CmoCh07G013150 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G013150
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr07: 7369815 .. 7371744 (+)
RNA-Seq ExpressionCmoCh07G013150
SyntenyCmoCh07G013150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGGTTGTCTTAGCAGAGAGATTGACCAGCACAGATCCGTCAATCCCTCATTCTTCGTGTTCGATTCCTTTGACGGATGAAGAATCACCCGAGTGATCAGCTGAAGATTGAGAGAAGAAAGGGGAATTTTGGTTTTAGGAAGAACAACCAACAAGAACTTGCTAACTCGGACTCGAATCGCGTGTTGGGGACTAAGATGAGAGAGTTAGTTTTTTTTTATTGTTTTTTATTGTTTTTTATTGTTTTTTTTTTTCCCTAAAAAGTATATGAAATGTCAATTTTAATTTTTAAAAACTATATTAATAAAAATACCTTTAAAAATAATATCCTTTTAGAAGTATTTAAAAATATATCATTAAAACTAAAAAAGAAAAATTAAAAATACTCCCATCTTAATTTTGGAGAAACTATTCCTACGGTGTTTCAAAAAAAAATTTCGAAGTTTCAAGAGTAACATTAAAAAGTTTGAAGATAATTTATAAGATGTCGATATACGATTTTTATCCGTATATTAATGATAAATATTCTTTTTTAACTTTTTTTTGCTCCATCTACCGGGACAGAAAACCCATCGCTGTCTCGGTTGTGCTACCGGAGGCTCTGGGGAAGTCTGAATAGGAGAGCACTCATCTTGGGGTGGGCTAACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGCCCTTTCTGATCCTCTCGTACTAGGGAAAAGTCCTCTCAATGCTCTAACGCCCACACCAGATATGGATTTAAGAGGCGTTTTTAAAATGTTTAAAAGTATTTTTGAAACACTATTAAAAGTTTAAAGATATTTTTGAAATAAAATAATAACCGTTTAAGATCCAAAACTAATGGTAAAATTATTTGAAAGTTTATACAATATCTGTTAGCGGTGAGCTTAGACTATTACGTAGTTTACAACAAGAATACATGAGAATAATGAAACAATCCAAAGATCTTAGAACTTAAATATTTTAACAAAGTTGAACACAAATAGTTCGAGAAGATTCTCTCCGATGAAAAATGACATCATTTTACATTTGATTATACATTAGTTTTCGGTTTTTATATTCGAGGAATTTTGATTTCAAAAGTCAAGCTCGATTCAAAATTTTTTATAGAAGAACATGAAACCTATTAAGGAAATTGTAAAAAAATAAAATAAAAAAATAATAATTAAAAAAACTTTAATTTAAAAAAAAAATGAGGAAATTGAATAAATTAGCATAAAAAAATGGATGTTAATAAATATTTGTTGTTTAAAAATATTTTGTATTTAAAAAATAAATAAACAAAAAAACCAGCTAGAGCGTGGAAATAAAATATAAAAAAAGGTATTTTTAATGTGGAGAAGCAAGAAAATGAGAAGAAAAAAACATGTTCTTTCCTAGAATAATGGAGGAACATACAGTTGTTTGGCTGCCAAGAAACTCATGGAAAGCTTTGAAGCTGAAGGTCTTAGCCTCTGGATTCAGGTCAAACGACAACCAACCAAAAAGGTAAACAAAATATAGACAAATTTCTGTTTTGCGACAAATTTGGAAGTTCTCAGATCATTGATTTGTGTTCCTAATATCAAACTTGGGGTGGGTTGAAGAAGAACAAGAACAAAATGCTTTTGGGGTTATGATTTCTAGGAAAAGGGGTTTAAGTTCTTTAGTGTTCATCTTATGAAGCTCTGCCCTGAGGTCGTGGCTATGGAGTTTGGACCAGGCGAAGACACCCATGAAATGATACCATCGCTTCCCCTGTGCTCTGAAATGATATCATCGCCTTATGAATATGTATCAAACTGTTGTGGTAAAACAATGGCGATTCCTTTTGGTTCTCCTCAAATCATGTCTTGTTCATTAAGCCAAACCCACCTAGTTTCTTAG

mRNA sequence

ATGATTGGTTGTCTTAGCAGAGAGATTGACCAGCACAGATCCGTCAATCCCTCATTCTTCGTTTGTTTGGCTGCCAAGAAACTCATGGAAAGCTTTGAAGCTGAAGGTCTTAGCCTCTGGATTCAGGTCAAACGACAACCAACCAAAAAGGAAAAGGGGTTTAAGTTCTTTAGTGTTCATCTTATGAAGCTCTGCCCTGAGGTCGTGGCTATGGAGTTTGGACCAGGCGAAGACACCCATGAAATGATACCATCGCTTCCCCTGTGCTCTGAAATGATATCATCGCCTTATGAATATGTATCAAACTGTTGTGGTAAAACAATGGCGATTCCTTTTGGTTCTCCTCAAATCATGTCTTGTTCATTAAGCCAAACCCACCTAGTTTCTTAG

Coding sequence (CDS)

ATGATTGGTTGTCTTAGCAGAGAGATTGACCAGCACAGATCCGTCAATCCCTCATTCTTCGTTTGTTTGGCTGCCAAGAAACTCATGGAAAGCTTTGAAGCTGAAGGTCTTAGCCTCTGGATTCAGGTCAAACGACAACCAACCAAAAAGGAAAAGGGGTTTAAGTTCTTTAGTGTTCATCTTATGAAGCTCTGCCCTGAGGTCGTGGCTATGGAGTTTGGACCAGGCGAAGACACCCATGAAATGATACCATCGCTTCCCCTGTGCTCTGAAATGATATCATCGCCTTATGAATATGTATCAAACTGTTGTGGTAAAACAATGGCGATTCCTTTTGGTTCTCCTCAAATCATGTCTTGTTCATTAAGCCAAACCCACCTAGTTTCTTAG

Protein sequence

MIGCLSREIDQHRSVNPSFFVCLAAKKLMESFEAEGLSLWIQVKRQPTKKEKGFKFFSVHLMKLCPEVVAMEFGPGEDTHEMIPSLPLCSEMISSPYEYVSNCCGKTMAIPFGSPQIMSCSLSQTHLVS
Homology
[Close]
BLAST of CmoCh07G013150 vs. NCBI nr
Match: KAG6595611.1 (hypothetical protein SDJN03_12164, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 29  MESFEAEGLSLWIQVKRQPTKKEKGFKFFSVHLMKLCPEVVAMEFGPGEDTHEMIPSLPL 88
           MESFEAEGLSLWIQVKRQPTKKEKGFKFFSVHLMKLCPEVVAMEFGPGEDTHEMIPSLPL
Sbjct: 1   MESFEAEGLSLWIQVKRQPTKKEKGFKFFSVHLMKLCPEVVAMEFGPGEDTHEMIPSLPL 60

Query: 89  CSEMISSPYEYVSNCCGKTMAIPFGSPQIMSCSLSQTHLVS 130
           CSEMISSPYEYVSNCCGKTMAIPFGSPQIMSCSLSQTHLVS
Sbjct: 61  CSEMISSPYEYVSNCCGKTMAIPFGSPQIMSCSLSQTHLVS 101

The following BLAST results are available for this feature:
BLAST of CmoCh07G013150 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G013150 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G013150 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595611.12.6e-51100.00hypothetical protein SDJN03_12164, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmoCh07G013150 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G013150.1CmoCh07G013150.1mRNA