CmoCh07G010680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G010680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Location	Cmo_Chr07: 5500479 .. 5502467 (+)
RNA-Seq Expression	CmoCh07G010680
Synteny	CmoCh07G010680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATAAATTGGTGGGTAAGCGGCAGTTTCTTCATCATTTCAACTCTGCATCATCATCATCCAGCATTCACGTGTTCTTCTCTTTCTCTCTCTCTTTCTCTGCTCCCTCTGTTCTTCCGCCATTAAAGCTCCTTCATCCACTACCACCCGACGCCCTACTCTGTTTTTCACTGTTTTGGATCAAAATGGACGGAAACAACCATGTGCGTTCCTCTTCTTCTCTCACCACTGACCTCTTTGGCTCTAAACACACTTCCTCTTCTTCTACCTCTGGGATTTTTGGCTCTATTTTCTCCCCTTCTTCCAAGGTTTGTTTCATCCTTCTATTCTTTGTCTGTCCGATTTCACTTTCATAATTGATTTTCAGGTTTTTTTTCTTTCTTTCCTTCTTTTTCTCTCACTGATCTCCATGGATTCTCACTCTTCTTCTTCTTGTTTCTTCTAATCTTTCTCTTTTCATATGGCTTTCGATTTTTGTGATTTTATCTCTAATCTGTGTTAATTATTCAGGTGTTAGGGGGAGACTCACTGCTCTCTCGAACCAAAGAGATTGAAAGGGCTTCTGTAAATCAGCCTTGGATCCCCAACGCTGATGATCAAGGTTTGTGTATACATGTAATTTGATTATCTTTCCAAGAAGAAGATTGAGCATTGGTGTTCTTGTTTTATCCTCACTTTGAGCGTCTCACCTGAAAATTGGTTATTCTAGCTCTCTTGATTTTGTATGGTGCTCAAACTGATTTGTTGAACTTCAGCTGGTTCTCTGTTTCCTCAGATAAGGATTCTTTTAAAGAAAGAAAAACAAAACAACTGAAAATATTAGTGGATTATCATTTTGAAGTTTCTCTATTGTATAAAAATGTTTCCTATGCCATGTTCAAGAACATACTGACAGGTTTCATAATCCTTTCAACTTTTCTTTTCTCTTTAGAATTGTAGCCAAACAGGTTGAGAATTCAGAAAAGTGTTTTTAGTTAGCCATATTGCTTTAAGATATTGAGAAAGAAAACATTCTTGATCATGTGTTGAAGAAAATATGTTGCTAGAGAAATCTTCTTAAGAGAAATTTTAGGATTCAATCAACAAACCAGGGATCGATACTTCCAATATCCTGTGACTCTAAGCCAGTTTTGGATTGCTTACGCACCAACTTTGTTTCGAAAATTGCTTGATATTATACTCTTCATTCTTCCTTATTGATAACTTTTATCTCTGCAGATGATACTGCTAATCAAAGACAAAAGGAGAGTCGGGAGACGAAGAATAAAGATTCGAGTTCCATCTATCAGGATCAAAGAGCCCAACCATGTCAGTTTACCTCATCAATCTATTATGGTGGCCAAGATGTTTATGCTCATCCTCAGAATTCTCACAATTCTGGGGTGAACTCGACGGTTAGTTCAACAAATTGATATTCATCACTTCATTTTCTTTGATAAGTTCATAATCTTAAAGCACTAAACATGGTACTACTCTTTTCCTTGAACTGCTTGCTCCTGCTCAAACAATGGTAACATGTAGCTGACTGAACAGACATTGAAATTGAGTATTGTTTTGCCCCCCCAGTGATCTGCCTTGACTTATTCTGGTGATATGTTTTCAGTTCAAGAAGGACGGGGGAGAAGACGATTCTGGAAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATGAAATAATAGAGGTGCTGCTTATGAGAAAGAAAATATTGAAAACTATCTTTGTTTCAAATACTCATACTTTCTTTTGCAAATCATCGTCATTTGCAGGGTCTCTCTATTATTAATTCTAGATCACTTGCCAAGGTTTTATACTTATTAAGGTACTTTTAGTTCTAAGATGATTTTTTTTTACCTTTTGGCTGATTGTTCTATAATTGATCGTTTGTCTCCCTGACTTGTATCTTTCTTTAGAGTTTAAAATTGTAGACTCTGATCATCACCGAACTCCACAAGCTTGCCTTATAATTCCAGAGTTTCGTGGTTTTTCGTGA

mRNA sequence

GTTATAAATTGGTGGGTAAGCGGCAGTTTCTTCATCATTTCAACTCTGCATCATCATCATCCAGCATTCACGTGTTCTTCTCTTTCTCTCTCTCTTTCTCTGCTCCCTCTGTTCTTCCGCCATTAAAGCTCCTTCATCCACTACCACCCGACGCCCTACTCTGTTTTTCACTGTTTTGGATCAAAATGGACGGAAACAACCATGTGCGTTCCTCTTCTTCTCTCACCACTGACCTCTTTGGCTCTAAACACACTTCCTCTTCTTCTACCTCTGGGATTTTTGGCTCTATTTTCTCCCCTTCTTCCAAGGTGTTAGGGGGAGACTCACTGCTCTCTCGAACCAAAGAGATTGAAAGGGCTTCTGTAAATCAGCCTTGGATCCCCAACGCTGATGATCAAGATGATACTGCTAATCAAAGACAAAAGGAGAGTCGGGAGACGAAGAATAAAGATTCGAGTTCCATCTATCAGGATCAAAGAGCCCAACCATGTCAGTTTACCTCATCAATCTATTATGGTGGCCAAGATGTTTATGCTCATCCTCAGAATTCTCACAATTCTGGGGTGAACTCGACGTTCAAGAAGGACGGGGGAGAAGACGATTCTGGAAGTGCTTCAAGAGGAAATTGGTGGCAAGAGTTTAAAATTGTAGACTCTGATCATCACCGAACTCCACAAGCTTGCCTTATAATTCCAGAGTTTCGTGGTTTTTCGTGA

Coding sequence (CDS)

ATGGACGGAAACAACCATGTGCGTTCCTCTTCTTCTCTCACCACTGACCTCTTTGGCTCTAAACACACTTCCTCTTCTTCTACCTCTGGGATTTTTGGCTCTATTTTCTCCCCTTCTTCCAAGGTGTTAGGGGGAGACTCACTGCTCTCTCGAACCAAAGAGATTGAAAGGGCTTCTGTAAATCAGCCTTGGATCCCCAACGCTGATGATCAAGATGATACTGCTAATCAAAGACAAAAGGAGAGTCGGGAGACGAAGAATAAAGATTCGAGTTCCATCTATCAGGATCAAAGAGCCCAACCATGTCAGTTTACCTCATCAATCTATTATGGTGGCCAAGATGTTTATGCTCATCCTCAGAATTCTCACAATTCTGGGGTGAACTCGACGTTCAAGAAGGACGGGGGAGAAGACGATTCTGGAAGTGCTTCAAGAGGAAATTGGTGGCAAGAGTTTAAAATTGTAGACTCTGATCATCACCGAACTCCACAAGCTTGCCTTATAATTCCAGAGTTTCGTGGTTTTTCGTGA

Protein sequence

MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASVNQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQNSHNSGVNSTFKKDGGEDDSGSASRGNWWQEFKIVDSDHHRTPQACLIIPEFRGFS

Homology

[Close]

BLAST of CmoCh07G010680 vs. ExPASy TrEMBL
Match: A0A6J1EV60 (uncharacterized protein LOC111438192 OS=Cucurbita moschata OX=3662 GN=LOC111438192 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.0e-75
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV
Sbjct: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ
Sbjct: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. ExPASy TrEMBL
Match: A0A6J1HNF5 (uncharacterized protein LOC111466230 OS=Cucurbita maxima OX=3661 GN=LOC111466230 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.3e-74
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV
Sbjct: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           NQPWIPNADDQD TANQRQKESRETKNKDS SIYQDQRAQPCQFTSSIYYGGQDVYAHPQ
Sbjct: 61  NQPWIPNADDQDHTANQRQKESRETKNKDSGSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. ExPASy TrEMBL
Match: A0A6J1DDV5 (uncharacterized protein LOC111019480 OS=Momordica charantia OX=3673 GN=LOC111019480 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.7e-54
Identity = 116/150 (77.33%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           M+G   + SSSSLT DLFGSK TS SST+GIFGSIF+PSSKVLGG+SLLS+ KE ER SV
Sbjct: 1   MEGKKQLGSSSSLTIDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           N+PWIPN + +DD AN RQKES+E KNKD SSIYQ+QRAQPC  +SSIYYGGQDVY+  Q
Sbjct: 61  NEPWIPNTEAKDDAANHRQKESQEMKNKDLSSIYQEQRAQPCHLSSSIYYGGQDVYSQSQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNS FKKDGGEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSVFKKDGGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. ExPASy TrEMBL
Match: A0A0A0L143 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303110 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.3e-54
Identity = 118/153 (77.12%), Postives = 128/153 (83.66%), Query Frame = 0


Query: 1   MDGNNHV---RSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIER 60
           M+G  HV    SSSSLTTDLFGS  TS SST+GIFGSIF+PSSKVLG +SLLS TKE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSHTKERER 60

Query: 61  ASVNQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYA 120
            SVN+PW PNA  QDD AN  QKES+ETKNKD SSIYQDQRAQPC  +SSIYYGGQDVY 
Sbjct: 61  NSVNEPWNPNAGAQDDNANHTQKESQETKNKDMSSIYQDQRAQPCHLSSSIYYGGQDVYT 120

Query: 121 HPQNSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           HPQNS+NSG NS +KK+GGEDDSGSASRGNWWQ
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQ 153

[Close]

BLAST of CmoCh07G010680 vs. ExPASy TrEMBL
Match: A0A5D3DIY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001300 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.3e-53
Identity = 116/153 (75.82%), Postives = 128/153 (83.66%), Query Frame = 0


Query: 1   MDGNNHV---RSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIER 60
           M+G  HV    SSSSLTTDLFGS  TS SST+GIFGSIF+PSSKVLG +SLLS+TKE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSQTKERER 60

Query: 61  ASVNQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYA 120
            SVN+PW PNA+ QDD AN  QKES+E KNKD SSIYQDQ AQPC  +SSIYYGGQDVY 
Sbjct: 61  NSVNEPWNPNAEAQDDNANHTQKESQEMKNKDMSSIYQDQSAQPCHLSSSIYYGGQDVYT 120

Query: 121 HPQNSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           HPQNS+NSG NS +KK+GGEDDSGSASRGNWWQ
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQ 153

[Close]

BLAST of CmoCh07G010680 vs. NCBI nr
Match: XP_022931917.1 (uncharacterized protein LOC111438192 [Cucurbita moschata])

HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV
Sbjct: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ
Sbjct: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. NCBI nr
Match: XP_022966597.1 (uncharacterized protein LOC111466230 [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 1.9e-73
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV
Sbjct: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           NQPWIPNADDQD TANQRQKESRETKNKDS SIYQDQRAQPCQFTSSIYYGGQDVYAHPQ
Sbjct: 61  NQPWIPNADDQDHTANQRQKESRETKNKDSGSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. NCBI nr
Match: KAG6595356.1 (hypothetical protein SDJN03_11909, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.4 bits (729), Expect = 3.3e-73
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           MDGNNHVRSSSSL TDLFGSK TSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV
Sbjct: 1   MDGNNHVRSSSSLATDLFGSKRTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ
Sbjct: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. NCBI nr
Match: XP_023517047.1 (uncharacterized protein LOC111780922 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIF SIFSPSSKVLGGDSLLSRTKEIERASV
Sbjct: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFASIFSPSSKVLGGDSLLSRTKEIERASV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ
Sbjct: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNSTFKKD GEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSTFKKDWGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. NCBI nr
Match: KAG7027363.1 (hypothetical protein SDJN02_11375 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDGNNHVRSSSSLTTDLFGSKHTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60
           MDGNNHVRSSSSLTTDLFGSK TSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV
Sbjct: 1   MDGNNHVRSSSSLTTDLFGSKRTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASV 60

Query: 61  NQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120
           NQPWIPNADDQDDTANQRQKESRE KNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ
Sbjct: 61  NQPWIPNADDQDDTANQRQKESREMKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQ 120

Query: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 151
           NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ
Sbjct: 121 NSHNSGVNSTFKKDGGEDDSGSASRGNWWQ 150

[Close]

BLAST of CmoCh07G010680 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 114.4 bits (285), Expect = 9.4e-26
Identity = 76/143 (53.15%), Postives = 91/143 (63.64%), Query Frame = 0


Query: 9   SSSSLTTDLFGSK-HTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASVNQPWIPN 68
           SSSSLT++LFGS+ + SS S+SGI GSIF P SKVLG +S+  R + +     N+     
Sbjct: 15  SSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESV--RQETVTGGCWNEKTSKT 74

Query: 69  ADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQNSHNSGV 128
             + D         +RE +    S   QDQR QPC  +SSIYYGG DVY  PQNS +   
Sbjct: 75  GGNVD--------RNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQPQNSTS--- 134

Query: 129 NSTFKKDGGEDDSGSASRGNWWQ 151
           NST KKDGGEDDSGSASRGNWWQ
Sbjct: 135 NSTNKKDGGEDDSGSASRGNWWQ 144

[Close]

BLAST of CmoCh07G010680 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 76.3 bits (186), Expect = 2.8e-14
Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 9   SSSSLTTDLFGSK-HTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASVNQPWIPN 68
           SSSSLT++LFGS+ + SS S+SGI GSIF P SKVLG +S+  R + +     N+     
Sbjct: 15  SSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESV--RQETVTGGCWNEKTSKT 74

Query: 69  ADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQNS 123
             + D         +RE +    S   QDQR QPC  +SSIYYGG DVY  PQNS
Sbjct: 75  GGNVD--------RNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQPQNS 119

[Close]

BLAST of CmoCh07G010680 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-13
Identity = 61/144 (42.36%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 9   SSSSLTTDLFGSK--HTSSSSTSGIFGSIFSPSSKVLGGDSLLSRTKEIERASVNQPWIP 68
           SSSS    +FG +  H+ SSST+G+F SIF P S V  G +L SR      A+  QP   
Sbjct: 13  SSSSSLDHIFGPRVSHSYSSSTTGLFKSIFPPPSAVTQG-NLTSR----NGAAKYQP--- 72

Query: 69  NADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQNSHNSG 128
                 +T N+R + S   KNK+  S   ++   PC  +SSIYYGGQD Y+    + ++ 
Sbjct: 73  ---TNFETPNERGERS---KNKERKSYQSEETQPPCNLSSSIYYGGQDNYSSSTTNPDA- 132

Query: 129 VNSTFKKDGGEDDSGSASRGNWWQ 151
               +KKDG E DS SASRGNWW+
Sbjct: 133 ----YKKDGEEGDSESASRGNWWE 137

[Close]

BLAST of CmoCh07G010680 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 6.5e-11
Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 9   SSSSLTT--DLFGSKHTSSSSTS--GIFGSIFSPSSKVLGGDSLLSRTKEIERASVNQPW 68
           SSSSL++   +FG + +SSSS+S  G+F SIF P S     D L  +     +    +  
Sbjct: 16  SSSSLSSFDHIFGPRVSSSSSSSATGLFKSIFPPPS----ADQLGRQVDFASQGGHVKYQ 75

Query: 69  IPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDVYAHPQNSHN 128
            PNA            +   +  K+  S Y ++   PC  +SS+YYGGQ+ Y    +S  
Sbjct: 76  SPNA------------KGERSNKKEKKSYYNEETEPPCHLSSSLYYGGQETY----SSTT 135

Query: 129 SGVNSTFKKDGGEDDSGSASRGNWWQ 151
           +  + T+KKDG E DS  ASRGNWW+
Sbjct: 136 TTTHDTYKKDGEEGDSKRASRGNWWE 141

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BLAST of CmoCh07G010680 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08
Identity = 55/160 (34.38%), Postives = 74/160 (46.25%), Query Frame = 0


Query: 1   MDGNNHVRS----SSSLTTDLFGSKHTS-SSSTSGIFGSIFSPSSKVLGGDSLLSRTKEI 60
           M+G   V S    SSS T +LFGSK  S  SS+SGIF ++F   SK              
Sbjct: 1   MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPSK-------------- 60

Query: 61  ERASVNQPWIPNADDQDDTANQRQKESRETKNKDSSSIYQDQRAQPCQFTSSIYYGGQDV 120
                      +A D  ++ +  Q + RE+ N       Q+ R +PC  +SS+YYGGQDV
Sbjct: 61  ----------GSARDGSNSKHGSQAQRRESLNA------QEDRVEPCHLSSSLYYGGQDV 120

Query: 121 YAHPQNSHNSGVNSTFKKDGGEDDSG-----SASRGNWWQ 151
           YA    +         ++  GEDD+        SRGNWWQ
Sbjct: 121 YARSTTNQTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQ 130

The following BLAST results are available for this feature:

BLAST of CmoCh07G010680 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh07G010680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV60	5.0e-75	100.00	uncharacterized protein LOC111438192 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]
A0A6J1HNF5	9.3e-74	98.67	uncharacterized protein LOC111466230 OS=Cucurbita maxima OX=3661 GN=LOC111466230...	[more]
A0A6J1DDV5	3.7e-54	77.33	uncharacterized protein LOC111019480 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A0A0L143	6.3e-54	77.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303110 PE=4 SV=1	[more]
A0A5D3DIY4	5.3e-53	75.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh07G010680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931917.1	1.0e-74	100.00	uncharacterized protein LOC111438192 [Cucurbita moschata]	[more]
XP_022966597.1	1.9e-73	98.67	uncharacterized protein LOC111466230 [Cucurbita maxima]	[more]
KAG6595356.1	3.3e-73	98.67	hypothetical protein SDJN03_11909, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023517047.1	4.3e-73	98.67	uncharacterized protein LOC111780922 [Cucurbita pepo subsp. pepo]	[more]
KAG7027363.1	4.3e-73	98.67	hypothetical protein SDJN02_11375 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh07G010680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02020.1	9.4e-26	53.15	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT5G02020.2	2.8e-14	46.96	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT2G39855.2	2.4e-13	42.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G55646.1	6.5e-11	36.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G59080.1	1.0e-08	34.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..99
None	No IPR available	PANTHER	PTHR33738	EMB\|CAB82975.1	coord: 1..150
None	No IPR available	PANTHER	PTHR33738:SF1	PLANT/T7H20-70 PROTEIN	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G010680.1	CmoCh07G010680.1	mRNA