CmoCh07G011220 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G011220
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr07: 5907751 .. 5907982 (-)
RNA-Seq ExpressionCmoCh07G011220
SyntenyCmoCh07G011220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGAGATTTCATGCCGTTTTTGACGCGATATCATAGGAAGAAAGAAAGGGTCGAAGGCTTGAAGAGGAAGGAATCAAGAGCATCAACCATGGTAACGTTTTGTGGGTTTCCGAAACTCAACTAAATATCACGATTCTTGTCCCAATAGGTTCCATTTGACAATATCTATAAGATATGTGAAGAAGCTGAACGTGGAGGAAGAAGCTGAACGTGGAGGAAGAAGCTGA

mRNA sequence

ATGATAAGAGATTTCATGCCGTTTTTGACGCGATATCATAGGAAGAAAGAAAGGGTCGAAGGCTTGAAGAGGAAGGAATCAAGAGCATCAACCATGGTAACGTTCCATTTGACAATATCTATAAGATATGTGAAGAAGCTGAACGTGGAGGAAGAAGCTGAACGTGGAGGAAGAAGCTGA

Coding sequence (CDS)

ATGATAAGAGATTTCATGCCGTTTTTGACGCGATATCATAGGAAGAAAGAAAGGGTCGAAGGCTTGAAGAGGAAGGAATCAAGAGCATCAACCATGGTAACGTTCCATTTGACAATATCTATAAGATATGTGAAGAAGCTGAACGTGGAGGAAGAAGCTGAACGTGGAGGAAGAAGCTGA

Protein sequence

MIRDFMPFLTRYHRKKERVEGLKRKESRASTMVTFHLTISIRYVKKLNVEEEAERGGRS
Homology
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BLAST of CmoCh07G011220 vs. NCBI nr
Match: KAG6595404.1 (hypothetical protein SDJN03_11957, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 46/66 (69.70%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 6  MPFLTRYHRKKERVEGLKRKESRASTMVT-----------------FHLTISIRYVKKLN 55
          M FLTRYHRK ERVEGLKRKESRASTMVT                 FHLTISIRYVKKLN
Sbjct: 1  MRFLTRYHRKNERVEGLKRKESRASTMVTFCGFRNSTKYHDACPNRFHLTISIRYVKKLN 60

The following BLAST results are available for this feature:
BLAST of CmoCh07G011220 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G011220 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G011220 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595404.13.2e-1269.70hypothetical protein SDJN03_11957, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmoCh07G011220 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G011220.1CmoCh07G011220.1mRNA