CmoCh07G009450 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGGAAGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGCTAGGGAGCAAAGTGGTGCCTTGTACACCCTGCGAGCACTGTTGCCAATGGGTTCTGTGGTCTCCTTTGCACGAGGATTGCTTCATTCCACGAGATGTCCCAAAGGGTCACTTGGTTGTTTATGTGGGTGAGAATTACAGAAGATTTGTGATCAAAATTAGTCTTCTGAATCACCCTTTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTGCTAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCACCGTGCTAGCTCGCCATGCTAA ATGAAGGGGAAGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGCTAGGGAGCAAAGTGGTGCCTTGTACACCCTGCGAGCACTGTTGCCAATGGGTTCTGTGGTCTCCTTTGCACGAGGATTGCTTCATTCCACGAGATGTCCCAAAGGGTCACTTGGTTGTTTATGTGGGTGAGAATTACAGAAGATTTGTGATCAAAATTAGTCTTCTGAATCACCCTTTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTGCTAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCACCGTGCTAGCTCGCCATGCTAA ATGAAGGGGAAGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGCTAGGGAGCAAAGTGGTGCCTTGTACACCCTGCGAGCACTGTTGCCAATGGGTTCTGTGGTCTCCTTTGCACGAGGATTGCTTCATTCCACGAGATGTCCCAAAGGGTCACTTGGTTGTTTATGTGGGTGAGAATTACAGAAGATTTGTGATCAAAATTAGTCTTCTGAATCACCCTTTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTGCTAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCACCGTGCTAGCTCGCCATGCTAA MKGKFIRACANKWRKLGSKVVPCTPCEHCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENYRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVHRASSPC Homology
BLAST of CmoCh07G009450 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 4.9e-12 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-11 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.1e-11 Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy TrEMBL
Match: A0A6J1HEL5 (auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111463496 PE=3 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.0e-65 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy TrEMBL
Match: A0A6J1I941 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111471142 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 9.8e-64 Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy TrEMBL
Match: A0A1S4DXL1 (indole-3-acetic acid-induced protein ARG7 OS=Cucumis melo OX=3656 GN=LOC103491168 PE=3 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 8.6e-60 Identity = 107/113 (94.69%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy TrEMBL
Match: A0A6J1CQ37 (uncharacterized protein LOC111013697 OS=Momordica charantia OX=3673 GN=LOC111013697 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58 Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of CmoCh07G009450 vs. ExPASy TrEMBL
Match: A0A2I4H5T8 (auxin-responsive protein SAUR50 OS=Juglans regia OX=51240 GN=LOC109013770 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49 Identity = 89/114 (78.07%), Postives = 100/114 (87.72%), Query Frame = 0
BLAST of CmoCh07G009450 vs. NCBI nr
Match: XP_022963217.1 (auxin-induced protein 15A [Cucurbita moschata]) HSP 1 Score: 257.3 bits (656), Expect = 6.3e-65 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CmoCh07G009450 vs. NCBI nr
Match: KAG6595237.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 254.2 bits (648), Expect = 5.3e-64 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of CmoCh07G009450 vs. NCBI nr
Match: XP_023518107.1 (auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63 Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of CmoCh07G009450 vs. NCBI nr
Match: XP_022972605.1 (auxin-induced protein 15A-like [Cucurbita maxima]) HSP 1 Score: 252.3 bits (643), Expect = 2.0e-63 Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of CmoCh07G009450 vs. NCBI nr
Match: XP_038883934.1 (auxin-responsive protein SAUR50 [Benincasa hispida]) HSP 1 Score: 240.7 bits (613), Expect = 6.1e-60 Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of CmoCh07G009450 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 145.2 bits (365), Expect = 3.2e-35 Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of CmoCh07G009450 vs. TAIR 10
Match: AT3G53250.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 120.9 bits (302), Expect = 6.5e-28 Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of CmoCh07G009450 vs. TAIR 10
Match: AT5G03310.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 95.1 bits (235), Expect = 3.8e-20 Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of CmoCh07G009450 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of CmoCh07G009450 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 79.0 bits (193), Expect = 2.8e-15 Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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