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CmoCh07G012340 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCTTCCAACTACTTCATCATACCTTTCATGGCTACTTTAGTGTTTTCGGCCATCGACACTGGCCGAGCAGCTCGTCATCTCCTGCAAATCGCTTCACCGAGCGTGCCAGGGTTGCCCTCATTGCCTCCTCTCCCGTCGTTGCCAAACCCGACAACAGGGTCAGGAATCCCTTCTATCCCAAGCCTCCCACAACCAACGTTGCCAACTACTCAACCATCCCTCCCTAAGTTACCACCATTTCCAACCTTCCCTAGCAACATCCCGACTGGAATGGCGCTGCCTCCGCTCCCGACAACTTTGCTTCCAAACCTACCCTCGATCCCTTCCCTCACTCCACCGCCGACCACCACCTCTTCACCTTGA ATGGCCTCTTCCAACTACTTCATCATACCTTTCATGGCTACTTTAGTGTTTTCGGCCATCGACACTGGCCGAGCAGCTCGTCATCTCCTGCAAATCGCTTCACCGAGCGTGCCAGGGTTGCCCTCATTGCCTCCTCTCCCGTCGTTGCCAAACCCGACAACAGGGTCAGGAATCCCTTCTATCCCAAGCCTCCCACAACCAACGTTGCCAACTACTCAACCATCCCTCCCTAAGTTACCACCATTTCCAACCTTCCCTAGCAACATCCCGACTGGAATGGCGCTGCCTCCGCTCCCGACAACTTTGCTTCCAAACCTACCCTCGATCCCTTCCCTCACTCCACCGCCGACCACCACCTCTTCACCTTGA ATGGCCTCTTCCAACTACTTCATCATACCTTTCATGGCTACTTTAGTGTTTTCGGCCATCGACACTGGCCGAGCAGCTCGTCATCTCCTGCAAATCGCTTCACCGAGCGTGCCAGGGTTGCCCTCATTGCCTCCTCTCCCGTCGTTGCCAAACCCGACAACAGGGTCAGGAATCCCTTCTATCCCAAGCCTCCCACAACCAACGTTGCCAACTACTCAACCATCCCTCCCTAAGTTACCACCATTTCCAACCTTCCCTAGCAACATCCCGACTGGAATGGCGCTGCCTCCGCTCCCGACAACTTTGCTTCCAAACCTACCCTCGATCCCTTCCCTCACTCCACCGCCGACCACCACCTCTTCACCTTGA MASSNYFIIPFMATLVFSAIDTGRAARHLLQIASPSVPGLPSLPPLPSLPNPTTGSGIPSIPSLPQPTLPTTQPSLPKLPPFPTFPSNIPTGMALPPLPTTLLPNLPSIPSLTPPPTTTSSP Homology
BLAST of CmoCh07G012340 vs. ExPASy TrEMBL
Match: A0A6J1J782 (uncharacterized protein LOC111483197 OS=Cucurbita maxima OX=3661 GN=LOC111483197 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.7e-35 Identity = 92/124 (74.19%), Postives = 99/124 (79.84%), Query Frame = 0
BLAST of CmoCh07G012340 vs. ExPASy TrEMBL
Match: A0A6J1E948 (uncharacterized protein LOC111430528 OS=Cucurbita moschata OX=3662 GN=LOC111430528 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 86/116 (74.14%), Postives = 93/116 (80.17%), Query Frame = 0
BLAST of CmoCh07G012340 vs. ExPASy TrEMBL
Match: A0A0A0KWI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182290 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.9e-26 Identity = 83/129 (64.34%), Postives = 94/129 (72.87%), Query Frame = 0
BLAST of CmoCh07G012340 vs. ExPASy TrEMBL
Match: A0A5A7TLS8 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00030 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.0e-26 Identity = 88/133 (66.17%), Postives = 96/133 (72.18%), Query Frame = 0
BLAST of CmoCh07G012340 vs. ExPASy TrEMBL
Match: A0A5D3E045 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00030 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24 Identity = 86/134 (64.18%), Postives = 92/134 (68.66%), Query Frame = 0
BLAST of CmoCh07G012340 vs. NCBI nr
Match: KAG7027509.1 (hypothetical protein SDJN02_11523, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 0
BLAST of CmoCh07G012340 vs. NCBI nr
Match: KAG6595525.1 (hypothetical protein SDJN03_12078, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 0
BLAST of CmoCh07G012340 vs. NCBI nr
Match: XP_023518060.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47 Identity = 111/125 (88.80%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of CmoCh07G012340 vs. NCBI nr
Match: XP_023518061.1 (protein PELPK1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.4 bits (472), Expect = 1.4e-43 Identity = 107/128 (83.59%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of CmoCh07G012340 vs. NCBI nr
Match: KAG6595524.1 (hypothetical protein SDJN03_12077, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39 Identity = 101/125 (80.80%), Postives = 108/125 (86.40%), Query Frame = 0
BLAST of CmoCh07G012340 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.7e-05 Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of CmoCh07G012340 vs. TAIR 10
Match: AT4G38080.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 44.7 bits (104), Expect = 6.3e-05 Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of CmoCh07G012340 vs. TAIR 10
Match: AT2G22510.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 44.3 bits (103), Expect = 8.3e-05 Identity = 44/127 (34.65%), Postives = 61/127 (48.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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