CmoCh08G001020 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G001020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor IBH1
Location	Cmo_Chr08: 539481 .. 539936 (+)
RNA-Seq Expression	CmoCh08G001020
Synteny	CmoCh08G001020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTGAATCCGGTACAACCCCGATGAATTCCTCCTCTTCTTCCCTCCGCCTAGCTCGAACCTTCCTCCGATCCTTCTCCAAGATCAAATCCCGAAGACCCACCACCACTGCCTCTCGGTCCGCTTTCGAGCTTAGACGCCGGAGTCGACGGATAAAAATCGCAGCCTACTCCTCCATGGCACGCGTGGCTGGGCCACAACGAGCATGGGCTAGAGCCCTCCTCTTCAAGCTCAATACTCGAGCTAGACATAGGACTTTGATGAGACGCCGCCGTTCAACGATGCCCTCGGCCTACTCTGACGACCATGTCGGGAAGCTCCGCCGCTTACTTCCGGGCGGCGACGGAATGGACGTGTGCACCTTGCTGGAGGAAACTGCCGACTACATCCATTGCCTCTCCGCGCAGGTTAAGGTCATGAATGCCATAGCTCATCATTTATCAACAAATTGA

mRNA sequence

ATGGCTTCTGAATCCGGTACAACCCCGATGAATTCCTCCTCTTCTTCCCTCCGCCTAGCTCGAACCTTCCTCCGATCCTTCTCCAAGATCAAATCCCGAAGACCCACCACCACTGCCTCTCGGTCCGCTTTCGAGCTTAGACGCCGGAGTCGACGGATAAAAATCGCAGCCTACTCCTCCATGGCACGCGTGGCTGGGCCACAACGAGCATGGGCTAGAGCCCTCCTCTTCAAGCTCAATACTCGAGCTAGACATAGGACTTTGATGAGACGCCGCCGTTCAACGATGCCCTCGGCCTACTCTGACGACCATGTCGGGAAGCTCCGCCGCTTACTTCCGGGCGGCGACGGAATGGACGTGTGCACCTTGCTGGAGGAAACTGCCGACTACATCCATTGCCTCTCCGCGCAGGTTAAGGTCATGAATGCCATAGCTCATCATTTATCAACAAATTGA

Coding sequence (CDS)

ATGGCTTCTGAATCCGGTACAACCCCGATGAATTCCTCCTCTTCTTCCCTCCGCCTAGCTCGAACCTTCCTCCGATCCTTCTCCAAGATCAAATCCCGAAGACCCACCACCACTGCCTCTCGGTCCGCTTTCGAGCTTAGACGCCGGAGTCGACGGATAAAAATCGCAGCCTACTCCTCCATGGCACGCGTGGCTGGGCCACAACGAGCATGGGCTAGAGCCCTCCTCTTCAAGCTCAATACTCGAGCTAGACATAGGACTTTGATGAGACGCCGCCGTTCAACGATGCCCTCGGCCTACTCTGACGACCATGTCGGGAAGCTCCGCCGCTTACTTCCGGGCGGCGACGGAATGGACGTGTGCACCTTGCTGGAGGAAACTGCCGACTACATCCATTGCCTCTCCGCGCAGGTTAAGGTCATGAATGCCATAGCTCATCATTTATCAACAAATTGA

Protein sequence

MASESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMARVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSTN

Homology

[Close]

BLAST of CmoCh08G001020 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14
Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 23  FLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMARVA-GPQRAWARALLFKLN- 82
           FL+S S ++ + P  T  +  +    R R+IK AAY SMAR A G  R W+RALL + + 
Sbjct: 22  FLQSLSNLRKQNPFDTPDQKNY----RVRKIKKAAYVSMARAAGGSSRLWSRALLRRADK 81

Query: 83  --------TRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDVCTLLEETADYIH 142
                   +R + +   +RRRS   +   ++   +LR L+PGG GM+   L+EETA YI 
Sbjct: 82  DDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIK 141

Query: 143 CLSAQVKVMNAIAHHLS 150
           CLS QVKVM  +   LS
Sbjct: 142 CLSMQVKVMQCLVDGLS 154

[Close]

BLAST of CmoCh08G001020 vs. ExPASy Swiss-Prot
Match: Q7XR02 (Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-13
Identity = 65/163 (39.88%), Postives = 81/163 (49.69%), Query Frame = 0


Query: 19  LARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMARVAGPQRAWARALLFK 78
           LA  FLR+ S+I    P T          RR+R I+ AAYSSMAR A P+RAW+RALL +
Sbjct: 44  LAFHFLRALSRIHRATPVT----------RRTRTIRRAAYSSMARAASPRRAWSRALLGQ 103

Query: 79  LNTRARHRTLMRR-----RRSTM----PSAYS---------------------------- 138
           +  R R RTLMRR     RR  +    PS  S                            
Sbjct: 104 VRAR-RSRTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPPRQQGE 163

Query: 139 DDHVGKLRRLLPGGDGMDVCTLLEETADYIHCLSAQVKVMNAI 145
                 LRRL+PGG GM+  +LLEETADY+  L AQV++M  +
Sbjct: 164 PPRAEALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGL 195

[Close]

BLAST of CmoCh08G001020 vs. ExPASy Swiss-Prot
Match: Q01I07 (Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-13
Identity = 65/163 (39.88%), Postives = 80/163 (49.08%), Query Frame = 0


Query: 19  LARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMARVAGPQRAWARALLFK 78
           LA  FLR+ S+I    P T          RR+R I+ AAYSSMAR A P+RAW+RALL +
Sbjct: 44  LAFHFLRALSRIHRATPVT----------RRTRTIRRAAYSSMARAASPRRAWSRALLGQ 103

Query: 79  LNTRARHRTLMRR-----RRSTM----PSAYS---------------------------- 138
              R R RTLMRR     RR  +    PS  S                            
Sbjct: 104 ARAR-RSRTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPPRQQGE 163

Query: 139 DDHVGKLRRLLPGGDGMDVCTLLEETADYIHCLSAQVKVMNAI 145
                 LRRL+PGG GM+  +LLEETADY+  L AQV++M  +
Sbjct: 164 PPRADALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGL 195

[Close]

BLAST of CmoCh08G001020 vs. ExPASy TrEMBL
Match: A0A6J1KS83 (transcription factor IBH1 OS=Cucurbita maxima OX=3661 GN=LOC111498183 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.6e-67
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MASESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSS 60
           MA ESG TPMNSSSSSLRLARTFLRSFS+IKSRRPTT ASRSAFELRRRSRRIKIAAYSS
Sbjct: 1   MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSS 60

Query: 61  MARVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDV 120
           MARVAGPQR WARALLFKLNTRARHRT MRRR STMPSAY DDHVGKLRRL+PGGDGMDV
Sbjct: 61  MARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDDHVGKLRRLVPGGDGMDV 120

Query: 121 CTLLEETADYIHCLSAQVKVMNAIAHHLSTN 152
           CTLLEETADYIHCLSAQVKVMNAIAHHLS N
Sbjct: 121 CTLLEETADYIHCLSAQVKVMNAIAHHLSKN 151

[Close]

BLAST of CmoCh08G001020 vs. ExPASy TrEMBL
Match: A0A5D3BPL2 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G00050 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.6e-43
Identity = 105/149 (70.47%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 3   SESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMA 62
           S+S  T +NS+SS  R ARTFLR FS+IKS+R  T AS    +L+R+S+RIK+ AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDVCT 122
           RVAGP+RAWARALLFKL TR RHRTLMRR+R   PS   DD VGKLRRLLPGG+ MDVCT
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMRRKR--RPSTSPDDQVGKLRRLLPGGETMDVCT 123

Query: 123 LLEETADYIHCLSAQVKVMNAIA-HHLST 151
           LLEETA+YIHCLS QVKVM AI+  HLST
Sbjct: 124 LLEETANYIHCLSTQVKVMKAISDQHLST 150

[Close]

BLAST of CmoCh08G001020 vs. ExPASy TrEMBL
Match: A0A1S3CLD3 (transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.6e-43
Identity = 105/149 (70.47%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 3   SESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMA 62
           S+S  T +NS+SS  R ARTFLR FS+IKS+R  T AS    +L+R+S+RIK+ AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDVCT 122
           RVAGP+RAWARALLFKL TR RHRTLMRR+R   PS   DD VGKLRRLLPGG+ MDVCT
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMRRKR--RPSTSPDDQVGKLRRLLPGGETMDVCT 123

Query: 123 LLEETADYIHCLSAQVKVMNAIA-HHLST 151
           LLEETA+YIHCLS QVKVM AI+  HLST
Sbjct: 124 LLEETANYIHCLSTQVKVMKAISDQHLST 150

[Close]

BLAST of CmoCh08G001020 vs. ExPASy TrEMBL
Match: A0A0A0KDQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.3e-35
Identity = 96/148 (64.86%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 3   SESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMA 62
           S+S  T +NS+SS L  ART              T AS    +L+R+SRRIK+AAYSSMA
Sbjct: 4   SKSAITLLNSTSSRLCFART------------SATFASAPPDQLKRQSRRIKMAAYSSMA 63

Query: 63  RVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDVCT 122
           RVAG +RAWARALLF+L+TR RH+TLMRR+R   PS  SDD VGKLRRLLPGG+ MDVCT
Sbjct: 64  RVAGRRRAWARALLFRLHTRPRHKTLMRRKR--RPSTSSDDMVGKLRRLLPGGETMDVCT 123

Query: 123 LLEETADYIHCLSAQVKVMNAIA-HHLS 150
           LLEETA+YIHCLS QVKVM AI+ HHLS
Sbjct: 124 LLEETANYIHCLSTQVKVMKAISNHHLS 137

[Close]

BLAST of CmoCh08G001020 vs. ExPASy TrEMBL
Match: A0A2N9I4P0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 9.6e-27
Identity = 78/149 (52.35%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 10  MNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMARVAGPQR 69
           +N++S  ++ AR F+R+ SK+K   P   +S S  E+R+RS+RIKIAAYSSMA   G ++
Sbjct: 8   LNTNSRRIKFARRFIRTLSKMKKTAP---SSSSIDEVRKRSQRIKIAAYSSMAHAVGSKK 67

Query: 70  AWARALLFKLNTRARHRTLMRRRRS---TMPSAYSDDHVG------KLRRLLPGGDGMDV 129
           AW+RA+LFKL  RARH+ +M RRRS       A  +D  G      KLR+L+PGG  MD+
Sbjct: 68  AWSRAILFKLRNRARHQGMMMRRRSIGFKKKRAIKNDPPGEQNQTKKLRQLVPGGKAMDM 127

Query: 130 CTLLEETADYIHCLSAQVKVMNAIAHHLS 150
           C+LLEETA YI CLS QVKVM  IA H S
Sbjct: 128 CSLLEETAHYIRCLSTQVKVMQTIADHFS 153

[Close]

BLAST of CmoCh08G001020 vs. NCBI nr
Match: KAG7025295.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.8 bits (704), Expect = 2.2e-70
Identity = 147/151 (97.35%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MASESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSS 60
           MASESGTTPMNSSSSSLRLARTFLRSFS+IKSRRPTT ASRSAFELRRRSRRIKIAAYSS
Sbjct: 1   MASESGTTPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSS 60

Query: 61  MARVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDV 120
           MARVAGPQRAWARALLFKLNTRARH TLMRRRRSTMPSAY DDHVGKLRRLLPGGDGMDV
Sbjct: 61  MARVAGPQRAWARALLFKLNTRARHGTLMRRRRSTMPSAYPDDHVGKLRRLLPGGDGMDV 120

Query: 121 CTLLEETADYIHCLSAQVKVMNAIAHHLSTN 152
           CTLLEETADYIHCLSAQVKVMNAIAHHLSTN
Sbjct: 121 CTLLEETADYIHCLSAQVKVMNAIAHHLSTN 151

[Close]

BLAST of CmoCh08G001020 vs. NCBI nr
Match: XP_023005092.1 (transcription factor IBH1 [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MASESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSS 60
           MA ESG TPMNSSSSSLRLARTFLRSFS+IKSRRPTT ASRSAFELRRRSRRIKIAAYSS
Sbjct: 1   MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSS 60

Query: 61  MARVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDV 120
           MARVAGPQR WARALLFKLNTRARHRT MRRR STMPSAY DDHVGKLRRL+PGGDGMDV
Sbjct: 61  MARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDDHVGKLRRLVPGGDGMDV 120

Query: 121 CTLLEETADYIHCLSAQVKVMNAIAHHLSTN 152
           CTLLEETADYIHCLSAQVKVMNAIAHHLS N
Sbjct: 121 CTLLEETADYIHCLSAQVKVMNAIAHHLSKN 151

[Close]

BLAST of CmoCh08G001020 vs. NCBI nr
Match: KAG6592893.1 (hypothetical protein SDJN03_12369, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.6 bits (475), Expect = 8.0e-44
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 10  MNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMARVAGPQR 69
           MNSSSSSLRLARTFLRSFS+IKSRRPTT ASRSAFELRRRSRRIKIAAYSSMAR AGPQR
Sbjct: 1   MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQR 60

Query: 70  AWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGG 116
           AWARALLFKLNTRARHRTLMRRRRSTMPSAY DDHVGKLRRLLPGG
Sbjct: 61  AWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLRRLLPGG 106

[Close]

BLAST of CmoCh08G001020 vs. NCBI nr
Match: XP_008464343.1 (PREDICTED: transcription factor IBH1 [Cucumis melo] >KAA0031737.1 transcription factor IBH1 [Cucumis melo var. makuwa] >TYK01643.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 183.0 bits (463), Expect = 2.0e-42
Identity = 105/149 (70.47%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 3   SESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMA 62
           S+S  T +NS+SS  R ARTFLR FS+IKS+R  T AS    +L+R+S+RIK+ AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDVCT 122
           RVAGP+RAWARALLFKL TR RHRTLMRR+R   PS   DD VGKLRRLLPGG+ MDVCT
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMRRKR--RPSTSPDDQVGKLRRLLPGGETMDVCT 123

Query: 123 LLEETADYIHCLSAQVKVMNAIA-HHLST 151
           LLEETA+YIHCLS QVKVM AI+  HLST
Sbjct: 124 LLEETANYIHCLSTQVKVMKAISDQHLST 150

[Close]

BLAST of CmoCh08G001020 vs. NCBI nr
Match: KAG6575326.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013866.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.6 bits (457), Expect = 9.8e-42
Identity = 107/152 (70.39%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 1   MASESGTTPMNSSSSSLRLARTFLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSS 60
           MAS+SG TP+ S+SS+LRLARTFLRSF+ IKS+ P    S    ELRRRSRRIK+ AYSS
Sbjct: 1   MASKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPSPP--ELRRRSRRIKMMAYSS 60

Query: 61  MARVAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDV 120
           MAR AGP+ AWARALLFKL TRARHRTL+ RRR       SDD VGKLRRL+PGG+ MDV
Sbjct: 61  MARTAGPRCAWARALLFKLRTRARHRTLITRRRH---HHRSDDRVGKLRRLVPGGESMDV 120

Query: 121 CTLLEETADYIHCLSAQVKVMNAIA-HHLSTN 152
           CTLLEET +YI CLSAQVKVM AI  H  STN
Sbjct: 121 CTLLEETGEYIQCLSAQVKVMKAICDHQFSTN 147

[Close]

BLAST of CmoCh08G001020 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 80.9 bits (198), Expect = 9.8e-16
Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 23  FLRSFSKIKSRRPTTTASRSAFELRRRSRRIKIAAYSSMARVA-GPQRAWARALLFKLN- 82
           FL+S S ++ + P  T  +  +    R R+IK AAY SMAR A G  R W+RALL + + 
Sbjct: 22  FLQSLSNLRKQNPFDTPDQKNY----RVRKIKKAAYVSMARAAGGSSRLWSRALLRRADK 81

Query: 83  --------TRARHRTLMRRRRSTMPSAYSDDHVGKLRRLLPGGDGMDVCTLLEETADYIH 142
                   +R + +   +RRRS   +   ++   +LR L+PGG GM+   L+EETA YI 
Sbjct: 82  DDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIK 141

Query: 143 CLSAQVKVMNAIAHHLS 150
           CLS QVKVM  +   LS
Sbjct: 142 CLSMQVKVMQCLVDGLS 154

The following BLAST results are available for this feature:

BLAST of CmoCh08G001020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKX1	1.4e-14	40.15	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]
Q7XR02	2.6e-13	39.88	Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 ...	[more]
Q01I07	3.4e-13	39.88	Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV...	[more]

BLAST of CmoCh08G001020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KS83	5.6e-67	93.38	transcription factor IBH1 OS=Cucurbita maxima OX=3661 GN=LOC111498183 PE=4 SV=1	[more]
A0A5D3BPL2	9.6e-43	70.47	Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CLD3	9.6e-43	70.47	transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1	[more]
A0A0A0KDQ3	3.3e-35	64.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1	[more]
A0A2N9I4P0	9.6e-27	52.35	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1	[more]

BLAST of CmoCh08G001020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025295.1	2.2e-70	97.35	Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023005092.1	1.1e-66	93.38	transcription factor IBH1 [Cucurbita maxima]	[more]
KAG6592893.1	8.0e-44	96.23	hypothetical protein SDJN03_12369, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008464343.1	2.0e-42	70.47	PREDICTED: transcription factor IBH1 [Cucumis melo] >KAA0031737.1 transcription ...	[more]
KAG6575326.1	9.8e-42	70.39	Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]

BLAST of CmoCh08G001020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43060.1	9.8e-16	40.15	ILI1 binding bHLH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124:SF76	TRANSCRIPTION FACTOR IBH1-LIKE	coord: 8..149
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 8..149
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 105..145 e-value: 9.15297E-14 score: 59.9436
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 80..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001020.1	CmoCh08G001020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding