CmoCh08G000280 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh08G000280
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S27
LocationCmo_Chr08: 150598 .. 154567 (+)
RNA-Seq ExpressionCmoCh08G000280
SyntenyCmoCh08G000280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATTTCCTGGTGCGACGGAAACGGAGACGAGCGCCAGATTTTGTGGCGGAGAGAGTCCGAAATGGCGTGTGGATGTTTATGTGCCTCCATTCTTTCTCCCTCCAACCTTCTTTCTCTTGATTATTCAGCTGATATTAAAACCAAGTTGCTGCTTCCTTCCCCAGTTGCTTTCCCTTCACCATCTAAGTTATCAGCTCTCAAGTGCAAGGCTGCTGGCCAATCCTCGCCTACTTCCACTGTCTATCGGGGAATTTATGGTCCTTGGACCGTTGATCCTTCCGACGTTAGAGAGGTTCCTTTCACTTGCTCTTTCTCTTCTTTTCTTTTAATCCTATTGTTGTCTCCTACAATTTGGGGTTTGCGGTTGCCCTGTAACTGATTATGTGTATTAGCTCCAATATTCGTGTGTATTATGGTTTGTTACTGTTCATCTCCCCACCTTAACTGCCCATTTACTTCAAATTTGGCCTGAATTGTTAAGAACTTGTAAGTTACGTCCAAGGATGGGTCAGGTAGTTGTTCCACACTTGATGATTCTATTGACTGAGCTAAGTAAGGGCATGACTCTGATACCATGTTAGGAACCACAAACCTCCACAATTATATGATGTTGTCCACTTTGAGCATATGTTCTCATGATTTTGCTTTTGGTTTCCCCAAAAGGCTTCATACCAATATAGATGTATTCCTTACTTATAAATTCATCATCATCCCTTTAATTAGCTAACGTGGAACTCTCTCCCAACCATCCTCAACAAGATCATCATGGTGCCTGGCTAAATAATTATGTGTCATAGTGCTTAAACCTGATAGCAGCATTCATTTACTAGTAATTTAGGATTTGATGTGTACTCGCACAATAACTCATTGGTGAAGACAGTCTCATGCGGTTAAACCTGCGTAGACAGTCTATGACAAGATGTTAGACAGTCTCAAATATTTCAGTGATAATTTGCTTACTGTGGCAGGTAATTTTATATAGAGCGGGCTTAGTGACAGCTGCTACCTCTTTTGTGATAGCTTCATCAGTTGCTTTTTTACCCGATAACTCTTCATTGAGTGACACACTTAAGCAAAATCTTGATCTGTTATATGCCTTGGGCGGAGGAGGATTAGGCTTATCCCTAGTTTTGATTCACATATATGTAACAGCAATTAAGCGCACTCTTCAAGCTTTTTGGGTGCTTGGTGTTGCTGGATCTTTGGTAGCTTACGTAAATCTTGCACAACCAGCTGGGGACAGCTTAGTGCAGTATGTGGTCGATAACCCATCGGCTGTCTGGTTTATTGGTCCTCTCTTTGCAGCACTGACTGGACTTGTCTTCAAAGAAGGTATCGAGTATTTCTATTATCTTGTGGGTCTTTGACTTACTATGTGTCTTTAAAGTCGTATTGATGATGAAGCAAGCTAATAATAAGGGAGAAGACATTGAAGTTTACGAAGCTCGTATTTTTGTGAAGTCTCATAGATCACTAGTGCAGTCTTGATGAAGCTCGCAATAATAAGAAGAAAGAAGATATTGAGGGCTGGGTGTTGGACTTAATTATTAATCACACGCAGAGGTTTCTATTGTGATATTGGGTCATTTGATTTATCTATTCTGTCTCCCCGTGGTTTATTTTTGTCCCTCCTGGTCATTTTAAAGATACAAAAAATAGCCTGTGGTGTATGATGTCTGAAATGCAGTGAGACATATTTCAGAGTATAATATCAATCTGTCACGCCTACTTTAGGATTAGTATCGGTTTCAATTTCCAATACCTGTTTGTCCTCTATGCAGGTCTTTGCTATGGGAAGCTTGAGGCTGGAATTCTTACCTTTGTCATACCAACGCTACTACTAGGCCACCTGGTATGGTTCGGTTCGCAGTTCCTAATTGGAAACTTCATTGATGAATGATTAAGATCTTGTTTTTTTATTTATTGTTTAAAATTTGTGCTTGTTTTCTTATCATTTTTGTACTCTGAGTTTTATCCTTTTTAAGAAAACATTTGGATTCATATTCCAAAAATAAGTTTGTGAAAGCTACTTTTTTTTAGTTTTCAAAACTTGGTTATTTTTTGAAAATATATATTAAAAAAAAAGTAGATAAGAAAACAAGGAAACTCATGAGTTAGACTCTTCAACAAGAAGCGTGGCATGGTATAACATGTATGATAAGTTTTCAACCGTGGTACCTTGTTGCCTTGTAGTACTGTTTGCTTGCTTGCATTATTATGATGAAGGAATGTGCATCTTTTTGAGCCATAGACCTAAAGTCTTTGTAGCTTTGGAGGAGCCTGTACGCTAACTGTTTGGAGGGGCTTTGTTTGAAATGCAGAGTGGTTTGATGGACGATGGGGCCAAACTTGGTCTGTTAGGTTCATGGATGGCCCTGTTTGTGATATTTGCCGGAAGAAAGTTCACTCAGCCCATCAAGGTAATGTTTGAGCGAATGATGATTCTCTAAATCAGAAGACCCTATTTTGTAGTGAAAATAAAGACGTGAATATGTAGTGCATTTTATTGTTTGTTATTTACTTTCAGGATGATATTGGCGACAAATCTGTTTTCATGTTCAATGATCTTGGAGAGGACGAAAAGAAGGCGTTGATTGCAAAGCTTGAGCAGCAAGAGCTTGGTCAGAATGTTGATTAGAACATCTGAATGACACCCACCAGGAAGAAATGTTATCACTCGAGCTGCTTTTACTTCTTACTGCAGCTTTGTCACTAGTCCAGAGTTTATACATAACGCTACTACAACCCAAACTGTTCATGTTTTTTTTTTTTTCTTTTTTATTGGTGTATAATATCATATATTGACTCTTCTCAACATTTGTATATTTGCATGGGAGTGATTGTAATACGAGCATTCCTTTAGAAATCTTTCTCTTGGGTCTCAATTTATTTCGTGAATTTGTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTGTTTATCTCAATTAATTTTTCTATCCAATTCTTGAAAGGGTTTTCTTTAAAAATAAAATGAAATAAAATAAAATTTGGGCATGAGGATTATATCTCATCCCTCTAATAGTGAATTAGGGAATAAACCAATTAAAGTAAATCCAAACGACGAGGACAAAAATAAAATTTTAACCTAAATAATAATTTTCTTTTGATAGAGAGGAAGAACATTTTACTTCATATTTGTGAATGGACGGTTATACCCTTCGGTTCATGGCCGTGCGTAGCCCTAGGCACTTCAGAGACTTTTTATAACGTTCATGGCTGAGATTTATTTCTAACCAAATCCAACGGTTCAAAATTTCCAGCCGCTCCCTTATATTCTTACTAGACGGCGCTCTATCGCCTTTTTATAACGTTCATTGCACCGTCCTGATTCTTTCGCGAACTCTCGTTGGGATTCTAGGGTTCGCGATCCAGACAGTTCCTTACTGATCAACATGGTAAACTTCCTGCTACTTTCGATTATGCCTTTTTATCTCTACTGAATTTGGATCCAACAATTTTCACTTTCTTTCACGCTATTTTCAGGTTCTTCAAAACGATATTGATTTGCTCAATCCTCCGGCCGAACTTGAGAAGAGAAAACATAAGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGTTTGCTCTTTCGTTTAAATTCTTTTTGCTTTGTTTGATCTAATCTTTTCTCCGATAATGGTGATCGAGCTGTCTTGTGATTTATATATGCAGGATGTGAAGTGCCAGGGTTGCTTTAACATGTAAGTTTTCATCTTTTCTCATGTATTATGGTTATGTTACCTTTCTTTTTTCTGCAAGTTGTTGAAGTTGGGTTCTTAAGTGAGTAATGGCACATAACTCTTTGAATGAATAACAGAACCACTGTATTCAGTCATTCACAGACAGTCGTGGTATGTGGGAATTGCCAGTCGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGCTGCTCCTTCAGAAGAAAGGGTGACTAA

mRNA sequence

ACATTTCCTGGTGCGACGGAAACGGAGACGAGCGCCAGATTTTGTGGCGGAGAGAGTCCGAAATGGCGTGTGGATGTTTATGTGCCTCCATTCTTTCTCCCTCCAACCTTCTTTCTCTTGATTATTCAGCTGATATTAAAACCAAGTTGCTGCTTCCTTCCCCAGTTGCTTTCCCTTCACCATCTAAGTTATCAGCTCTCAAGTGCAAGGCTGCTGGCCAATCCTCGCCTACTTCCACTGTCTATCGGGGAATTTATGGTCCTTGGACCGTTGATCCTTCCGACGTTAGAGAGGTAATTTTATATAGAGCGGGCTTAGTGACAGCTGCTACCTCTTTTGTGATAGCTTCATCAGTTGCTTTTTTACCCGATAACTCTTCATTGAGTGACACACTTAAGCAAAATCTTGATCTGTTATATGCCTTGGGCGGAGGAGGATTAGGCTTATCCCTAGTTTTGATTCACATATATGTAACAGCAATTAAGCGCACTCTTCAAGCTTTTTGGGTGCTTGGTGTTGCTGGATCTTTGGTAGCTTACGTAAATCTTGCACAACCAGCTGGGGACAGCTTAGTGCAGTATGTGGTCGATAACCCATCGGCTGTCTGGTTTATTGGTCCTCTCTTTGCAGCACTGACTGGACTTGTCTTCAAAGAAGGTCTTTGCTATGGGAAGCTTGAGGCTGGAATTCTTACCTTTGTCATACCAACGCTACTACTAGGCCACCTGAGTGGTTTGATGGACGATGGGGCCAAACTTGGTCTGTTAGGTTCATGGATGGCCCTGTTTGTGATATTTGCCGGAAGAAAGTTCACTCAGCCCATCAAGGATGATATTGGCGACAAATCTGTTTTCATGTTCAATGATCTTGGAGAGGACGAAAAGAAGGCGTTGATTGCAAAGCTTGAGCAGCAAGAGCTTGGTCAGAATGTTCTTCAAAACGATATTGATTTGCTCAATCCTCCGGCCGAACTTGAGAAGAGAAAACATAAGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGATGTGAAGTGCCAGGGTTGCTTTAACATAACCACTGTATTCAGTCATTCACAGACAGTCGTGGTATGTGGGAATTGCCAGTCGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGCTGCTCCTTCAGAAGAAAGGGTGACTAA

Coding sequence (CDS)

ATGGCGTGTGGATGTTTATGTGCCTCCATTCTTTCTCCCTCCAACCTTCTTTCTCTTGATTATTCAGCTGATATTAAAACCAAGTTGCTGCTTCCTTCCCCAGTTGCTTTCCCTTCACCATCTAAGTTATCAGCTCTCAAGTGCAAGGCTGCTGGCCAATCCTCGCCTACTTCCACTGTCTATCGGGGAATTTATGGTCCTTGGACCGTTGATCCTTCCGACGTTAGAGAGGTAATTTTATATAGAGCGGGCTTAGTGACAGCTGCTACCTCTTTTGTGATAGCTTCATCAGTTGCTTTTTTACCCGATAACTCTTCATTGAGTGACACACTTAAGCAAAATCTTGATCTGTTATATGCCTTGGGCGGAGGAGGATTAGGCTTATCCCTAGTTTTGATTCACATATATGTAACAGCAATTAAGCGCACTCTTCAAGCTTTTTGGGTGCTTGGTGTTGCTGGATCTTTGGTAGCTTACGTAAATCTTGCACAACCAGCTGGGGACAGCTTAGTGCAGTATGTGGTCGATAACCCATCGGCTGTCTGGTTTATTGGTCCTCTCTTTGCAGCACTGACTGGACTTGTCTTCAAAGAAGGTCTTTGCTATGGGAAGCTTGAGGCTGGAATTCTTACCTTTGTCATACCAACGCTACTACTAGGCCACCTGAGTGGTTTGATGGACGATGGGGCCAAACTTGGTCTGTTAGGTTCATGGATGGCCCTGTTTGTGATATTTGCCGGAAGAAAGTTCACTCAGCCCATCAAGGATGATATTGGCGACAAATCTGTTTTCATGTTCAATGATCTTGGAGAGGACGAAAAGAAGGCGTTGATTGCAAAGCTTGAGCAGCAAGAGCTTGGTCAGAATGTTCTTCAAAACGATATTGATTTGCTCAATCCTCCGGCCGAACTTGAGAAGAGAAAACATAAGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGATGTGAAGTGCCAGGGTTGCTTTAACATAACCACTGTATTCAGTCATTCACAGACAGTCGTGGTATGTGGGAATTGCCAGTCGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGCTGCTCCTTCAGAAGAAAGGGTGACTAA

Protein sequence

MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
Homology
[Close]
BLAST of CmoCh08G000280 vs. ExPASy Swiss-Prot
Match: Q9M2F1 (40S ribosomal protein S27-2 OS=Arabidopsis thaliana OX=3702 GN=RPS27B PE=2 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-42
Identity = 81/85 (95.29%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2   VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRKGD 375
           Q++LCQPTGG+A+LTEGCSFRRKGD
Sbjct: 62  QTILCQPTGGKAKLTEGCSFRRKGD 86

[Close]
BLAST of CmoCh08G000280 vs. ExPASy Swiss-Prot
Match: Q96564 (40S ribosomal protein S27 OS=Hordeum vulgare OX=4513 GN=RPS27 PE=3 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 4.8e-40
Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC  C
Sbjct: 2   VLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRKGD 375
           Q+VLCQPTGG+ARLTEGCSFRRKGD
Sbjct: 62  QTVLCQPTGGKARLTEGCSFRRKGD 86

[Close]
BLAST of CmoCh08G000280 vs. ExPASy Swiss-Prot
Match: O64650 (40S ribosomal protein S27-1 OS=Arabidopsis thaliana OX=3702 GN=RPS27A PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 8.1e-40
Identity = 76/83 (91.57%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNC
Sbjct: 2   VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRK 373
           Q++LC PTGG+A+LTEGCSFR+K
Sbjct: 62  QTLLCTPTGGKAKLTEGCSFRKK 84

[Close]
BLAST of CmoCh08G000280 vs. ExPASy Swiss-Prot
Match: Q8L953 (40S ribosomal protein S27-3 OS=Arabidopsis thaliana OX=3702 GN=RPS27D PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-39
Identity = 77/83 (92.77%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLL+PP ELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2   VLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRK 373
           Q+VLCQPTGG+ARL EGCSFR+K
Sbjct: 62  QTVLCQPTGGKARLQEGCSFRKK 84

[Close]
BLAST of CmoCh08G000280 vs. ExPASy Swiss-Prot
Match: P47903 (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii OX=3055 GN=RPS27 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.2e-36
Identity = 73/85 (85.88%), Postives = 76/85 (89.41%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VL +DIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C
Sbjct: 2   VLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRKGD 375
            SVLC PTG   RLTEGCSFRRK D
Sbjct: 62  SSVLCTPTGWPRRLTEGCSFRRKSD 86

[Close]
BLAST of CmoCh08G000280 vs. ExPASy TrEMBL
Match: A0A6J1H5C2 (uncharacterized protein LOC111460706 OS=Cucurbita moschata OX=3662 GN=LOC111460706 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 1.1e-156
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV
Sbjct: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA
Sbjct: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA
Sbjct: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA
Sbjct: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 291
           LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Sbjct: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 290

[Close]
BLAST of CmoCh08G000280 vs. ExPASy TrEMBL
Match: A0A6J1KX72 (uncharacterized protein LOC111497955 OS=Cucurbita maxima OX=3661 GN=LOC111497955 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.5e-155
Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILSPSNLLSL+YSA IKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV
Sbjct: 29  MACGCLCASILSPSNLLSLNYSAHIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 88

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA
Sbjct: 89  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 148

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA
Sbjct: 149 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 208

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWFIGPLFAALTGLVFKEGLCYGKLEAG+LTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA
Sbjct: 209 VWFIGPLFAALTGLVFKEGLCYGKLEAGVLTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 268

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 291
           LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Sbjct: 269 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 318

[Close]
BLAST of CmoCh08G000280 vs. ExPASy TrEMBL
Match: A0A0A0KC45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091330 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 8.2e-136
Identity = 253/289 (87.54%), Postives = 268/289 (92.73%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILS   L SL+YSA  KTKLL  SPV+FP PSKLSA KCKAAGQ+SP+ TV
Sbjct: 1   MACGCLCASILSSPKLPSLNYSALTKTKLLRRSPVSFPPPSKLSAFKCKAAGQTSPSPTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           Y+GIYGPWTVD SDVREVILYRAGLVTAATSFVIASSVAFLPD+SSL DTLKQNLDLLY 
Sbjct: 61  YQGIYGPWTVDSSDVREVILYRAGLVTAATSFVIASSVAFLPDSSSLGDTLKQNLDLLYV 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSL LIHIYVTAIKRTLQA WVLGVAGSLV Y+NL+QPAG+SLVQYVVDNPSA
Sbjct: 121 LGGGGLGLSLFLIHIYVTAIKRTLQALWVLGVAGSLVTYLNLSQPAGESLVQYVVDNPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWF+GPL+AALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHL+GLMDDG KL LLGSWMA
Sbjct: 181 VWFVGPLYAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLTGLMDDGVKLALLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN 290
           LFVIFAGRKF+QPIKDDIGDKSVF+FN LGEDEKKALIAKLEQQE+ QN
Sbjct: 241 LFVIFAGRKFSQPIKDDIGDKSVFLFNALGEDEKKALIAKLEQQEVSQN 289

[Close]
BLAST of CmoCh08G000280 vs. ExPASy TrEMBL
Match: A0A5D3DMA3 (DUF2301 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001900 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 1.1e-135
Identity = 254/289 (87.89%), Postives = 268/289 (92.73%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILS   L SL+YSA  KTKLL  SPV+FPSPSKLSALKCKAAGQ+SP+ TV
Sbjct: 1   MACGCLCASILSYPKLPSLNYSALTKTKLLRRSPVSFPSPSKLSALKCKAAGQTSPSPTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           Y+GIYGPWTVD SDVREVILYRAGLVTAATSFVIASSVAFLPDNSSL DTLKQNLDLLY 
Sbjct: 61  YQGIYGPWTVDSSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLGDTLKQNLDLLYV 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSL LIHIYVTAIKRTLQA WVLGVAGSLV Y NLAQPAG+SLVQYVVDNPSA
Sbjct: 121 LGGGGLGLSLFLIHIYVTAIKRTLQALWVLGVAGSLVTYSNLAQPAGESLVQYVVDNPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWF+GPL+AALTGLVFKEGLCYGKLEAGILTF+IPTLLLGHL+GLMDDG KL LLGSWMA
Sbjct: 181 VWFVGPLYAALTGLVFKEGLCYGKLEAGILTFIIPTLLLGHLTGLMDDGVKLALLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN 290
           LFVIFAGRKF+QPIKDDIGDKSVF+FN LGE+EKKALIAKLEQQ + QN
Sbjct: 241 LFVIFAGRKFSQPIKDDIGDKSVFIFNALGEEEKKALIAKLEQQGVSQN 289

[Close]
BLAST of CmoCh08G000280 vs. ExPASy TrEMBL
Match: E5GB55 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 3.1e-135
Identity = 252/289 (87.20%), Postives = 268/289 (92.73%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILS   L SL+YSA  KT+LL  SPV+FPSPSKLSALKCKAAGQ+SP+ TV
Sbjct: 1   MACGCLCASILSYPKLPSLNYSALTKTRLLRRSPVSFPSPSKLSALKCKAAGQTSPSPTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           Y+GIYGPWTVD SDVREVILYR GLVTAATSFVIASSVAFLPDNSSL DTLKQNLDLLY 
Sbjct: 61  YQGIYGPWTVDSSDVREVILYRGGLVTAATSFVIASSVAFLPDNSSLGDTLKQNLDLLYV 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSL LIHIYVTAIKRTLQA WVLGVAGSLV Y+NLAQPAG+SLVQYVVDNPSA
Sbjct: 121 LGGGGLGLSLFLIHIYVTAIKRTLQALWVLGVAGSLVTYLNLAQPAGESLVQYVVDNPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWF+GPL+AALTGLVFKEGLCYGKLEAGILTF+IPTLLLGHL+GLMDDG KL LLGSWMA
Sbjct: 181 VWFVGPLYAALTGLVFKEGLCYGKLEAGILTFIIPTLLLGHLTGLMDDGVKLALLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN 290
           LFVIFAGRKF+QPIKDDIGDKSVF+FN LGE+EKKALIAKLEQQ + QN
Sbjct: 241 LFVIFAGRKFSQPIKDDIGDKSVFIFNALGEEEKKALIAKLEQQGVSQN 289

[Close]
BLAST of CmoCh08G000280 vs. NCBI nr
Match: KAG6592828.1 (40S ribosomal protein S27-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 717.6 bits (1851), Expect = 5.5e-203
Identity = 368/379 (97.10%), Postives = 371/379 (97.89%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILSPSNL SLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV
Sbjct: 1   MACGCLCASILSPSNLRSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLP+NSSLSDTLKQNLDLLYA
Sbjct: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPENSSLSDTLKQNLDLLYA 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA
Sbjct: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMD+GAKLGLLGSWMA
Sbjct: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDNGAKLGLLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN-----VLQNDI 300
           LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQEL  +     VLQNDI
Sbjct: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELDSSLLINMVLQNDI 300

Query: 301 DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQ 360
           DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQ
Sbjct: 301 DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQ 360

Query: 361 PTGGRARLTEGCSFRRKGD 375
           PTGGRARLTEGCSFRRKGD
Sbjct: 361 PTGGRARLTEGCSFRRKGD 379

[Close]
BLAST of CmoCh08G000280 vs. NCBI nr
Match: XP_022959722.1 (uncharacterized protein LOC111460706 [Cucurbita moschata])

HSP 1 Score: 562.8 bits (1449), Expect = 2.3e-156
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV
Sbjct: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA
Sbjct: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA
Sbjct: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA
Sbjct: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 291
           LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Sbjct: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 290

[Close]
BLAST of CmoCh08G000280 vs. NCBI nr
Match: XP_023004744.1 (uncharacterized protein LOC111497955 [Cucurbita maxima])

HSP 1 Score: 557.8 bits (1436), Expect = 7.3e-155
Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILSPSNLLSL+YSA IKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV
Sbjct: 29  MACGCLCASILSPSNLLSLNYSAHIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 88

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA
Sbjct: 89  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 148

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA
Sbjct: 149 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 208

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWFIGPLFAALTGLVFKEGLCYGKLEAG+LTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA
Sbjct: 209 VWFIGPLFAALTGLVFKEGLCYGKLEAGVLTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 268

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 291
           LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Sbjct: 269 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 318

[Close]
BLAST of CmoCh08G000280 vs. NCBI nr
Match: KAG7025235.1 (hypothetical protein SDJN02_11730 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553.1 bits (1424), Expect = 1.8e-153
Identity = 286/290 (98.62%), Postives = 288/290 (99.31%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MAC CLCASILSPSNL SLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV
Sbjct: 1   MACVCLCASILSPSNLPSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLP+NSSLSDTLKQNLDLLYA
Sbjct: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPENSSLSDTLKQNLDLLYA 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA
Sbjct: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMD+GAKLGLLGSWMA
Sbjct: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDNGAKLGLLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 291
           LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Sbjct: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 290

[Close]
BLAST of CmoCh08G000280 vs. NCBI nr
Match: XP_023515274.1 (uncharacterized protein LOC111779356 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.4 bits (1422), Expect = 3.1e-153
Identity = 284/290 (97.93%), Postives = 287/290 (98.97%), Query Frame = 0 

Query: 1   MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTV 60
           MACGCLCASILSPSNLLSL+YSA IKTKLLLPSPVAFPSPSKLSALKCKAA QSSPTSTV
Sbjct: 1   MACGCLCASILSPSNLLSLNYSAHIKTKLLLPSPVAFPSPSKLSALKCKAAAQSSPTSTV 60

Query: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120
           YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA
Sbjct: 61  YRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYA 120

Query: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSA 180
           LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSL QYVV+NPSA
Sbjct: 121 LGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLAQYVVENPSA 180

Query: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240
           VWFIGPLFAALTGLVFKEGLCYGKLEAG+LTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA
Sbjct: 181 VWFIGPLFAALTGLVFKEGLCYGKLEAGVLTFVIPTLLLGHLSGLMDDGAKLGLLGSWMA 240

Query: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 291
           LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Sbjct: 241 LFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV 290

[Close]
BLAST of CmoCh08G000280 vs. TAIR 10
Match: AT1G28140.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 352.1 bits (902), Expect = 5.7e-97
Identity = 171/237 (72.15%), Postives = 201/237 (84.81%), Query Frame = 0 

Query: 51  AGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDT 110
           + Q +   TVY+G+YGPWT+D +DV+EVILYR+GLVTAA SFV ASS AFLP +S LS+T
Sbjct: 44  SSQGAVDGTVYKGVYGPWTIDQADVKEVILYRSGLVTAAASFVAASSAAFLPGDSWLSET 103

Query: 111 LKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSL 170
           +KQN DL Y +G  GLGLSL LIHIYVT IKRTLQA W LG  GS   Y  LA+PAGD+L
Sbjct: 104 IKQNHDLFYFVGASGLGLSLFLIHIYVTEIKRTLQALWALGFVGSFATYAALARPAGDNL 163

Query: 171 VQYVVDNPSAVWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGA 230
           V YVVD+PSAVWF+GPLFA+LTGLVFKEGLCYGKLEAG+LTF+IP++LLGHLSGLM+D  
Sbjct: 164 VHYVVDHPSAVWFVGPLFASLTGLVFKEGLCYGKLEAGLLTFIIPSVLLGHLSGLMNDEV 223

Query: 231 KLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELG 288
           KL LLG+WMALF++FAGRKFTQPIKDDIGDKSVF F  L +DEKKA++ KLEQ++LG
Sbjct: 224 KLVLLGTWMALFLVFAGRKFTQPIKDDIGDKSVFTFMSLSDDEKKAIVEKLEQEKLG 280

[Close]
BLAST of CmoCh08G000280 vs. TAIR 10
Match: AT3G61110.1 (ribosomal protein S27 )

HSP 1 Score: 175.6 bits (444), Expect = 7.3e-44
Identity = 81/85 (95.29%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2   VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRKGD 375
           Q++LCQPTGG+A+LTEGCSFRRKGD
Sbjct: 62  QTILCQPTGGKAKLTEGCSFRRKGD 86

[Close]
BLAST of CmoCh08G000280 vs. TAIR 10
Match: AT2G45710.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 166.0 bits (419), Expect = 5.8e-41
Identity = 76/83 (91.57%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNC
Sbjct: 2   VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRK 373
           Q++LC PTGG+A+LTEGCSFR+K
Sbjct: 62  QTLLCTPTGGKAKLTEGCSFRKK 84

[Close]
BLAST of CmoCh08G000280 vs. TAIR 10
Match: AT5G47930.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 165.6 bits (418), Expect = 7.5e-41
Identity = 77/83 (92.77%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLL+PP ELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 2   VLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRK 373
           Q+VLCQPTGG+ARL EGCSFR+K
Sbjct: 62  QTVLCQPTGGKARLQEGCSFRKK 84

[Close]
BLAST of CmoCh08G000280 vs. TAIR 10
Match: AT3G61111.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-35
Identity = 69/85 (81.18%), Postives = 76/85 (89.41%), Query Frame = 0 

Query: 290 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 349
           VLQNDIDLLNPPAELEKRKHKLKRLV SPNS+FM V+C  C NITT+FSHSQTVVVCG C
Sbjct: 2   VLQNDIDLLNPPAELEKRKHKLKRLVPSPNSYFMLVRCSDCINITTIFSHSQTVVVCGKC 61

Query: 350 QSVLCQPTGGRARLTEGCSFRRKGD 375
           Q+VLCQPTGG+A+LT GCSFR+  D
Sbjct: 62  QNVLCQPTGGKAKLTVGCSFRKLTD 86

The following BLAST results are available for this feature:
BLAST of CmoCh08G000280 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M2F11.0e-4295.2940S ribosomal protein S27-2 OS=Arabidopsis thaliana OX=3702 GN=RPS27B PE=2 SV=2[more]
Q965644.8e-4092.9440S ribosomal protein S27 OS=Hordeum vulgare OX=4513 GN=RPS27 PE=3 SV=2[more]
O646508.1e-4091.5740S ribosomal protein S27-1 OS=Arabidopsis thaliana OX=3702 GN=RPS27A PE=3 SV=1[more]
Q8L9531.1e-3992.7740S ribosomal protein S27-3 OS=Arabidopsis thaliana OX=3702 GN=RPS27D PE=2 SV=2[more]
P479034.2e-3685.8840S ribosomal protein S27 OS=Chlamydomonas reinhardtii OX=3055 GN=RPS27 PE=3 SV=... [more]
BLAST of CmoCh08G000280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H5C21.1e-156100.00uncharacterized protein LOC111460706 OS=Cucurbita moschata OX=3662 GN=LOC1114607... [more]
A0A6J1KX723.5e-15598.97uncharacterized protein LOC111497955 OS=Cucurbita maxima OX=3661 GN=LOC111497955... [more]
A0A0A0KC458.2e-13687.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091330 PE=4 SV=1[more]
A0A5D3DMA31.1e-13587.89DUF2301 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
E5GB553.1e-13587.20Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
BLAST of CmoCh08G000280 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592828.15.5e-20397.1040S ribosomal protein S27-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022959722.12.3e-156100.00uncharacterized protein LOC111460706 [Cucurbita moschata][more]
XP_023004744.17.3e-15598.97uncharacterized protein LOC111497955 [Cucurbita maxima][more]
KAG7025235.11.8e-15398.62hypothetical protein SDJN02_11730 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023515274.13.1e-15397.93uncharacterized protein LOC111779356 [Cucurbita pepo subsp. pepo][more]
BLAST of CmoCh08G000280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G28140.15.7e-9772.15unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G61110.17.3e-4495.29ribosomal protein S27 [more]
AT2G45710.15.8e-4191.57Zinc-binding ribosomal protein family protein [more]
AT5G47930.17.5e-4192.77Zinc-binding ribosomal protein family protein [more]
AT3G61111.11.2e-3581.18Zinc-binding ribosomal protein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000592Ribosomal protein S27PFAMPF01667Ribosomal_S27ecoord: 318..372
e-value: 5.0E-26
score: 90.2
IPR000592Ribosomal protein S27PROSITEPS01168RIBOSOMAL_S27Ecoord: 326..358
IPR000592Ribosomal protein S27HAMAPMF_00371Ribosomal_S27ecoord: 312..372
score: 16.715874
IPR019275Protein of unknown function DUF2301PFAMPF10063DUF2301coord: 128..266
e-value: 1.4E-54
score: 184.2
IPR019275Protein of unknown function DUF2301PANTHERPTHR36716F3H9.20 PROTEINcoord: 36..286
IPR023407Ribosomal protein S27, zinc-binding domain superfamilyGENE3D2.20.25.100coord: 293..373
e-value: 2.0E-47
score: 161.0
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 318..372

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G000280.1CmoCh08G000280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome