CmoCh08G000230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G000230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Coiled-coil domain-containing protein SCD2
Location	Cmo_Chr08: 123738 .. 126499 (+)
RNA-Seq Expression	CmoCh08G000230
Synteny	CmoCh08G000230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGTTGTGGTCCTTTTCTCCAAGACATGGGAATAGCAGTTGTCTTATCTTTTTGGATGGGGGCTGGGGAGGGGTCTCCTTTTTCATGCTCTATCTATGTTGATGTACCTTCTTTCTCCTAATATAATATATGCATCACATGCACTGAAACCACTGATGGAATTTAGGGAAAAAAAATCACTTCCTGGTTCAAGTATCCAGTACTCATAACTAACCTAGGAAGGAGATGAGGTTAAAAAAGAAACTGATAGCTTTAGCTGGGAAGGGAAGTTGGTGTTCTGGATGCAAAGCTGCTAAAGGAATCATTTCTTTAAGGAAAGTAAGATTTGGATTATGTTGTTGATTAAATATTTCAAGGTAAGAACATTGTTTGTATTTTAAGAATAGTAGCTTTCCTACTTTAGGATCATAAGAATAGTAGCCTTCATACTTTAGGATCATAATTATCCACGTGTAAATGTGATCTTAAATAAAAATCTTAAAATGCATTAAAGCAAAATCATAATTCTAGATTATCCAAGATTCCAAAATTTGTAATTATCCAAGATTCCAAAGTTTGTAATAAACCTTGATTCCAAAATTTGTAACCCTCCGAGAATAAATAAACTTGATTCTTTTTAATATGACATGAATTGCATCTTGTAATAAGTTTTATAACATTTAATTTCATTATAATATACTCCGTTTTCACGATTTCAATCTCTAATGACTACATGGCGATACTTTCTTAGCAAACTCATGGAAGTCTTTGCATGCTCTGAGGTAAAACCAGGATGGGAGATTTACTTGTGCCAAGATGAGCCCTGAAGTTCGACACCATCTCTGACCATTTTCTCTAAGAGTGATAGAACATCCTGCAGTTCGTTACTTCGTGAAGAGTATCCTACCATCAATCCAGTCCAAGCCACCTTGTTTTTTTTTTTCAGTCATCATATCAAAGACGAGCTCAGCTGCTTCTAACCAACCACACTTAACATACATGTTCATGACTGCAGCCTCGAAGGTCTAACATAGAAGGATCATCAAAGAAACTTAAGAGGCTTGGAAAAATGGATTGGTTGGGGAGGATCATCAAAGAAACATAGAAGGTCCACCTGCACCTTTCTGAACTACAAATTTGTTTCGGGGTTTTTGTGCTTACCAAAATCGGGAGAAAGTGCAAGATTGGAAATTTCATCTTATTCTCGTTCTTTTACGGATTTTGGGCCTTGAATTGTTAGGAGTGGACCGGCCCTAAATGATAGCATGGACCTTGCCATAATGCCTGGGTTGCTTTGCCAAAGTTTCAGAAGTTTTTTCTTTTCAGCCTCGGGCATGGCTTATTCCTGGGTTGATTTTCGGGGTCTTTTCCGCTTCAGTTTCTGTGCATTTGGCTGTTGTTCTGTTTGAGCAGGAATAGGATGGAAAGGTTCTTCCGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGGTACTGCCCCATATCCCTCTCTCGCTTCTTCTTCATTTCGTTGAATTCATTCTAGTTTCCCTCGAAATTTTGCAGCGGAAAGACTTCCTTGCTTTTTCAGTTTGCTTTTAATTTGGGTTTGGAGGGAAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGCATCTCTCTCCTTGTTTCTGTCTCTGTGTGTTGTGGTCATATTGAATAGAATGTTGCATATTTGCTGAAACTTAGAACCCTTTGGACCTAACATCCAGGGAGTTGATCCAGCATCCGAAACCTTTCAGCGCATACAAATGAAGTCGGTGGTCATTCCATTCTTTATCCTAATTAAATGACGATCGTCCTTCACTTGCTTTACTTGAACGTGTGAATTCTCTAATTCTGACTTCAGGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGTCTTCATATTTTCCCATGTTTTTTATCTTTTCTCTGTGCATTACTATGTATTTCTGTGGGTTTTTATTCCCTTTTTCATTTCACCTTCTATTTGTAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCGAAGTGGGTTTGCATCTCTCAGAACTTCCAATGAATAAATTACTCTCCTAGATGACACCCTCTTCTTTGCTGCTTCTAACTTGAAAGATTTTTCAGTCAGTGTAGGCCTTGCCAGCTTGTGTTGTCTGATACCCACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTTAGTTTAAGCTGACTGACTGCTCAACCCAAATTCAAAGCAGTTGACCCCATTTTTTGTTATTTGTGTATTGCATGGCAATTTCAGAAAATACAAATGATAAGTGGTGCAAAGTGATTGTGTTGGCTTCTTGATGGTGGTTAACTGATATGCCCTTTTGGCCACCTGTAGTGAACTATTTCTGGTTTATGTTGAAGGTGATGGGTCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGAGTGTTGTTTGAGGACTAAAAGTGCAAAATACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAGTTTCTGAAGACATTACAGAATAA

mRNA sequence

ATGAAATGTTGTGGTCCTTTTCTCCAAGACATGGGAATAGCAGTTGTCTTATCTTTTTGGATGGGGGCTGGGGAGGGGAATAGGATGGAAAGGTTCTTCCGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGCGGAAAGACTTCCTTGCTTTTTCAGTTTGCTTTTAATTTGGGTTTGGAGGGAAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGGAGTTGATCCAGCATCCGAAACCTTTCAGCGCATACAAATGAAGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCGAATCAGTGTAGGCCTTGCCAGCTTGTGTTGTCTGATACCCACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGGTCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGAGTGTTGTTTGAGGACTAAAAGTGCAAAATACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAGTTTCTGAAGACATTACAGAATAA

Coding sequence (CDS)

ATGAAATGTTGTGGTCCTTTTCTCCAAGACATGGGAATAGCAGTTGTCTTATCTTTTTGGATGGGGGCTGGGGAGGGGAATAGGATGGAAAGGTTCTTCCGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGCGGAAAGACTTCCTTGCTTTTTCAGTTTGCTTTTAATTTGGGTTTGGAGGGAAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGGAGTTGATCCAGCATCCGAAACCTTTCAGCGCATACAAATGAAGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCGAATCAGTGTAGGCCTTGCCAGCTTGTGTTGTCTGATACCCACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGGTCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGAGTGTTGTTTGAGGACTAAAAGTGCAAAATACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAGTTTCTGAAGACATTACAGAATAA

Protein sequence

MKCCGPFLQDMGIAVVLSFWMGAGEGNRMERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE

Homology

[Close]

BLAST of CmoCh08G000230 vs. ExPASy TrEMBL
Match: A0A6J1H6C8 (uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460863 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.8e-135
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 29  MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 88
           MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL
Sbjct: 1   MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 60

Query: 89  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 148
           ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE
Sbjct: 61  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 120

Query: 149 RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV 208
           RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV
Sbjct: 121 RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV 180

Query: 209 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 181 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 233

[Close]

BLAST of CmoCh08G000230 vs. ExPASy TrEMBL
Match: A0A6J1H622 (uncharacterized protein LOC111460863 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460863 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.5e-131
Identity = 229/233 (98.28%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 29  MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 88
           MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL
Sbjct: 1   MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 60

Query: 89  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 148
           ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE
Sbjct: 61  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 120

Query: 149 RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV 208
           RRCQEKYANPRGRDLAMVRTLALCHNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWV
Sbjct: 121 RRCQEKYANPRGRDLAMVRTLALCHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWV 180

Query: 209 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 181 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 230

[Close]

BLAST of CmoCh08G000230 vs. ExPASy TrEMBL
Match: A0A6J1KWJ2 (uncharacterized protein LOC111498201 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498201 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.8e-129
Identity = 223/228 (97.81%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 93
           RFFSVRQIQTQCD SHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP
Sbjct: 3   RFFSVRQIQTQCDPSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 62

Query: 94  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 153
           YLSQGVDPASETFQRIQMKYLED+EGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 63  YLSQGVDPASETFQRIQMKYLEDNEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122

Query: 154 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 213
           KYANPRGRDLAMVRTLAL HNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 123 KYANPRGRDLAMVRTLALSHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182

Query: 214 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           IRGDGSGW ILRSINNCGN+CCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 183 IRGDGSGWLILRSINNCGNDCCLRTKSAKYSIALQFLSLEEVSEDITE 230

[Close]

BLAST of CmoCh08G000230 vs. ExPASy TrEMBL
Match: A0A6J1KU11 (uncharacterized protein LOC111498201 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498201 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124
Identity = 219/228 (96.05%), Postives = 222/228 (97.37%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 93
           RFFSVRQIQTQCD SHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP
Sbjct: 3   RFFSVRQIQTQCDPSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 62

Query: 94  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 153
           YLSQGVDPASETFQRIQMKYLED+EGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 63  YLSQGVDPASETFQRIQMKYLEDNEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122

Query: 154 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 213
           KYANPRGRDLAMVRTLAL HNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 123 KYANPRGRDLAMVRTLALSHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182

Query: 214 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           IRGDGSGW ILRSINNCGN+CCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 183 IRGDGSGWLILRSINNCGNDCCLRTKSAKYSIALQFLSLEEVSEDITE 227

[Close]

BLAST of CmoCh08G000230 vs. ExPASy TrEMBL
Match: A0A1S3CAT0 (uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122
Identity = 208/228 (91.23%), Postives = 219/228 (96.05%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 93
           +FFSV+QI T+C+SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP
Sbjct: 3   KFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 62

Query: 94  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 153
           YLSQGVDP SETF+RIQMKYLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQ 
Sbjct: 63  YLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQA 122

Query: 154 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 213
           KYANPRGRD+AMVRTLALCHNA+SLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 123 KYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182

Query: 214 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           IRGDG+GWFILRSINNCGN+CCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 183 IRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRE 230

[Close]

BLAST of CmoCh08G000230 vs. NCBI nr
Match: XP_022959968.1 (uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959970.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959971.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata])

HSP 1 Score: 491.1 bits (1263), Expect = 5.9e-135
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 29  MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 88
           MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL
Sbjct: 1   MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 60

Query: 89  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 148
           ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE
Sbjct: 61  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 120

Query: 149 RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV 208
           RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV
Sbjct: 121 RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV 180

Query: 209 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 181 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 233

[Close]

BLAST of CmoCh08G000230 vs. NCBI nr
Match: XP_022959972.1 (uncharacterized protein LOC111460863 isoform X2 [Cucurbita moschata])

HSP 1 Score: 476.9 bits (1226), Expect = 1.1e-130
Identity = 229/233 (98.28%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 29  MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 88
           MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL
Sbjct: 1   MERFFRFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKL 60

Query: 89  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 148
           ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE
Sbjct: 61  ENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEE 120

Query: 149 RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWV 208
           RRCQEKYANPRGRDLAMVRTLALCHNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWV
Sbjct: 121 RRCQEKYANPRGRDLAMVRTLALCHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWV 180

Query: 209 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 181 PTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 230

[Close]

BLAST of CmoCh08G000230 vs. NCBI nr
Match: XP_023005109.1 (uncharacterized protein LOC111498201 isoform X1 [Cucurbita maxima] >XP_023005110.1 uncharacterized protein LOC111498201 isoform X1 [Cucurbita maxima])

HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128
Identity = 223/228 (97.81%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 93
           RFFSVRQIQTQCD SHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP
Sbjct: 3   RFFSVRQIQTQCDPSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 62

Query: 94  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 153
           YLSQGVDPASETFQRIQMKYLED+EGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 63  YLSQGVDPASETFQRIQMKYLEDNEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122

Query: 154 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 213
           KYANPRGRDLAMVRTLAL HNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 123 KYANPRGRDLAMVRTLALSHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182

Query: 214 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           IRGDGSGW ILRSINNCGN+CCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 183 IRGDGSGWLILRSINNCGNDCCLRTKSAKYSIALQFLSLEEVSEDITE 230

[Close]

BLAST of CmoCh08G000230 vs. NCBI nr
Match: XP_023514984.1 (uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo] >XP_023514985.1 uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-127
Identity = 223/228 (97.81%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 93
           RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP
Sbjct: 3   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 62

Query: 94  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 153
           YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 63  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122

Query: 154 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 213
           KYANPRGRDLAMVRTLALCHNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 123 KYANPRGRDLAMVRTLALCHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182

Query: 214 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 262
           IRGDGSGWFILRSINNCGN+CCLRTKSAKYSIALQFLSLEEVSEDITE
Sbjct: 183 IRGDGSGWFILRSINNCGNDCCLRTKSAKYSIALQFLSLEEVSEDITE 227

[Close]

BLAST of CmoCh08G000230 vs. NCBI nr
Match: KAG7025230.1 (hypothetical protein SDJN02_11725 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.0 bits (1177), Expect = 5.5e-125
Identity = 225/255 (88.24%), Postives = 227/255 (89.02%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 93
           RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENKPP
Sbjct: 3   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENKPP 62

Query: 94  YLSQ--------GVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDF 153
           YLSQ        GVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDF
Sbjct: 63  YLSQASLSLFLSGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDF 122

Query: 154 FEE-------------------RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQ 213
           FEE                   RRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQ
Sbjct: 123 FEERSSYFPMFLFPFSFHLLFVRRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQ 182

Query: 214 LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIA 262
           LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN+CCLRTKSAKYSI+
Sbjct: 183 LVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGNDCCLRTKSAKYSIS 242

[Close]

BLAST of CmoCh08G000230 vs. TAIR 10
Match: AT3G23255.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 245.7 bits (626), Expect = 4.0e-65
Identity = 125/233 (53.65%), Postives = 165/233 (70.82%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSH---SIMLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNRRK 93
           RFF  +  ++  D +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R+K
Sbjct: 4   RFFPTK--RSSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHRKK 63

Query: 94  LENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRT--LPVAVVIDDFGDF 153
           +E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI KYF+AFHLH    LP AV+IDDFGD+
Sbjct: 64  IESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFGDY 123

Query: 154 FEERRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYK 213
           F +        N R RD+AMVRTLALCHNA+  AN+   C+LVLS+T+HG+SPR +FIYK
Sbjct: 124 FSK---LNSVMNSRARDMAMVRTLALCHNAIVDANRKALCELVLSETNHGDSPRSLFIYK 183

Query: 214 RWVPTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSED 259
           RW+P IFTI+G G G F+L S +          +SAKYSIALQ+L LE++ +D
Sbjct: 184 RWIPKIFTIKGHGDGSFLLTSNDT-------SERSAKYSIALQYLILEQIIDD 224

[Close]

BLAST of CmoCh08G000230 vs. TAIR 10
Match: AT3G23255.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 52 Blast hits to 52 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-63
Identity = 124/233 (53.22%), Postives = 164/233 (70.39%), Query Frame = 0


Query: 34  RFFSVRQIQTQCDSSH---SIMLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNRRK 93
           RFF  +  ++  D +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R+K
Sbjct: 4   RFFPTK--RSSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHRKK 63

Query: 94  LENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRT--LPVAVVIDDFGDF 153
           +E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI KYF+AFHLH    LP AV+IDDFGD+
Sbjct: 64  IESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFGDY 123

Query: 154 FEERRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYK 213
           F +        N R RD+AMVRTLALCHNA+  A +   C+LVLS+T+HG+SPR +FIYK
Sbjct: 124 FSK---LNSVMNSRARDMAMVRTLALCHNAIVDAKKAL-CELVLSETNHGDSPRSLFIYK 183

Query: 214 RWVPTIFTIRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSED 259
           RW+P IFTI+G G G F+L S +          +SAKYSIALQ+L LE++ +D
Sbjct: 184 RWIPKIFTIKGHGDGSFLLTSNDT-------SERSAKYSIALQYLILEQIIDD 223

The following BLAST results are available for this feature:

BLAST of CmoCh08G000230 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G000230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6C8	2.8e-135	100.00	uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H622	5.5e-131	98.28	uncharacterized protein LOC111460863 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KWJ2	6.8e-129	97.81	uncharacterized protein LOC111498201 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KU11	1.3e-124	96.05	uncharacterized protein LOC111498201 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3CAT0	2.1e-122	91.23	uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=...	[more]

BLAST of CmoCh08G000230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959968.1	5.9e-135	100.00	uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_0229599...	[more]
XP_022959972.1	1.1e-130	98.28	uncharacterized protein LOC111460863 isoform X2 [Cucurbita moschata]	[more]
XP_023005109.1	1.4e-128	97.81	uncharacterized protein LOC111498201 isoform X1 [Cucurbita maxima] >XP_023005110...	[more]
XP_023514984.1	2.6e-127	97.81	uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo] >XP_023514985....	[more]
KAG7025230.1	5.5e-125	88.24	hypothetical protein SDJN02_11725 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh08G000230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23255.2	4.0e-65	53.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23255.1	1.3e-63	53.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 46..229 e-value: 8.6E-7 score: 30.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 50..217
None	No IPR available	PANTHER	PTHR28653	FAMILY NOT NAMED	coord: 29..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G000230.1	CmoCh08G000230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation