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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAATCAACGATCATTTTGGAACAAGTTGTCTGATTCATCATCCAAGTGAGTAAACTTCAACTACTTCATTTCATTGTTATAAAAGTTGAAGAAGTGGTATGTAACAACCAAAACCTAAAATCTAAATCCACTACTAGTAGATATTGTTCTCTTCGGACTTTCCCTCAAGATTTTTTTGAAACGTATCTGCTAGGGAGAGGTTTCCGCATCCTTATAAAGGATGCTTCGTTCTCCTCCCCAACCGATATGGGCTCTCACAATCCACTCCCTTCGGGGCCCAGCGTCCTCGTTGGCACTCGTTTCCTTCTCCAATCGATGTGAGAACTCCCAATCCACCTCCTTTAGGGCCAATGTCCTTGTTGGCACATCGTCTCGTGTCCACCTCCTTCGGGGCTCAGCCTCCTCGTTGGCACATCGCCCGATGTCTGGCTCTGTACCATTTGTAACAGTCCAAGCCCACCGCCAGTAGATATTATTCTCTTTAGGCTTTCCCTCAAGATTTTTTTTAAAAACACGTCTACTAAGGAGAGGTTTCCACACCCTTATAAAGGATGCTTCGTTCTCCTCCCCAACCGATGTGCGATCTCACATGCTCTCTTTCAGTGATATTAATATTTTATAGGGTGCAGCAATTATAAACGAACGAACAGCTTCTACCGTAGAATGTCAAACGTTTGTTGCAACTAGTCATCAAGCCAACAATACAATTTAAGACTGAGACTTTACGGAGAAATTCTAGTTTAAGGGGAACTAACATCCCTCTTTATATCTATCAATAGGCTAAGTTACAACCTGACTTGTATTAAATCCCCCATTGATATGAGATAATTGTGGATTGGGGTACTAGACGTCTTCCAAAACGCAATGCTATTACATTGAAACCATCTTATTTCAATTCTTCTCCACATTCATACCAAATGATCTTAAGCAAATTGTAGTTAAATGGTGTTGCCCATCTGAATGAAACCTTCAAATACTTTCTTTATTCTTCTGCTCGATCCAGTACGTGACGTTTTCTTCTTTTGGCCCTGTTTCTTGCCTTCTGGATTTTCAGTCCTCAGCTTCAGTTTCGGCCAGAAGACGTTTCGAGTCCATTTTTGTAGGTGGTCATTACTGTAAGCAGAATTGAATCCATGGAGATCCTCCTTGGACAGCCACATTGTGATATGAGCACAGTATATGCGTTGGTTGTTCTGTATCGTCTCTGAAAGAACATTTCTACATGTGCCAACAACTTGTGTAAGCCTATAAACATCCTCGTTTCATTATGGTGTTCTTGAATGTCCTCTTTTAATCCTTAAACTTTCATCTCAAATATTTGTACTACTTTTATCTCTTGGTTGTGCCTAAGCATTTGTTTTTGTCTCAAATTTCATGCTTTCAGGTTAGCTGGAGTGAGACAAGACACAAAATTTGGAGAATCCCTTGTTTGCAATGGAGACGAGGACGTGATAATTGCAGTTCTTCTCTTCTAGATTCATACCAATCATGGTCGTAAGCATTCTTATGTAAAAATATTTCTCAATCTTGAGGTCTTCTCGAGAGAGATTCCAAAATTTGGTCACAAATTATTTTAGTCCTCGAACTTTCATGAAAGTAACAATTTAATTATTGAACTTTAGAATATATCAATTTAGTCGTTATACCCTAGTCCGGACATTTTCA mRNA sequence ATGGAAATCAACGATCATTTTGGAACAAGTTGTCTGATTCATCATCCAATCCTCAGCTTCAGTTTCGGCCAGAAGACGTTTCGAGTCCATTTTTGTAGGTGGTCATTACTTATATGCGTTGGTTGTTCTGTATCGTCTCTGAAAGAACATTTCTACATGTGCCAACAACTTGTGTTAGCTGGAGTGAGACAAGACACAAAATTTGGAGAATCCCTTGTTTGCAATGGAGACGAGGACGTGATAATTGCAGTTCTTCTCTTCTAGATTCATACCAATCATGGTCGTAAGCATTCTTATGTAAAAATATTTCTCAATCTTGAGGTCTTCTCGAGAGAGATTCCAAAATTTGGTCACAAATTATTTTAGTCCTCGAACTTTCATGAAAGTAACAATTTAATTATTGAACTTTAGAATATATCAATTTAGTCGTTATACCCTAGTCCGGACATTTTCA Coding sequence (CDS) ATGGAAATCAACGATCATTTTGGAACAAGTTGTCTGATTCATCATCCAATCCTCAGCTTCAGTTTCGGCCAGAAGACGTTTCGAGTCCATTTTTGTAGGTGGTCATTACTTATATGCGTTGGTTGTTCTGTATCGTCTCTGAAAGAACATTTCTACATGTGCCAACAACTTGTGTTAGCTGGAGTGAGACAAGACACAAAATTTGGAGAATCCCTTGTTTGCAATGGAGACGAGGACGTGATAATTGCAGTTCTTCTCTTCTAG Protein sequence MEINDHFGTSCLIHHPILSFSFGQKTFRVHFCRWSLLICVGCSVSSLKEHFYMCQQLVLAGVRQDTKFGESLVCNGDEDVIIAVLLF
Homology
BLAST of CmoCh07G011640 vs. NCBI nr
Match: KAG7027447.1 (hypothetical protein SDJN02_11460, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 91.7 bits (226), Expect = 3.4e-15 Identity = 49/70 (70.00%), Postives = 49/70 (70.00%), Query Frame = 0 Query: 18 LSFSFGQKTFRVHFCRWSLLICVGCSVSSLKEHFYMCQQLVLAGVRQDTKFGESLVCNGD 77 LSFSFGQKTFRVHFCRWSLL LAGVRQDTKFGESLVCNGD Sbjct: 1 LSFSFGQKTFRVHFCRWSLL---------------------LAGVRQDTKFGESLVCNGD 49
Query: 78 EDVIIAVLLF 88 EDVIIAVLLF Sbjct: 61 EDVIIAVLLF 49
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG7027447.1 | 3.4e-15 | 70.00 | hypothetical protein SDJN02_11460, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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