CmoCh07G011950 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G011950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent DNA helicase
Location	Cmo_Chr07: 6480714 .. 6484792 (-)
RNA-Seq Expression	CmoCh07G011950
Synteny	CmoCh07G011950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATCATTTCTGTTATCTTTGTGGCGCCCTTGAACGGAAAGAGCAGAAAGCTGCCCACTCGTATTCTTCTAACTCGACCACCGGAAAAGAGAGCAGCAGAGACAAAAAATGGAGGCTATTCTAAAGGTAAAAATGTTTTTTCTTCTTCTTCTTTTGATTCTGGTTATGGGGTTATGCTTGTTTCGATTACCGCGGTTTGTTTTTTTGGACTTGTTCTTCTTTGTTGTTGATTAATAGTGAACAATAAGGACATCATTTGTAAAAGAAATTTGTGGGTATTGCATTTGTTGTGGTTTGATCGCTGTTATCTGTACTGTTGCAGAGTTCATTTGGTTTCTCGGCGTTCAGGCCGTATCAGAAAGAAGTCATTCAGGACATTCTTCAAGGGAAGGATTGCTTGGTGGTCATGGCTACTGGAAGTGGCAAGTCCTTATGGTATCTGTAGTTGTCTCTTCTACCATTTGGGTTTGCTTGTTCTTGTTTATTAGCTATTTATTTATTGTATGTTTACTTGTCAAAGTTATCAGGTACCGCCTTTGGTTGTTGGAAAGACTGGCATAGTTGTTAGCCCTCTTATATCACTAATGCAAGATCAGGTAATTGATTGTTGTCATTATCACTGTTTGGCTTTTCACGAGTGTAACGGCCCAAGCCCCACCGCTAGTAGATATGGTCCTCTTTGAGCTTTTCTTTTCGGGTTTCCCCTCACGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGGGTGCTTTGTTCTCCTCCCCAACCGATGTGGGATCTCACAATTCACCCCCTCCGGGGTCCAGCGTCCTAGCTGGCACTTGTTCCCTACTCCAATCGATGTGGGATCTCACCATGAGAATAGTGAAGTGAAGGTTTACACAAACTGATCTGAACACTCACGGGCGTTAAAAAAACATTTTTCTGTTTCTCTTTTTTGCTATTGGGTTTTGGACCTCATTCTTCTTGCCTAACCCATTTTAGAATATGGATTTTGTAGGTAATGGCTTTAAAACAAAGAGGCATCATGTCTGAGTACCTTGGCAGTACTCAGACTGATTCCACTGTTCAAGCCAAGGCGGAGAATGGTCAATATAATATTTTGTTCATGACACCAGAGAAGGCATGCTCTGTTCCTATCAGGTAAGAATTCCTGGAGCAATTCTAAGTCCAATTCTAGGCATTCCTCTTTCTATCTCTGCCTCTTTCTGAGTTTTCATGGCATTTGTATTGTTGTCATTCAATCCCATGTCTGTTTCATTCTCACTTCTTCTCTCTCTCTGTCTTGCTTGATCATGAGTTTTATTTGTTGTGATTTTCTGTATATAGACAGAAGTAATTCTTAAATTCTAGTGAAAAATCACTGTGGATATTATAGTTGTAGAGTGAAACTATTGTCCTTGAGCATCCTGGGAAGGAAAAACGTTTATACGATTGAATCCTTGAAAGGAGGACTAGGTATTACTAGCTGTACAATATGCGGTAACAGATTTGAGTACTTCTGTCGTATTCAGGAATTGGATGTGAGATCCCACATTAGTTGGGGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATTTGCTAGCGATGGACTTGGGTTGTTACAAAGGGTATCAGGGCTAGACACCGAGCGATGTGTCAGTGAGGAGGTGGAGCCCCGAAGGGGGGTGGACACTAGGCGGTGTGCCAACAAAGATGCTGGGCTTCGAGGGGGAGGGGGGGGGGGGGGATTGGGGAATCCCACATTGATTGGAGAAGGGAACAAGTGCCAGTGAGGACGTTGACCCTGAAGAGGGATAGATTGTGAAATCCCACGTCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCTCCCTAACAGACACGTTTTAAAACCTTGAGGGGAAGCCCGGAAGAGAAAGCCCAAAGAAAACAATATCTACTACCGGTGGACTTGGACTCTTACATACTCTTAGTCTACGAGAAAAGAAAAAAGAACAAAAAAAAAACCGAGTAGACTAATAAATGGTTCCCACCTCTCCCAATGTTTCCCAAAAGACCGTTCAAAGAAAACGAGAGACCTGACCAACAATTTGGTATTTAAACAGATCCAATCCTGCTTTTTTGTTAAACAGTGATTGACTTTTAGCTAATGGACTAAAAATGTTGCCTAAGAATGAGAAGTTTGTCACATGTCTATAGCAGGAAGGAGGAGACATGGACAAAGTATGCTAGGACAAATGACAAAGTATGATAGAATTACCTCTCTGTCTCTTTCTACTAGTTTTTGCCAGCCTTGTTGGATTTTCTGCTTTTCGACCATGGAAGCACAGTGATGGATGGCCTTTATAAGTTTTGTTCTTGTATCGTTTCTATATTGACATTTTCCGTGGGGACCGAGACTTCCCACATGCAACCTGTCGTTGCGAGTCATCCTCCAGTCACTATAGTTGCTAANGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGATTGGGGAGTCCAACATCGATTGGAGAAGGGAACGAGTGCCAGCAAGGACGCTAGGTCCTGAAGGGGGTGGATTGTGAGATCCCACGTCGATTGGGGAGGAGAACGAAACACCTTTTATAAGGGTGTGGAAACCTCTCCCTAACAGACACGTTTTAAAAGCCTTGAGGGTAAGCCCGAAGAGGACAATATCGGCTAGTAGTGAGCTTGGGTTATTACACGATGTGTGGGATGGATATACAATGTTGAATACTTATGATGTAATTCTGATGGAATTACATTTTACTCGGTGGCAAAGATGGTTCAAATGGAGAGTTGTGATTCATGACATTCTACTCTTCTATCGTGATTAACACTCCTACTGATTTACTTTGAACTTCATTTTTACAGCTTTTGGTCAAAATTACAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCAGAGTGGGGGCATGATTTCAGGTTCATCTTTGATCTTATCCATTTTCCTCTCATTTCAACTCGACTCCAATGGACCTTATCCTGACATACTTGGCCTATTGATTTAGATGTTTAGTTTTCTAACGTCGAAGGTCTCTAGGAAACGGATTATAGTGCCTTATTTAGCCAAGTTGTTAGCATTGAGATGAAAAAACATATTGTTGTTTAGTGTTTCTTCATGTTGTTCGTGGAGTTTTCCTCTCTCCTTTTTAGTACTTCTCTTAATTGTTCTGTGAATTATCGGGTCGGTACTGGTTCACAGGGTAGAATACAAACGATTGGACAAACTACGAGACGTTCTACCAGGCCTTCCATTTGTTGCCTTGACTGCCACTGCTACTGCAAAGTCGGTAGAACGTGATATCTTGCGTCGTTATTCTTTTTTAACTTTAATGTTTATGCTTTTACCTTAAACTATTTCAATAAGCTTTCTTGGGGAAATTAATTTTTCGGTTTTTATTTCACATACTGTTCCAGGGTTCGGAGTGACATCATTAGTTCTTTGAAGATGAAAGATCCACAAGTTACCATTGGTTCATTTGATCGGACTAACCTTTTTTATGGAGTGAAGTCTTTTAATCGTGGTCCATTATTCTTGAACGAGCTCGTGCTCGATATATCTAAATATCTGGCCTCTGGTGGTTCAACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGGTATTTTCTTTTGCCTCTTACAAACATGGACAGATAAATCTTTTGCATACTCACCTAGTATTCCAGAGAATCAAGCAATAGGATTGTTTCATTATTGTTAATACTTTGTTAGATTTTTGTTAAAGATGCACGTTCAGGTTTATGTCGTCGAACTTATAGATTAGCTGTTTGTGAACTTCAATCGACATTTTCGTAGATATTCAAGGCACTTGAAGAAGCAGGGATTTGTGCTGGTATCTATCACGGTCAAATGGACAAAAAAGCACGTGCCGAATCCCACAGGTTATACCACTATTTTGAGGCTCTTATGGAGATGTGCCCTCTCTAA

mRNA sequence

AGAATCATTTCTGTTATCTTTGTGGCGCCCTTGAACGGAAAGAGCAGAAAGCTGCCCACTCGTATTCTTCTAACTCGACCACCGGAAAAGAGAGCAGCAGAGACAAAAAATGGAGGCTATTCTAAAGGCCGTATCAGAAAGAAGTCATTCAGGACATTCTTCAAGGGAAGGATTGCTTGGTGGTCATGGCTACTGGAAGTGGCAAGTCCTTATGGTACCGCCTTTGGTTGTTGGAAAGACTGGCATAGTAATGGCTTTAAAACAAAGAGGCATCATGTCTGAGTACCTTGGCAGTACTCAGACTGATTCCACTGTTCAAGCCAAGGCGGAGAATGGTCAATATAATATTTTGTTCATGACACCAGAGAAGGCATGCTCTGTTCCTATCAGCTTTTGGTCAAAATTACAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCAGAGTGGGGGCATGATTTCAGGGTAGAATACAAACGATTGGACAAACTACGAGACGTTCTACCAGGCCTTCCATTTGTTGCCTTGACTGCCACTGCTACTGCAAAGGTTCGGAGTGACATCATTAGTTCTTTGAAGATGAAAGATCCACAAGTTACCATTGGTTCATTTGATCGGACTAACCTTTTTTATGGAGTGAAGTCTTTTAATCGTGGTCCATTATTCTTGAACGAGCTCGTGCTCGATATATCTAAATATCTGGCCTCTGGTGGTTCAACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGATTTTTGTTAAAGATGCACGTTCAGGTTTATGTCGTCGAACTTATAGATTAGCTATATTCAAGGCACTTGAAGAAGCAGGGATTTGTGCTGGTATCTATCACGGTCAAATGGACAAAAAAGCACGTGCCGAATCCCACAGGTTATACCACTATTTTGAGGCTCTTATGGAGATGTGCCCTCTCTAA

Coding sequence (CDS)

ATGGAGGCTATTCTAAAGGCCGTATCAGAAAGAAGTCATTCAGGACATTCTTCAAGGGAAGGATTGCTTGGTGGTCATGGCTACTGGAAGTGGCAAGTCCTTATGGTACCGCCTTTGGTTGTTGGAAAGACTGGCATAGTAATGGCTTTAAAACAAAGAGGCATCATGTCTGAGTACCTTGGCAGTACTCAGACTGATTCCACTGTTCAAGCCAAGGCGGAGAATGGTCAATATAATATTTTGTTCATGACACCAGAGAAGGCATGCTCTGTTCCTATCAGCTTTTGGTCAAAATTACAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCAGAGTGGGGGCATGATTTCAGGGTAGAATACAAACGATTGGACAAACTACGAGACGTTCTACCAGGCCTTCCATTTGTTGCCTTGACTGCCACTGCTACTGCAAAGGTTCGGAGTGACATCATTAGTTCTTTGAAGATGAAAGATCCACAAGTTACCATTGGTTCATTTGATCGGACTAACCTTTTTTATGGAGTGAAGTCTTTTAATCGTGGTCCATTATTCTTGAACGAGCTCGTGCTCGATATATCTAAATATCTGGCCTCTGGTGGTTCAACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGATTTTTGTTAAAGATGCACGTTCAGGTTTATGTCGTCGAACTTATAGATTAGCTATATTCAAGGCACTTGAAGAAGCAGGGATTTGTGCTGGTATCTATCACGGTCAAATGGACAAAAAAGCACGTGCCGAATCCCACAGGTTATACCACTATTTTGAGGCTCTTATGGAGATGTGCCCTCTCTAA

Protein sequence

MEAILKAVSERSHSGHSSREGLLGGHGYWKWQVLMVPPLVVGKTGIVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLYHYFEALMEMCPL

Homology

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BLAST of CmoCh07G011950 vs. ExPASy Swiss-Prot
Match: O93530 (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis OX=8355 GN=wrn PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-34
Identity = 93/242 (38.43%), Postives = 130/242 (53.72%), Query Frame = 0


Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPI 93
           +++ PL+      V+ L+   I S +LGS Q+ + +Q   ++G+  +++MTPE  CS  I
Sbjct: 534 IVICPLISLMEDQVLQLEMSNISSCFLGSAQSKNVLQ-DVKDGKMRVIYMTPE-FCSRGI 593

Query: 94  SFWSKL-QKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKV 153
           S    L  + GI L A+DEAHCISEWGHDFR  Y+ L  L+ +LP +P VALTATA+  +
Sbjct: 594 SLLQDLDNRYGITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPNVPIVALTATASPSI 653

Query: 154 RSDIISSLKMKDPQVTIGSFDRTNLFYGV-KSFNRGPLFLNELVLDISKYLASG----GS 213
           R DI  SL + +PQVT  SFDR NL+  V +      + L + +  I K   SG    G+
Sbjct: 654 REDITKSLNLHNPQVTCTSFDRPNLYLDVARKTTNISIDLRQFL--IKKQQGSGWEFEGA 713

Query: 214 TIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHR 270
           TI+YC T K  EQ+  +                  L + GI  G YH  M  K R E H 
Sbjct: 714 TIVYCPTRKTSEQVTAE------------------LIKLGIACGTYHAGMGIKQRREVHH 753

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BLAST of CmoCh07G011950 vs. ExPASy Swiss-Prot
Match: Q14191 (Werner syndrome ATP-dependent helicase OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 4.2e-33
Identity = 89/257 (34.63%), Postives = 132/257 (51.36%), Query Frame = 0


Query: 27  GYWKWQVLMVPPLVVGKTGIVMA------------LKQRGIMSEYLGSTQTDSTVQAKAE 86
           GY K      PP+ VGK G+V++            LK   I + +LGS Q+++ V    +
Sbjct: 574 GYGKSLCFQYPPVYVGKIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSEN-VLTDIK 633

Query: 87  NGQYNILFMTPEKACSVPISFWSKLQ-KAGICLFAVDEAHCISEWGHDFRVEYKRLDKLR 146
            G+Y I+++TPE  CS  +    +L+   GI L AVDEAHCISEWGHDFR  +++L  L+
Sbjct: 634 LGKYRIVYVTPE-YCSGNMGLLQQLEADIGITLIAVDEAHCISEWGHDFRDSFRKLGSLK 693

Query: 147 DVLPGLPFVALTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPL-FLN 206
             LP +P VALTATA++ +R DI+  L +++PQ+T   FDR NL+  V+      L  L 
Sbjct: 694 TALPMVPIVALTATASSSIREDIVRCLNLRNPQITCTGFDRPNLYLEVRRKTGNILQDLQ 753

Query: 207 ELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGI 266
             ++  S +    G TIIYC + K  +Q+  +                  L +  +  G 
Sbjct: 754 PFLVKTSSHWEFEGPTIIYCPSRKMTQQVTGE------------------LRKLNLSCGT 810

Query: 267 YHGQMDKKARAESHRLY 270
           YH  M    R + H  +
Sbjct: 814 YHAGMSFSTRKDIHHRF 810

[Close]

BLAST of CmoCh07G011950 vs. ExPASy Swiss-Prot
Match: O09053 (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 87/224 (38.84%), Postives = 121/224 (54.02%), Query Frame = 0


Query: 27  GYWKWQVLMVPPLVVGKTGIVMA------------LKQRGIMSEYLGSTQTDSTVQAKAE 86
           GY K      PP+  GK GIV++            L+   + +  LGS Q+   +    +
Sbjct: 538 GYGKSLCFQYPPVYTGKIGIVISPLISLMEDQVLQLELSNVPACLLGSAQS-KNILGDVK 597

Query: 87  NGQYNILFMTPEKACSVPISFWSKLQKA-GICLFAVDEAHCISEWGHDFRVEYKRLDKLR 146
            G+Y ++++TPE  CS  +    +L  + GI L AVDEAHCISEWGHDFR  ++ L  L+
Sbjct: 598 LGKYRVIYITPE-FCSGNLDLLQQLDSSIGITLIAVDEAHCISEWGHDFRSSFRMLGSLK 657

Query: 147 DVLPGLPFVALTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLF--YGVKSFNRGPLFL 206
             LP +P +AL+ATA++ +R DIIS L +KDPQ+T   FDR NL+   G K+ N      
Sbjct: 658 TALPLVPVIALSATASSSIREDIISCLNLKDPQITCTGFDRPNLYLEVGRKTGNILQDLK 717

Query: 207 NELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDARSGLCRRTY 236
             LV   S      G TIIYC + K  EQ+  +  +  L  RTY
Sbjct: 718 PFLVRKASSAWEFEGPTIIYCPSRKMTEQVTAELGKLNLACRTY 759

[Close]

BLAST of CmoCh07G011950 vs. ExPASy Swiss-Prot
Match: Q9FT72 (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-30
Identity = 87/242 (35.95%), Postives = 126/242 (52.07%), Query Frame = 0


Query: 33  VLMVPPLVVGKTGIVMALKQRGIMSEYLGSTQ---TDSTVQAKAENGQ--YNILFMTPEK 92
           VL+V PL+      VMALK++GI +EYL STQ     + +    ++G+    +L++TPE 
Sbjct: 79  VLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPEL 138

Query: 93  ACSVPISFWSKLQKAG----ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 152
             +    F  KL+K      + L A+DEAHCIS WGHDFR  Y++L  LRD L  +P +A
Sbjct: 139 IATK--GFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLA 198

Query: 153 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 212
           LTATA  KV+ D+I SL +++P V   SF+R N+FY V+  +     L+    D+   L 
Sbjct: 199 LTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKD----LLDNAYTDLGNLLK 258

Query: 213 SGGS--TIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKA 264
           S G+   IIYC      + + V                   L   GI +  YH  ++ K 
Sbjct: 259 SCGNICAIIYCLERTTCDDLSVH------------------LSSIGISSAAYHAGLNSKM 296

[Close]

BLAST of CmoCh07G011950 vs. ExPASy Swiss-Prot
Match: Q9FT73 (ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana OX=3702 GN=RECQL2 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.3e-29
Identity = 91/243 (37.45%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGST---QTDSTVQAKAENGQ--YNILFMTPEKA 93
           L+V PL+      VM L   GI +  L ST   + +  V    E G+    IL++TPEK 
Sbjct: 133 LVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV 192

Query: 94  CSVPISFWSKLQK---AG-ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVAL 153
            S    F SKL+K   AG + L ++DEAHC S+WGHDFR +YK L  L+   P +P VAL
Sbjct: 193 -SKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVAL 252

Query: 154 TATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNR-GPLFLNELVLDISKYLA 213
           TATAT KV++D+I  L +      + S +R NLFY V+  +  G L ++E+   I +  +
Sbjct: 253 TATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYS 312

Query: 214 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 267
           +  S I+YC + K+ EQ                  I   L E GI A  YH  MD   R 
Sbjct: 313 NNESGIVYCFSRKECEQ------------------IAGDLRERGISADYYHADMDANMRE 356

[Close]

BLAST of CmoCh07G011950 vs. ExPASy TrEMBL
Match: A0A6J1EAR9 (ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111432359 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.0e-118
Identity = 224/255 (87.84%), Postives = 225/255 (88.24%), Query Frame = 0


Query: 36  VPPLVVGKTGI------------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVVGKTGI            VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM
Sbjct: 47  VPPLVVGKTGIVVSPLISLMQDQVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 106

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA
Sbjct: 107 TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 166

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA
Sbjct: 167 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 226

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 275
           SGGSTIIYCTTIKDVEQ                  IFKALEEAGICAGIYHGQMDKKARA
Sbjct: 227 SGGSTIIYCTTIKDVEQ------------------IFKALEEAGICAGIYHGQMDKKARA 283

Query: 276 ESHRLYHYFEALMEM 279
           ESHRLYHYFEALME+
Sbjct: 287 ESHRLYHYFEALMEI 283

[Close]

BLAST of CmoCh07G011950 vs. ExPASy TrEMBL
Match: A0A6J1HNL0 (ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465921 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.2e-110
Identity = 212/246 (86.18%), Postives = 213/246 (86.59%), Query Frame = 0


Query: 36  VPPLVVGKTGI------------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVVGKTGI            VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM
Sbjct: 90  VPPLVVGKTGIVVSPLISLMQDQVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 149

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEY RLDKLRDVLPGLPFVA
Sbjct: 150 TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYNRLDKLRDVLPGLPFVA 209

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATAT KVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA
Sbjct: 210 LTATATEKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 269

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 270
           SGGSTIIYCTTIKDVEQ                  IFKALEEAGI AGIYHGQMDKKARA
Sbjct: 270 SGGSTIIYCTTIKDVEQ------------------IFKALEEAGISAGIYHGQMDKKARA 317

[Close]

BLAST of CmoCh07G011950 vs. ExPASy TrEMBL
Match: A0A1S3B4Q2 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 6.0e-107
Identity = 214/292 (73.29%), Postives = 229/292 (78.42%), Query Frame = 0


Query: 1   MEAILKAV----SERSHSGHSSREGLLG-------GHGYWKWQVLMVPPLVVGKTGI--- 60
           MEAILK+     + R +     ++ LLG         G  K     VPPLVVGKTGI   
Sbjct: 1   MEAILKSCFGFSAFRPYQKEIVQDILLGKDCLVVMSTGSGKSLCYQVPPLVVGKTGIVVS 60

Query: 61  ---------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWS 120
                    VMALKQ+GI SEYLGSTQTDSTVQAKAE+GQYNILFMTPEKACSVP+SFWS
Sbjct: 61  PLLSLMQDQVMALKQKGIKSEYLGSTQTDSTVQAKAESGQYNILFMTPEKACSVPMSFWS 120

Query: 121 KLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDII 180
           KL+KAGICLFAVDEAHCISEWGHDFRVEYK+LDKLRDVLPGLPFVALTATAT KVRSDII
Sbjct: 121 KLKKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDII 180

Query: 181 SSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKD 240
           +SLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLF+NELVLDISKY+ASGGSTIIYCTTIKD
Sbjct: 181 NSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKD 240

Query: 241 VEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
           VEQ                  IFKALEEAGI  GIYHGQMDKK+RAESHRL+
Sbjct: 241 VEQ------------------IFKALEEAGISVGIYHGQMDKKSRAESHRLF 274

[Close]

BLAST of CmoCh07G011950 vs. ExPASy TrEMBL
Match: A0A0A0L1A4 (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_4G188732 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.3e-101
Identity = 189/222 (85.14%), Postives = 199/222 (89.64%), Query Frame = 0


Query: 48  MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWSKLQKAGICLF 107
           MALKQRGI SEYLGSTQTDSTVQAKAE+GQYN+LFMTPEKACSVP+SFWSKL+KAGICLF
Sbjct: 1   MALKQRGIKSEYLGSTQTDSTVQAKAESGQYNVLFMTPEKACSVPMSFWSKLKKAGICLF 60

Query: 108 AVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDIISSLKMKDPQV 167
           AVDEAHCISEWGHDFRVEYK+LDKLRDVLP LPFVALTATAT KVRSDII+SLKMKDPQV
Sbjct: 61  AVDEAHCISEWGHDFRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDIINSLKMKDPQV 120

Query: 168 TIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDAR 227
           TIGSFDRTNLFYGVKSFNRGPLF+NE VLDISKY+ASGGSTIIYCTTIKDVEQ       
Sbjct: 121 TIGSFDRTNLFYGVKSFNRGPLFMNEFVLDISKYVASGGSTIIYCTTIKDVEQ------- 180

Query: 228 SGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
                      IFKALEEAGI AGIYHGQMDKK+RAESHRL+
Sbjct: 181 -----------IFKALEEAGISAGIYHGQMDKKSRAESHRLF 204

[Close]

BLAST of CmoCh07G011950 vs. ExPASy TrEMBL
Match: A0A6J1DLT4 (ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111021754 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 2.2e-101
Identity = 196/246 (79.67%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 36  VPPLVVGKTGI------------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVVGKTGI            VMALKQRGI SEYLGSTQTD TVQ KAE G+YN+LFM
Sbjct: 47  VPPLVVGKTGIVVSPLLSLMQDQVMALKQRGIKSEYLGSTQTDPTVQGKAERGEYNVLFM 106

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKACSVP SFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYK+LDKLR+VL GLPFVA
Sbjct: 107 TPEKACSVPTSFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRNVLSGLPFVA 166

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATAT KVR DII+SLKMK PQVTIGSFDRTNLFYGVKSFNRG LFLNELVLDISKY+A
Sbjct: 167 LTATATEKVRFDIINSLKMKGPQVTIGSFDRTNLFYGVKSFNRGALFLNELVLDISKYVA 226

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 270
           SGGSTIIYCTTIKDVEQ                  IFKALEEA I AGIYHGQMDKK+RA
Sbjct: 227 SGGSTIIYCTTIKDVEQ------------------IFKALEEARISAGIYHGQMDKKSRA 274

[Close]

BLAST of CmoCh07G011950 vs. NCBI nr
Match: XP_022924974.1 (uncharacterized protein LOC111432359 [Cucurbita moschata])

HSP 1 Score: 435.3 bits (1118), Expect = 4.1e-118
Identity = 224/255 (87.84%), Postives = 225/255 (88.24%), Query Frame = 0


Query: 36  VPPLVVGKTGI------------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVVGKTGI            VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM
Sbjct: 47  VPPLVVGKTGIVVSPLISLMQDQVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 106

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA
Sbjct: 107 TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 166

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA
Sbjct: 167 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 226

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 275
           SGGSTIIYCTTIKDVEQ                  IFKALEEAGICAGIYHGQMDKKARA
Sbjct: 227 SGGSTIIYCTTIKDVEQ------------------IFKALEEAGICAGIYHGQMDKKARA 283

Query: 276 ESHRLYHYFEALMEM 279
           ESHRLYHYFEALME+
Sbjct: 287 ESHRLYHYFEALMEI 283

[Close]

BLAST of CmoCh07G011950 vs. NCBI nr
Match: KAG6595478.1 (hypothetical protein SDJN03_12031, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414.8 bits (1065), Expect = 5.7e-112
Identity = 213/246 (86.59%), Postives = 215/246 (87.40%), Query Frame = 0


Query: 36  VPPLVVGKTGI------------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVVGKTGI            VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM
Sbjct: 75  VPPLVVGKTGIVVSPLISLMQDQVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 134

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA
Sbjct: 135 TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 194

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATAT KVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA
Sbjct: 195 LTATATEKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 254

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 270
           SGGSTIIYCTTIKDVEQ                  IFKALEEAG+CAGIYHGQMDKKARA
Sbjct: 255 SGGSTIIYCTTIKDVEQ------------------IFKALEEAGVCAGIYHGQMDKKARA 302

[Close]

BLAST of CmoCh07G011950 vs. NCBI nr
Match: XP_023518743.1 (uncharacterized protein LOC111782167 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 6.4e-111
Identity = 213/246 (86.59%), Postives = 214/246 (86.99%), Query Frame = 0


Query: 36  VPPLVVGKTGI------------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVVGKTGI            VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM
Sbjct: 88  VPPLVVGKTGIVVSPLISLMQDQVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 147

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA
Sbjct: 148 TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 207

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATAT KVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA
Sbjct: 208 LTATATEKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 267

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 270
           SGGSTIIYCTTIKDVEQ                  IFKALEEAGI AGIYHGQMDKKARA
Sbjct: 268 SGGSTIIYCTTIKDVEQ------------------IFKALEEAGISAGIYHGQMDKKARA 315

[Close]

BLAST of CmoCh07G011950 vs. NCBI nr
Match: XP_022966161.1 (uncharacterized protein LOC111465921 [Cucurbita maxima])

HSP 1 Score: 409.5 bits (1051), Expect = 2.4e-110
Identity = 212/246 (86.18%), Postives = 213/246 (86.59%), Query Frame = 0


Query: 36  VPPLVVGKTGI------------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVVGKTGI            VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM
Sbjct: 90  VPPLVVGKTGIVVSPLISLMQDQVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 149

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEY RLDKLRDVLPGLPFVA
Sbjct: 150 TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYNRLDKLRDVLPGLPFVA 209

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATAT KVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA
Sbjct: 210 LTATATEKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 269

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 270
           SGGSTIIYCTTIKDVEQ                  IFKALEEAGI AGIYHGQMDKKARA
Sbjct: 270 SGGSTIIYCTTIKDVEQ------------------IFKALEEAGISAGIYHGQMDKKARA 317

[Close]

BLAST of CmoCh07G011950 vs. NCBI nr
Match: XP_038883532.1 (ATP-dependent DNA helicase RecQ-like [Benincasa hispida])

HSP 1 Score: 398.7 bits (1023), Expect = 4.3e-107
Identity = 217/292 (74.32%), Postives = 228/292 (78.08%), Query Frame = 0


Query: 1   MEAILKAV----SERSHSGHSSREGLLG-------GHGYWKWQVLMVPPLVVGKTGI--- 60
           ME ILK+     S R +     ++ LLG         G  K     VPPLVVGKTGI   
Sbjct: 2   METILKSCFGFSSFRLYQKEVIQDILLGKDCLVVMATGSGKSLCYQVPPLVVGKTGIVVS 61

Query: 61  ---------VMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWS 120
                    VMALKQRGI SEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVP SFWS
Sbjct: 62  PLISLMQDQVMALKQRGIKSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPNSFWS 121

Query: 121 KLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDII 180
           KL+KAGICLFAVDEAHCISEWGHDFRVEYK+LDKLRDVLPGLPFVALTATAT KVRSDII
Sbjct: 122 KLKKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDII 181

Query: 181 SSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKD 240
           +SLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLF+NELVLDISKY+ASGGSTIIYCTTIKD
Sbjct: 182 NSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKD 241

Query: 241 VEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
           VEQ                  IFKALEEAGI AGIYHGQMDKK+RAESHRL+
Sbjct: 242 VEQ------------------IFKALEEAGINAGIYHGQMDKKSRAESHRLF 275

[Close]

BLAST of CmoCh07G011950 vs. TAIR 10
Match: AT4G35740.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 87/242 (35.95%), Postives = 126/242 (52.07%), Query Frame = 0


Query: 33  VLMVPPLVVGKTGIVMALKQRGIMSEYLGSTQ---TDSTVQAKAENGQ--YNILFMTPEK 92
           VL+V PL+      VMALK++GI +EYL STQ     + +    ++G+    +L++TPE 
Sbjct: 79  VLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPEL 138

Query: 93  ACSVPISFWSKLQKAG----ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 152
             +    F  KL+K      + L A+DEAHCIS WGHDFR  Y++L  LRD L  +P +A
Sbjct: 139 IATK--GFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLA 198

Query: 153 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 212
           LTATA  KV+ D+I SL +++P V   SF+R N+FY V+  +     L+    D+   L 
Sbjct: 199 LTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKD----LLDNAYTDLGNLLK 258

Query: 213 SGGS--TIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKA 264
           S G+   IIYC      + + V                   L   GI +  YH  ++ K 
Sbjct: 259 SCGNICAIIYCLERTTCDDLSVH------------------LSSIGISSAAYHAGLNSKM 296

[Close]

BLAST of CmoCh07G011950 vs. TAIR 10
Match: AT1G31360.1 (RECQ helicase L2 )

HSP 1 Score: 129.4 bits (324), Expect = 4.5e-30
Identity = 91/243 (37.45%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGST---QTDSTVQAKAENGQ--YNILFMTPEKA 93
           L+V PL+      VM L   GI +  L ST   + +  V    E G+    IL++TPEK 
Sbjct: 133 LVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV 192

Query: 94  CSVPISFWSKLQK---AG-ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVAL 153
            S    F SKL+K   AG + L ++DEAHC S+WGHDFR +YK L  L+   P +P VAL
Sbjct: 193 -SKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVAL 252

Query: 154 TATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNR-GPLFLNELVLDISKYLA 213
           TATAT KV++D+I  L +      + S +R NLFY V+  +  G L ++E+   I +  +
Sbjct: 253 TATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYS 312

Query: 214 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 267
           +  S I+YC + K+ EQ                  I   L E GI A  YH  MD   R 
Sbjct: 313 NNESGIVYCFSRKECEQ------------------IAGDLRERGISADYYHADMDANMRE 356

[Close]

BLAST of CmoCh07G011950 vs. TAIR 10
Match: AT1G31360.2 (RECQ helicase L2 )

HSP 1 Score: 129.4 bits (324), Expect = 4.5e-30
Identity = 91/243 (37.45%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGST---QTDSTVQAKAENGQ--YNILFMTPEKA 93
           L+V PL+      VM L   GI +  L ST   + +  V    E G+    IL++TPEK 
Sbjct: 8   LVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV 67

Query: 94  CSVPISFWSKLQK---AG-ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVAL 153
            S    F SKL+K   AG + L ++DEAHC S+WGHDFR +YK L  L+   P +P VAL
Sbjct: 68  -SKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVAL 127

Query: 154 TATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNR-GPLFLNELVLDISKYLA 213
           TATAT KV++D+I  L +      + S +R NLFY V+  +  G L ++E+   I +  +
Sbjct: 128 TATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYS 187

Query: 214 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 267
           +  S I+YC + K+ EQ                  I   L E GI A  YH  MD   R 
Sbjct: 188 NNESGIVYCFSRKECEQ------------------IAGDLRERGISADYYHADMDANMRE 231

[Close]

BLAST of CmoCh07G011950 vs. TAIR 10
Match: AT4G35740.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.5e-29
Identity = 81/227 (35.68%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 48  MALKQRGIMSEYLGSTQ---TDSTVQAKAENGQ--YNILFMTPEKACSVPISFWSKLQKA 107
           MALK++GI +EYL STQ     + +    ++G+    +L++TPE   +    F  KL+K 
Sbjct: 1   MALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATK--GFMLKLRKL 60

Query: 108 G----ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDIIS 167
                + L A+DEAHCIS WGHDFR  Y++L  LRD L  +P +ALTATA  KV+ D+I 
Sbjct: 61  HSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVID 120

Query: 168 SLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGS--TIIYCTTIK 227
           SL +++P V   SF+R N+FY V+  +     L+    D+   L S G+   IIYC    
Sbjct: 121 SLNLRNPLVLKSSFNRPNIFYEVRYKD----LLDNAYTDLGNLLKSCGNICAIIYCLERT 180

Query: 228 DVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 264
             + + V                   L   GI +  YH  ++ K R+
Sbjct: 181 TCDDLSVH------------------LSSIGISSAAYHAGLNSKMRS 203

[Close]

BLAST of CmoCh07G011950 vs. TAIR 10
Match: AT1G60930.1 (RECQ helicase L4B )

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-24
Identity = 76/242 (31.40%), Postives = 116/242 (47.93%), Query Frame = 0


Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLG-----STQTDSTVQAKAENGQYNILFMTPEKA 93
           L++ PLV      +M L Q  I +  L      + Q +   +  +E  +Y +L++TPEK 
Sbjct: 513 LVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKV 572

Query: 94  CSVPISFWSKLQ----KAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVAL 153
                S    L+    ++ +  F +DEAHC+S+WGHDFR +Y+ L  L+   P +P +AL
Sbjct: 573 AKSE-SLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLAL 632

Query: 154 TATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLAS 213
           TATAT  V+ D++ +L + +  V   SF+R NL+Y V          N+ + DI K++  
Sbjct: 633 TATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT------NKCLEDIDKFIRE 692

Query: 214 G---GSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKA 264
                  IIYC +  D E+                  + +AL   G  A  YHG MD   
Sbjct: 693 NHFDECGIIYCLSRMDCEK------------------VTEALRVFGHKAAFYHGSMDPGK 729

The following BLAST results are available for this feature:

BLAST of CmoCh07G011950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O93530	2.2e-34	38.43	Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis OX=8355 GN=wrn ...	[more]
Q14191	4.2e-33	34.63	Werner syndrome ATP-dependent helicase OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2	[more]
O09053	1.2e-32	38.84	Werner syndrome ATP-dependent helicase homolog OS=Mus musculus OX=10090 GN=Wrn P...	[more]
Q9FT72	2.6e-30	35.95	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE...	[more]
Q9FT73	6.3e-29	37.45	ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana OX=3702 GN=RECQL2 PE...	[more]

BLAST of CmoCh07G011950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAR9	2.0e-118	87.84	ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111432359 PE=3 SV...	[more]
A0A6J1HNL0	1.2e-110	86.18	ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465921 PE=3 SV=1	[more]
A0A1S3B4Q2	6.0e-107	73.29	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1	[more]
A0A0A0L1A4	1.3e-101	85.14	ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_4G188732 PE=3 SV=1	[more]
A0A6J1DLT4	2.2e-101	79.67	ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111021754 PE=3 S...	[more]

BLAST of CmoCh07G011950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924974.1	4.1e-118	87.84	uncharacterized protein LOC111432359 [Cucurbita moschata]	[more]
KAG6595478.1	5.7e-112	86.59	hypothetical protein SDJN03_12031, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023518743.1	6.4e-111	86.59	uncharacterized protein LOC111782167 [Cucurbita pepo subsp. pepo]	[more]
XP_022966161.1	2.4e-110	86.18	uncharacterized protein LOC111465921 [Cucurbita maxima]	[more]
XP_038883532.1	4.3e-107	74.32	ATP-dependent DNA helicase RecQ-like [Benincasa hispida]	[more]

BLAST of CmoCh07G011950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35740.1	1.8e-31	35.95	DEAD/DEAH box RNA helicase family protein	[more]
AT1G31360.1	4.5e-30	37.45	RECQ helicase L2	[more]
AT1G31360.2	4.5e-30	37.45	RECQ helicase L2	[more]
AT4G35740.2	6.5e-29	35.68	DEAD/DEAH box RNA helicase family protein	[more]
AT1G60930.1	1.3e-24	31.40	RECQ helicase L4B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 23..172 e-value: 1.3E-40 score: 140.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 174..270 e-value: 9.8E-7 score: 30.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 31..265
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 47..267
None	No IPR available	PANTHER	PTHR13710:SF120	WERNER SYNDROME ATP-DEPENDENT HELICASE	coord: 47..267
None	No IPR available	CDD	cd17920	DEXHc_RecQ	coord: 35..173 e-value: 9.92561E-55 score: 173.874
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 30..166 score: 13.765957

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G011950.1	CmoCh07G011950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043138	3'-5' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding