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CmoCh07G011750 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTATTATCCTAAACAAAACCTTAAAATTACCCACGCGAAGGCAAAAGATTTTCTTGGGAAGAAAGAAATTGAAGAGTAGAGAGAAGTACAAAGCTCGGTCGTCTTCTTCATAAGCTCCACTTTTCCATTTCCTGCGCCACAGATTACCAATCGAAACTCGCTCTCGGTTAGGGCAAAGAACCAGAAACAATGAGCAGCATAGGCACTGGTTACGATCTCTCCGTCACCACATTCTCCCCCGATGGCCGTGTTTTCCAGATCGAGTACGCCGCAAAGGCCGTCGACAACAGTGGGTATGTCTTTCTTTTTTTTCTCTTCCCCTTCTTTCTTCCATGGACTTTCCCTGAGGTAGTTAGGGATTTTGCGATTTCCTTTTTATGTGAGCTGGGTCTGGAATTCGTTTGCAGGACTGTTATTGGAATCAAATGCAAAGATGGAGTCGTTATGGTAAGTTTTAGAACGCTTTTGAGTGTGTTTCCTCTTGTTTGTGGTTTGTGGTGGAGTGTCTCTCACGTGCAAATCTGATGGGGGTGTTATTGATTCAGGGCGTGGAAAAGCTAATTACCTCGAAGATGATGCTTCCTGGTTCTAATAGAAGAATTCACGCCGTTCATCGTCATTCTGGCATGGTATTTCCTTTGTCTTTTCTCCATCACTGCTTTGAATTCAAGTAGTCCTGTATAAGGGTTTTGATTTTTTTTAGAGCTTTTATTACATAATGGTCGTAGATTACTGATTAAGGAGGGTGCCTTGACTGGGTGGAGACTTGCATATGAATAATGGAATAGAAAAGTTCATTTTCTTGGATCTTCTCATGTTCAAGTGTTTGAAGTTTAACATATAGCAAGAAGTGAACTGTAAAGCTACATGGGCTTGCATTCTAATCTTTTTCTTATTGATGTACTTCGTCATTCAATAACAGGCTGTGGCAGGGTTAGCAGCAGATGGAAGGCAAATAGTTGCTCGAGCGAAGTCTGAAGCAACCAACTATGAAAGGTTGGGACTCTTCTATTTTAGACAGTCTCCAATAACCCACACCTCCCACTCTATACATAAATGAAATTTGTTGTTCTGTAAGAATGCATATTGGATATGAATGTTTTCGGTGATGATACTTCGATTTTATTCAGTTTTCTGCTAATGTTTGAATATGATTCCTGAGTCCTGACTTGATAAATATATTTTAAATAGAGATTAAGATACGACATAACAGATGAACAGTATTAATATTCATTATGTCTTAGCACAAGTATAATTGTACCAGTAAACCATTCCCTGGGAAACAAAGTGACGATGATTGAATTATTGTACTGTCACATGCAAATGAATTGTTTTTTTCTAGAAAGTACATGCCTTCATGAACTTCTAGCTCTGCATACACGTTAATCATACATAGGTACAGTGAGATACTATACTGATGGGAGAAAACAATGGTGTCCAGAGCACTTTAAAAGTGAAGGCATACAGGCTATATGCTATATGATCATGAGAAAAGTTATCAATTAATCTAATGCTTTATCTGAGGTTATCTGAGATGTATTGTTGTTTTTGCATTATCATATTGAATGCTTATCTTGTTTTGTTATGGACTCCTTATGTAGTGTTTATGGTGAACCAATCCCTGTAAAGGAACTAGCTGATCGTGTTGCCAGTTATGTGCATCTCTGTACACTCTACTGGTGGCTCAGGTTTGTCACGATTTCAGTAAGACCTATAGTAATTTGAAACTGCTTCCTTCTTTCTCCTTAAATAGAATTAAAGTTAATGTTGCAGACCTTTTGGATGTGGCGTTATTCTTGGAGGTTATGATAGAGATGGACCACAATTGTACATGGTTGAACCATCCGGTGTTTCTTATGTGAGTTTATGCATTGACATGTTGCAGACTTGTGATATTTCAGTTTTAACTTTAATGCTGTTTTGTTCACAGCGCTTGCAAACTACTTATGCAAATCTATCACTGCTATGAACTTACATTTTTTTGAGGGTTTTTCCAGAGGTACTATGGCGCTGCAATTGGAAAGGGCAGGCAGGCTGCAAAAACGTAAGATTAAAGATTTACTTGTCATGATTCTTCTTTTGGGGGGATTGACTAGACACTCCTCTGTTGCTATCTAATTGAATTTAATGAGAATGAGTTTTCAAAAATGTGGATGCATGACTACTACAATCGGTATTCACAGTAATATAAACAAATGGCATAAGTGGCAGATGGCTACCTAAGGATGTTTCTGTAGGAGATTCATGTGTAGCTTTCTATGATTGACATGTGAATGCTCATTACTCATAATCTTGGAAAATAATATTCATATCAGGGATTTTAGTTGTAGAACCTTCTTGTTACATTGCGAATTTATTGACTAATTTATGGTGGATAATGTAGCCAATATTGAACTTCCAGAATAATGATTTTGTTGTACATAACCTTATAGTTGATACAAGTCCAAAGCACCCTCCACTCAAAATCATGTTTGGAAGTAATTTACAAGTGTTCAAAGTGAACATTCTCATGTTCGTATTAAAACAGTTATTTAGAAATACTCAAACAATGAGTACTTATGTAATTTTTCAGCCTAAATGCTCAACCGGAAGGTATTTAAAAAAGAACTTTGATTAATATAGAACCAAGAAGTACTTTTTACTGAAGTGCTTATAGTTAAAAGGACTTTTGTTTACAAGAATGGGCACTTTCTAATACACCTTTATTCATAATATCTCACCACCTTTGAATATATCCATCAATTTAACATCTCACTAACAAATTGTCTGTTATCCTTATTCATGATAATTTAAGTAATATTCCTGATCTACAAGAATGCTATGACAGGGAAATTGAAAAGTTGAAGCTCTCTGAAATGACATGTCGGCAAGGGATCATTGAAGTAGCCAAGATGTGAGTAACTTCTGAGTTGTTGGGCTTTGCTAAAACAAGTGATGGTGTAGTTTGTCCGAGCAAATGCTTGATTAGAATCTAACTCTTGGTTGCTCTTTTGGCGAGCAGTATTTATGGAGTACATGATGAGGCAAAGGACAAGGACTTCGAGTTGGAAATGAGTTGGATCTGTGATGAGTCCAACCGCCAACATCAGAAGGTACTATTAATGTTATAGAAGAAAATAAAGTGCAATTGTTCTTTTCAAAATTTTGTTACATGATATGTCATGATATTAGTATACCAATTCTGTTCTTCATATCAACATCGATTATGGGTAGCTGAATATTAGCGGTACATAAATTTGATTGTGGAAAGCTGCATCTAAATTCTGAACCGATTACCTAAAACTTAGTTTGCCTTCGGATCTTATGGAAGTTGTGACAGAAATCTACGGTTCATGAATTTTTGTCAGTGGTACATAATTCCTGTGGAAAAAATAGGATGGTATTAGCTGCCTACTACTATTGATATTAAATCGCGTTACGATTTAATGCGAACAGTGTAGTTGAAAGTAATATTAGTATAGTATGAAGATACTATAGTAATAGCTAGTATCCAATTCACGTTAACCTGAAATACTTTAGTATTAGGGAAGTGGCTCTCTGCAAAGCTAGTTCAACCACATGCTTCTTCCATTTTCAGGTCCCGGAGGATCTTCTAGGGGAAGCAAAGGCAGCAGCTAAAGCCGCCCTGGAAGAGATGGATGCTGATTAAGTTAGATATTTTTAGGTGTTCTTACTGTTGCAATTGCTTTATTTAGTTTCAAGCGTCTGGATAGAGTGCCCTGTAAGAATTTTCCAAGGATTCAGGAACAGATAAACTTATTGTGATTTCGATACTGCTTTATGGTACTGTTCTTAATCAAATTGGGAATTTTCTCCTGTAAGCCAGTAGAAGATCTTGCTCTTAAAAACACAGCATCTTCATCATTCATAAGATTGTCTATTTTTTATAAGTAATTGTGTAAAAGAAAATATGTTCCACTGTCGCA GTTTTATTATCCTAAACAAAACCTTAAAATTACCCACGCGAAGGCAAAAGATTTTCTTGGGAAGAAAGAAATTGAAGAGTAGAGAGAAGTACAAAGCTCGGTCGTCTTCTTCATAAGCTCCACTTTTCCATTTCCTGCGCCACAGATTACCAATCGAAACTCGCTCTCGGTTAGGGCAAAGAACCAGAAACAATGAGCAGCATAGGCACTGGTTACGATCTCTCCGTCACCACATTCTCCCCCGATGGCCGTGTTTTCCAGATCGAGTACGCCGCAAAGGCCGTCGACAACAGTGGGACTGTTATTGGAATCAAATGCAAAGATGGAGTCGTTATGGGCGTGGAAAAGCTAATTACCTCGAAGATGATGCTTCCTGGTTCTAATAGAAGAATTCACGCCGTTCATCGTCATTCTGGCATGGCTGTGGCAGGGTTAGCAGCAGATGGAAGGCAAATAGTTGCTCGAGCGAAGTCTGAAGCAACCAACTATGAAAGTGTTTATGGTGAACCAATCCCTGTAAAGGAACTAGCTGATCGTGTTGCCAGTTATGTGCATCTCTGTACACTCTACTGGTGGCTCAGACCTTTTGGATGTGGCGTTATTCTTGGAGGTTATGATAGAGATGGACCACAATTGTACATGGTTGAACCATCCGGTGTTTCTTATAGGTACTATGGCGCTGCAATTGGAAAGGGCAGGCAGGCTGCAAAAACGGAAATTGAAAAGTTGAAGCTCTCTGAAATGACATGTCGGCAAGGGATCATTGAAGTAGCCAAGATTATTTATGGAGTACATGATGAGGCAAAGGACAAGGACTTCGAGTTGGAAATGAGTTGGATCTGTGATGAGTCCAACCGCCAACATCAGAAGGTCCCGGAGGATCTTCTAGGGGAAGCAAAGGCAGCAGCTAAAGCCGCCCTGGAAGAGATGGATGCTGATTAAGTTAGATATTTTTAGGTGTTCTTACTGTTGCAATTGCTTTATTTAGTTTCAAGCGTCTGGATAGAGTGCCCTGTAAGAATTTTCCAAGGATTCAGGAACAGATAAACTTATTGTGATTTCGATACTGCTTTATGGTACTGTTCTTAATCAAATTGGGAATTTTCTCCTGTAAGCCAGTAGAAGATCTTGCTCTTAAAAACACAGCATCTTCATCATTCATAAGATTGTCTATTTTTTATAAGTAATTGTGTAAAAGAAAATATGTTCCACTGTCGCA ATGAGCAGCATAGGCACTGGTTACGATCTCTCCGTCACCACATTCTCCCCCGATGGCCGTGTTTTCCAGATCGAGTACGCCGCAAAGGCCGTCGACAACAGTGGGACTGTTATTGGAATCAAATGCAAAGATGGAGTCGTTATGGGCGTGGAAAAGCTAATTACCTCGAAGATGATGCTTCCTGGTTCTAATAGAAGAATTCACGCCGTTCATCGTCATTCTGGCATGGCTGTGGCAGGGTTAGCAGCAGATGGAAGGCAAATAGTTGCTCGAGCGAAGTCTGAAGCAACCAACTATGAAAGTGTTTATGGTGAACCAATCCCTGTAAAGGAACTAGCTGATCGTGTTGCCAGTTATGTGCATCTCTGTACACTCTACTGGTGGCTCAGACCTTTTGGATGTGGCGTTATTCTTGGAGGTTATGATAGAGATGGACCACAATTGTACATGGTTGAACCATCCGGTGTTTCTTATAGGTACTATGGCGCTGCAATTGGAAAGGGCAGGCAGGCTGCAAAAACGGAAATTGAAAAGTTGAAGCTCTCTGAAATGACATGTCGGCAAGGGATCATTGAAGTAGCCAAGATTATTTATGGAGTACATGATGAGGCAAAGGACAAGGACTTCGAGTTGGAAATGAGTTGGATCTGTGATGAGTCCAACCGCCAACATCAGAAGGTCCCGGAGGATCTTCTAGGGGAAGCAAAGGCAGCAGCTAAAGCCGCCCTGGAAGAGATGGATGCTGATTAA MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGVVMGVEKLITSKMMLPGSNRRIHAVHRHSGMAVAGLAADGRQIVARAKSEATNYESVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGVSYRYYGAAIGKGRQAAKTEIEKLKLSEMTCRQGIIEVAKIIYGVHDEAKDKDFELEMSWICDESNRQHQKVPEDLLGEAKAAAKAALEEMDAD Homology
BLAST of CmoCh07G011750 vs. ExPASy Swiss-Prot
Match: O24362 (Proteasome subunit alpha type-3 OS=Spinacia oleracea OX=3562 GN=PAG1 PE=2 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 3.9e-131 Identity = 229/249 (91.97%), Postives = 241/249 (96.79%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy Swiss-Prot
Match: Q9LSU0 (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PAG1 PE=2 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 4.0e-128 Identity = 220/249 (88.35%), Postives = 239/249 (95.98%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy Swiss-Prot
Match: O23715 (Proteasome subunit alpha type-3 OS=Arabidopsis thaliana OX=3702 GN=PAG1 PE=1 SV=2) HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-127 Identity = 219/249 (87.95%), Postives = 239/249 (95.98%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy Swiss-Prot
Match: P90513 (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii OX=5755 PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 5.3e-88 Identity = 158/243 (65.02%), Postives = 198/243 (81.48%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy Swiss-Prot
Match: Q27563 (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum OX=44689 GN=psmA3 PE=2 SV=2) HSP 1 Score: 320.1 bits (819), Expect = 2.2e-86 Identity = 148/245 (60.41%), Postives = 197/245 (80.41%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy TrEMBL
Match: A0A6J1EGF0 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111432323 PE=3 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.0e-138 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy TrEMBL
Match: A0A6J1HMZ8 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111466093 PE=3 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 7.6e-138 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy TrEMBL
Match: A0A6J1IM78 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111478683 PE=3 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 4.9e-137 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy TrEMBL
Match: A0A6J1GEA6 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111453399 PE=3 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 1.4e-136 Identity = 245/249 (98.39%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CmoCh07G011750 vs. ExPASy TrEMBL
Match: A0A5D3DZU0 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00510 PE=3 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 2.4e-136 Identity = 244/249 (97.99%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of CmoCh07G011750 vs. NCBI nr
Match: XP_022924920.1 (proteasome subunit alpha type-3 [Cucurbita moschata]) HSP 1 Score: 501.5 bits (1290), Expect = 4.1e-138 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh07G011750 vs. NCBI nr
Match: XP_023517693.1 (proteasome subunit alpha type-3-like [Cucurbita pepo subsp. pepo] >KAG6595458.1 Proteasome subunit alpha type-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027457.1 Proteasome subunit alpha type-3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 501.1 bits (1289), Expect = 5.4e-138 Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh07G011750 vs. NCBI nr
Match: XP_022966442.1 (proteasome subunit alpha type-3-like [Cucurbita maxima]) HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh07G011750 vs. NCBI nr
Match: XP_022978852.1 (proteasome subunit alpha type-3 [Cucurbita maxima]) HSP 1 Score: 496.9 bits (1278), Expect = 1.0e-136 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CmoCh07G011750 vs. NCBI nr
Match: XP_023543485.1 (proteasome subunit alpha type-3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136 Identity = 245/249 (98.39%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CmoCh07G011750 vs. TAIR 10
Match: AT2G27020.1 (20S proteasome alpha subunit G1 ) HSP 1 Score: 457.2 bits (1175), Expect = 8.3e-129 Identity = 219/249 (87.95%), Postives = 239/249 (95.98%), Query Frame = 0
BLAST of CmoCh07G011750 vs. TAIR 10
Match: AT3G14290.1 (20S proteasome alpha subunit E2 ) HSP 1 Score: 137.1 bits (344), Expect = 1.9e-32 Identity = 75/207 (36.23%), Postives = 113/207 (54.59%), Query Frame = 0
BLAST of CmoCh07G011750 vs. TAIR 10
Match: AT1G53850.1 (20S proteasome alpha subunit E1 ) HSP 1 Score: 136.0 bits (341), Expect = 4.3e-32 Identity = 74/207 (35.75%), Postives = 113/207 (54.59%), Query Frame = 0
BLAST of CmoCh07G011750 vs. TAIR 10
Match: AT1G53850.2 (20S proteasome alpha subunit E1 ) HSP 1 Score: 136.0 bits (341), Expect = 4.3e-32 Identity = 74/207 (35.75%), Postives = 113/207 (54.59%), Query Frame = 0
BLAST of CmoCh07G011750 vs. TAIR 10
Match: AT1G47250.1 (20S proteasome alpha subunit F2 ) HSP 1 Score: 133.3 bits (334), Expect = 2.8e-31 Identity = 70/171 (40.94%), Postives = 96/171 (56.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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