjct: 303 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 362

Query: 370 LIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKN 429
           LIRHPD+FYVSLKG+RDSVFLREAYRNS+LIDKD L ++KEK+RALV+VPR   RG  + 
Sbjct: 363 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 422

Query: 430 DTDG-----------GDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDE--ED 489
           D +G           G+++ +    +E SD+D  L+ +D  +D +DG    +W+D+  E+
Sbjct: 423 DEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGND-DDG----DWTDDEGEE 482

Query: 490 DTPPSFNGDRDGE---SINIE-ARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           D PP+F+ D + E   S+ I  +   R+  + +K ++ +L+PV PDG PRE+W
Sbjct: 483 DVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of CmoCh08G001270 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 240.0 bits (611), Expect = 4.3e-63
Identity = 160/424 (37.74%), Postives = 245/424 (57.78%), Query Frame = 0


Query: 82  DNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 141
           D  + +  +++ V ++  +L+  P   + ++ L K R  L +E    ++++++++P +FE
Sbjct: 66  DRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFE 125

Query: 142 V-----------VEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDK 201
           +             +    L V+LT+ A  L ++EL +++E+   L  KL+KLLM+S  +
Sbjct: 126 LFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHR 185

Query: 202 RILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELA 261
           R+LL K+ H+  DFG P  FR  +C+ YP  F+ V T  G ALEL   DPEL   A+++ 
Sbjct: 186 RLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPEL---ANQMP 245

Query: 262 EEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSG-L 321
             E       ++ LI+DRPLKF R+ L +GLN+ +     + +FR+ P + PY   S  L
Sbjct: 246 SPE------VDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYL 305

Query: 322 KAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSL 381
            + + E EK AC VV E+L LT+EKRTL+DHLTHFR+EF    +LR +++RHP++FYVS+
Sbjct: 306 ASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSI 365

Query: 382 KGDRDSVFLREAYR-NSQLIDKDRLLIIKEKLRALVAV-PRIRGRGALKNDTDGGDDQPD 441
           KG RDSVFL EAY  N  L+DKD  L+I+E+L  L+    RIR     K  T G     +
Sbjct: 366 KGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVEE 425

Query: 442 YMSGDES-SDIDNLLDD--DDEFD---DNEDGAFEDNWSDEEDDTPPSFNGDRDGESINI 486
               DE+  D D+ LDD  +D F+   D+ED   E ++ +E+DD     N    GES+  
Sbjct: 426 KRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDEAGVN----GESVEY 476

[Close]

BLAST of CmoCh08G001270 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-45
Identity = 138/407 (33.91%), Postives = 213/407 (52.33%), Query Frame = 0


Query: 70  RAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRL 129
           R+  KR +EL  +   ++ K    V+ + ++L    D +M+++   ++RR + L K  ++
Sbjct: 52  RSREKRVQEL--EIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKI 111

Query: 130 IALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVD 189
              ++K P +FE+ ++    L   LT   E L  E  K+  E        + + LMMSVD
Sbjct: 112 SDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVD 171

Query: 190 KRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPA-LELTHWDPELAVSASE 249
           K++ L+KI H R DFGLPL+FR    + +PQ+F+VV  G G   LEL  W+P  A++   
Sbjct: 172 KKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAIT--- 231

Query: 250 LAEEENRAIELEEK------NLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISP 309
             E E + + + E        L +  P+KF     P           +I  F+   Y+SP
Sbjct: 232 --ELEKKTLGITEDCEHKPGMLSLAFPMKF-----PPSYKKMYRYRGKIEHFQKRSYLSP 291

Query: 310 YSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 369
           Y+D  GL+AG+ E +K A  V+HE+LS TLEKR + DHLTHFR EF   Q+L  + ++H 
Sbjct: 292 YADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHC 351

Query: 370 DMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDT--- 429
            +FYVS +G R SVFL E Y   +LI+K  L++ KEKL         +      +DT   
Sbjct: 352 GIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRKRDIQTYSDTLDM 411

Query: 430 -------DGGDDQPDYMSGDESSDIDNLLDDDDEFDDNE-DGAFEDN 459
                   G  D+   +  ++  D D+++ DDDE D  E + A+E+N
Sbjct: 412 EERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDIGEVNDAYEEN 446

[Close]

BLAST of CmoCh08G001270 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-43
Identity = 123/336 (36.61%), Postives = 182/336 (54.17%), Query Frame = 0


Query: 76  RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 135
           +K+   D  I++DK+ KL  R+ K ++  P +V+ L+ L K R  L L  K +  + ++ 
Sbjct: 39  KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK--SFVEM 98

Query: 136 FPAVFEV----VEEGAFSLKVKLTAEAERLYL-EELKIRNEMEGLLVMKLRKLLMMSVDK 195
            P++FE+    ++  +  ++        R +L EE +I +E E LLV KL +LLMM+ DK
Sbjct: 99  NPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDK 158

Query: 196 RILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGR--GPALELTHWDPELAVSASE 255
            I  +K+ H++ DFG P +F   +   YP YFR+          LEL  W+P+ A S  E
Sbjct: 159 VISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIE 218

Query: 256 LAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSG 315
           L  E+        K  +  RP  +N V+LP G  + K        + +  YISPY D S 
Sbjct: 219 LRAEDETL-----KTGVRIRP-NYN-VKLPSGFFLRKEMREWTRDWLEQDYISPYEDVSH 278

Query: 316 LKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 375
           L   + E EK   GVVHE+LSL+L KR  V  L  F +EFRFS     +  RH  +FY+S
Sbjct: 279 LDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLS 338

Query: 376 LKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALV 405
           LKG   +  LREAY++ +L+D+D LL IK+K   L+
Sbjct: 339 LKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 365

[Close]

BLAST of CmoCh08G001270 vs. TAIR 10
Match: AT4G08940.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-43
Identity = 117/334 (35.03%), Postives = 180/334 (53.89%), Query Frame = 0


Query: 70  RAIVKRRKELP-FDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRR 129
           ++I     +LP  ++++ RD   + ++R ++ + + P+R++ L + GK  R+LG  + R+
Sbjct: 59  KSIQHESTKLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRK 118

Query: 130 LIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSV 189
           +   + K P +F+        + +  T   E L  EE  +   ME   V  +RKLLMM+ 
Sbjct: 119 VTKFIPKHPLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTK 178

Query: 190 DKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRG-PALELTHWDPELAVSAS 249
           DKRILL KI H R  FG+P +FR+ +   YP YFRVV  G G   LEL +WD  LAVS  
Sbjct: 179 DKRILLSKIHHTRLLFGIPEDFRDRVAK-YPDYFRVVTGGDGNRVLELVNWDTNLAVS-- 238

Query: 250 ELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFS 309
               E  R   ++E      R  KF  V+  K L + + + R++      P +SPYSD  
Sbjct: 239 ----ELERLFMIDEDK--AKRVFKF-PVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGW 298

Query: 310 GLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYV 369
            L   + E EK+  G+VHE L+LTLEKR  + H+  F++EF  ++Q   ML +    FY+
Sbjct: 299 KLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYL 358

Query: 370 SLKGDRDSVFLREAY-RNSQLIDKDRLLIIKEKL 401
           +      +VFL++AY  N  L+ KD  ++  EKL
Sbjct: 359 AGTEMNWTVFLKDAYDENGVLVSKDPQVVFNEKL 382

The following BLAST results are available for this feature:

BLAST of CmoCh08G001270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MFS5	6.3e-168	60.79	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	5.5e-156	65.80	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
B6TTV8	1.1e-151	64.11	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q689D6	1.2e-36	30.21	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	9.5e-23	27.25	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of CmoCh08G001270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H780	1.6e-286	100.00	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KW65	9.7e-281	98.44	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122...	[more]
A0A1S3CG79	5.6e-236	84.62	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4...	[more]
A0A5D3BY23	1.2e-235	84.13	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1DTV5	2.1e-235	83.88	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110234...	[more]

BLAST of CmoCh08G001270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960372.1	3.2e-286	100.00	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata]	[more]
XP_023514273.1	1.9e-283	99.03	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_023005000.1	2.0e-280	98.44	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima]	[more]
KAG6592915.1	7.2e-278	100.00	Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_008461525.1	1.2e-235	84.62	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]

BLAST of CmoCh08G001270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01037.1	4.5e-169	60.79	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G62990.1	4.3e-63	37.74	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	1.1e-45	33.91	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	1.3e-43	36.61	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G08940.1	2.9e-43	35.03	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 467..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..466
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 413..513
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 77..405 e-value: 1.5E-106 score: 356.0
IPR040293	Protein WHAT'S THIS FACTOR 1-like	PANTHER	PTHR31476:SF4	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 37..460
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 37..460

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001270.1	CmoCh08G001270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0003723	RNA binding