CmoCh07G012760 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G012760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	YLP motif-containing protein 1-like
Location	Cmo_Chr07: 7009218 .. 7009718 (+)
RNA-Seq Expression	CmoCh07G012760
Synteny	CmoCh07G012760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGCGAAACCTCCGATAATCTCCACCAATCGCTTCAGATCAAGCACAACGACAAATTCTTCTCCAAGCTTCTAACCAGAGAAAGTTCCAGAGCCGATTACTCTTCCAGAGTCTACTATGCCGGATTGGCCGGCGCTGTTCCCTTCGGTTGGGAGTCTCAGCCAGGTACGCCTATTCACCGATTTTCCGATGACCTAACTCCTCCTCTCACTCCTCCTCCTTCTTACTTTTCCGATTCTCTTAAGAAACCGCCGAAGAAGCGATCCAAATCGCTCTCGCTTTTCCACATCTTCTTTAATCCGAAGAGGAAAATCGACGATCTGTTGTCGCCGCCATTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGACTCGGCCGCCGGACGCCGTTTTCCGCGACGGTTACCGAGCGGAATCTCGCATTCGAAGGAGAAAGCGGCGGCGGCGGCGCCCACCGGTTCGGTACTTTGTTTCGGCATCGGCAGATAA

mRNA sequence

ATGCTCTGCGAAACCTCCGATAATCTCCACCAATCGCTTCAGATCAAGCACAACGACAAATTCTTCTCCAAGCTTCTAACCAGAGAAAGTTCCAGAGCCGATTACTCTTCCAGAGTCTACTATGCCGGATTGGCCGGCGCTGTTCCCTTCGGTTGGGAGTCTCAGCCAGGTACGCCTATTCACCGATTTTCCGATGACCTAACTCCTCCTCTCACTCCTCCTCCTTCTTACTTTTCCGATTCTCTTAAGAAACCGCCGAAGAAGCGATCCAAATCGCTCTCGCTTTTCCACATCTTCTTTAATCCGAAGAGGAAAATCGACGATCTGTTGTCGCCGCCATTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGACTCGGCCGCCGGACGCCGTTTTCCGCGACGGTTACCGAGCGGAATCTCGCATTCGAAGGAGAAAGCGGCGGCGGCGGCGCCCACCGGTTCGGTACTTTGTTTCGGCATCGGCAGATAA

Coding sequence (CDS)

ATGCTCTGCGAAACCTCCGATAATCTCCACCAATCGCTTCAGATCAAGCACAACGACAAATTCTTCTCCAAGCTTCTAACCAGAGAAAGTTCCAGAGCCGATTACTCTTCCAGAGTCTACTATGCCGGATTGGCCGGCGCTGTTCCCTTCGGTTGGGAGTCTCAGCCAGGTACGCCTATTCACCGATTTTCCGATGACCTAACTCCTCCTCTCACTCCTCCTCCTTCTTACTTTTCCGATTCTCTTAAGAAACCGCCGAAGAAGCGATCCAAATCGCTCTCGCTTTTCCACATCTTCTTTAATCCGAAGAGGAAAATCGACGATCTGTTGTCGCCGCCATTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGACTCGGCCGCCGGACGCCGTTTTCCGCGACGGTTACCGAGCGGAATCTCGCATTCGAAGGAGAAAGCGGCGGCGGCGGCGCCCACCGGTTCGGTACTTTGTTTCGGCATCGGCAGATAA

Protein sequence

MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPIHRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASLPSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR

Homology

[Close]

BLAST of CmoCh07G012760 vs. ExPASy TrEMBL
Match: A0A6J1EB06 (uncharacterized protein LOC111432413 OS=Cucurbita moschata OX=3662 GN=LOC111432413 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.8e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI
Sbjct: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120

Query: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 167
           PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR
Sbjct: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 166

[Close]

BLAST of CmoCh07G012760 vs. ExPASy TrEMBL
Match: A0A1S3CL26 (uncharacterized protein LOC103502186 OS=Cucumis melo OX=3656 GN=LOC103502186 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.6e-59
Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           M+CETSD   +SLQ K NDKFFSK+L+RESSRA+YSSR+YY GLAGAVPF WESQPGTPI
Sbjct: 1   MVCETSDYPQKSLQFKQNDKFFSKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFSDSLKKP KKRSKSLSL HIFFN KRK D L  PP SKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPLKKRSKSLSLLHIFFNSKRKFDLLSPPPVSKSASL 120

Query: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 167
           PS GS+FDSAAG +F  R  +    ++++   AA +GSVLCFG+GR
Sbjct: 121 PSPGSVFDSAAGAKFTGRRSARRFPTEKEEENAAASGSVLCFGLGR 166

[Close]

BLAST of CmoCh07G012760 vs. ExPASy TrEMBL
Match: A0A0A0L1H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329820 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56
Identity = 119/166 (71.69%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           M+CETS+   +SLQ K NDKF SK+L+RESSRA+YSSR+YY GLAGAVPF WESQPGTPI
Sbjct: 1   MVCETSEYPQKSLQFKQNDKFISKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFSDSLKKP KKRSKSLSL HIFF+ KRK D L  PP SKS SL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPLKKRSKSLSLLHIFFSSKRKFDLLSPPPVSKSPSL 120

Query: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 167
            SSGS+FDSAAG +F  R  +    ++++   AA T SVLCFGIGR
Sbjct: 121 SSSGSVFDSAAGAKFTGRRSARRFPTEKEEENAAATSSVLCFGIGR 166

[Close]

BLAST of CmoCh07G012760 vs. ExPASy TrEMBL
Match: A0A6J1IKR7 (uncharacterized protein LOC111478334 OS=Cucurbita maxima OX=3661 GN=LOC111478334 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 111/132 (84.09%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           MLCETSD   +SLQ KHNDKFFSKLLTRESSRA++SSR+YY GLAGAVPF WESQPGTP+
Sbjct: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFS SL+KPPK RSKSLSLFHIFFN KRK+ DLL+PP SKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKL-DLLTPPVSKSASL 120

Query: 121 PSSGSMFDSAAG 133
           PSSGS FDSA G
Sbjct: 121 PSSGSTFDSAVG 131

[Close]

BLAST of CmoCh07G012760 vs. ExPASy TrEMBL
Match: A0A6J1CSP7 (uncharacterized protein LOC111013865 OS=Momordica charantia OX=3673 GN=LOC111013865 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.6e-46
Identity = 102/132 (77.27%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 5   TSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSR-VYYAGLAGAVPFGWESQPGTPIHRF 64
           +SD   +SLQIK NDKFFSKLL+RESSRA+ SSR VYY G AGAVPF WESQPGTP HRF
Sbjct: 2   SSDYPQKSLQIKQNDKFFSKLLSRESSRANSSSRSVYYGGFAGAVPFDWESQPGTPKHRF 61

Query: 65  SDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASLPSS 124
           SD LTPPLTPPPS+FSDS KKPPK RSKSL+LFHIFFNPKRK  DLL+PPFS+SA+LPSS
Sbjct: 62  SDHLTPPLTPPPSFFSDSAKKPPKNRSKSLNLFHIFFNPKRKF-DLLAPPFSRSATLPSS 121

Query: 125 GSMFDSAAGRRF 136
           GS  DS A  +F
Sbjct: 122 GSAIDSPARVKF 132

[Close]

BLAST of CmoCh07G012760 vs. NCBI nr
Match: XP_022925049.1 (uncharacterized protein LOC111432413 [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 9.9e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI
Sbjct: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120

Query: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 167
           PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR
Sbjct: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 166

[Close]

BLAST of CmoCh07G012760 vs. NCBI nr
Match: KAG7027544.1 (hypothetical protein SDJN02_11558, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.6 bits (823), Expect = 3.9e-84
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           MLCETSDNLHQSLQIK+NDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI
Sbjct: 1   MLCETSDNLHQSLQIKNNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120

Query: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 167
           PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAA  TGSVLCFGIGR
Sbjct: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAA--TGSVLCFGIGR 164

[Close]

BLAST of CmoCh07G012760 vs. NCBI nr
Match: KAG6595563.1 (hypothetical protein SDJN03_12116, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           MLCETSDN HQSLQIK+NDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI
Sbjct: 1   MLCETSDNFHQSLQIKNNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120

Query: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 167
           PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAA  TGSVLCFGIGR
Sbjct: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEKAAAA--TGSVLCFGIGR 164

[Close]

BLAST of CmoCh07G012760 vs. NCBI nr
Match: XP_023518308.1 (uncharacterized protein LOC111781828 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 4.8e-82
Identity = 160/171 (93.57%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI
Sbjct: 39  MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 98

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFSDS+KKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFS SASL
Sbjct: 99  HRFSDDLTPPLTPPPSYFSDSVKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSNSASL 158

Query: 121 PSSGSMFDSAAGRRFPRRLPSGISHSKEK-----AAAAAPTGSVLCFGIGR 167
           PSSGSMFDS+AGRR  RRLPSGISHSKEK     AAAAA TGSVLCFGIGR
Sbjct: 159 PSSGSMFDSSAGRRLARRLPSGISHSKEKAAAAAAAAAAATGSVLCFGIGR 209

[Close]

BLAST of CmoCh07G012760 vs. NCBI nr
Match: KAG6603545.1 (hypothetical protein SDJN03_04154, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033731.1 hypothetical protein SDJN02_03456, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.1 bits (640), Expect = 6.5e-63
Identity = 135/171 (78.95%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60
           MLCETSD   +SLQ KHNDKFFSKLLTRESSRA++SSR+YY GLAGAVPF WESQPGTP+
Sbjct: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60

Query: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120
           HRFSDDLTPPLTPPPSYFS SL+KPPK RSKSLSLFHIFFN KRK+ DLL+PP SKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKL-DLLTPPVSKSASL 120

Query: 121 PSSGSMFDSA-----AGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 167
           PSSGSMFDSA     AGRR  RR   G+S SKE   AAA +GSVLCFGIGR
Sbjct: 121 PSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAA-SGSVLCFGIGR 169

[Close]

BLAST of CmoCh07G012760 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-13
Identity = 52/134 (38.81%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 18  NDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPIHR-FSDDL-TPPLTPPP 77
           N    SK++ +ESS+ + SSR+YY G   +VPF WE++PGTP H  FS+ L  PPLTPPP
Sbjct: 10  NGVISSKIIVKESSQVNSSSRIYYYG-GASVPFLWETRPGTPKHALFSESLRLPPLTPPP 69

Query: 78  SYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASLPSSGSMFDSAAGRRF 137
           SY+S S      K SK+ ++    F        +  P FS S++  SS S + S++    
Sbjct: 70  SYYSSS-SSSGNKLSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSYSSSSP--- 129

Query: 138 PRRLPSGISHSKEK 150
               PS + H   K
Sbjct: 130 ----PSKVEHRPRK 134

[Close]

BLAST of CmoCh07G012760 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 54/141 (38.30%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 40  YYAGLAGAVPFGWESQPGTPIHRFSDDLT-PPLTPPPSYFS---DSLKKPPKKRSKSL-- 99
           YY G AGAVPF WES PGTP H  S+  T PPLTPPPS+FS   D +++  KK +K +  
Sbjct: 67  YYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRRSKKSTKKILA 126

Query: 100 ----SLFHIF--FNPKRKIDDLLSPPFSKSASL--PSSGSMFDSAAGRRFPRRLPSGISH 159
                LF +    N K K     SPP      L   +   +F     R   RR  S  S 
Sbjct: 127 LIPTRLFWLSGDHNGKAKKLSASSPPSLSERVLIDENEYDLFKFQTERNVMRRFSSFDSS 186

Query: 160 SKEKAAAAAPTGSVLCFGIGR 167
           +      +  T    CFGI R
Sbjct: 187 ADYPIQRSQSTS---CFGIRR 204

[Close]

BLAST of CmoCh07G012760 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 56.6 bits (135), Expect = 2.2e-08
Identity = 48/144 (33.33%), Postives = 68/144 (47.22%), Query Frame = 0


Query: 40  YYAGLAGAVPFGWESQPGTP-IHRFSDDLTP-PLTPPPSYFSDSLKKPPKKRSK------ 99
           YY G   ++PF WES+PGTP  H  SD   P PLTPPPSY+S  +   P+ +SK      
Sbjct: 18  YYGG--ASIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

Query: 100 ---SLSLFHIFFNPKRKIDDLLSPPFSKSASLPSSGSMFDSAAGRRFPRRL------PSG 159
              S S+F              S  FS S++  SS S F S+      +R+      P  
Sbjct: 78  KFLSFSMFSDLRRSNHGSKKTASSSFSWSST--SSSSSFSSSPPHSLKKRMSHDKKSPLL 137

Query: 160 ISHSKEKAAAAAPTGSVLCFGIGR 167
            ++ +E    ++PT ++ C   GR
Sbjct: 138 YANYEEDELRSSPTSTLCCSNGGR 157

[Close]

BLAST of CmoCh07G012760 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 4.1e-07
Identity = 44/124 (35.48%), Postives = 56/124 (45.16%), Query Frame = 0


Query: 40  YYAGLAGAVPFGWESQPGTPIH--------------RFSDDLTPPLTPPPSYF----SDS 99
           YY G + AVPF WESQPGTP                 F+  ++ PLTPPPSYF    S +
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 100 LKKPPKKRSKSLSLFHIFFNPKRKI-DDLLSPPFSKSASLPSSGSMFDSAAGRRFPRRLP 145
               PKK +   +LF    +  R +     S   S S+S+PSS       + RR      
Sbjct: 84  KHVSPKKTN---TLFSSLLSKNRSVPSSPASSSSSSSSSVPSSPLRTSDLSNRRRSMWFE 143

[Close]

BLAST of CmoCh07G012760 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 3.5e-06
Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 26 LTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPIHRFSDDLTPPLTPPPSYFSDSLKKP 85
          ++R SS   Y  R     +   VPF WE QPGTPI+    ++ PPL+PPP+  S  L KP
Sbjct: 12 ISRNSSVGYYDER-----MPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 66

The following BLAST results are available for this feature:

BLAST of CmoCh07G012760 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh07G012760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EB06	4.8e-88	100.00	uncharacterized protein LOC111432413 OS=Cucurbita moschata OX=3662 GN=LOC1114324...	[more]
A0A1S3CL26	3.6e-59	73.49	uncharacterized protein LOC103502186 OS=Cucumis melo OX=3656 GN=LOC103502186 PE=...	[more]
A0A0A0L1H9	1.7e-56	71.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329820 PE=4 SV=1	[more]
A0A6J1IKR7	1.3e-53	84.09	uncharacterized protein LOC111478334 OS=Cucurbita maxima OX=3661 GN=LOC111478334...	[more]
A0A6J1CSP7	4.6e-46	77.27	uncharacterized protein LOC111013865 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of CmoCh07G012760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925049.1	9.9e-88	100.00	uncharacterized protein LOC111432413 [Cucurbita moschata]	[more]
KAG7027544.1	3.9e-84	98.19	hypothetical protein SDJN02_11558, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6595563.1	1.1e-83	97.59	hypothetical protein SDJN03_12116, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023518308.1	4.8e-82	93.57	uncharacterized protein LOC111781828 [Cucurbita pepo subsp. pepo]	[more]
KAG6603545.1	6.5e-63	78.95	hypothetical protein SDJN03_04154, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh07G012760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40475.1	5.0e-13	38.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01790.1	2.0e-09	38.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G56260.2	2.2e-08	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06930.1	4.1e-07	35.48	unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ...	[more]
AT4G25845.1	3.5e-06	43.33	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..89
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 4..163
None	No IPR available	PANTHER	PTHR33257:SF24	EXPRESSED PROTEIN	coord: 4..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G012760.1	CmoCh07G012760.1	mRNA