CmoCh07G008830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G008830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 .
Location	Cmo_Chr07: 4175766 .. 4176278 (-)
RNA-Seq Expression	CmoCh07G008830
Synteny	CmoCh07G008830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTGTTTGATCGTCCAACAAAACCCCATCAGAATCATGAAACCCGACGGCAAAATCCTCGAATACAAATCCCCAACAAGAGTATTCCAAGTCCTCTCCGACTTCTCCGGCCACGCCATCTCCGACGCCGTTCCAGTCACCCACCATCTCCAACAGACCACCAAGCTCCTCAGCGGCCACCTCTATTTCCTGATCCCCACGGCGGGGCCGGAGGCAGGGGAGAAAAGGGGGAAGAAGGCGGTTCGTTTTGCAGAGCCGGAGAAGGAAACCGGCGGCGGGGAAGGGAAGGTGATGAGAATAAAGGTAGTGATGACGAAGAAAGAGCTGGAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGATGAAATGATTTGTAAGATCAAAAGTGGGAGTGGGGAAATTAGTTGCAGAGAATTGGAGGAAGAAGAAGATGATGATGATGATGAGGAGTTGCACAAATGGAGGCCTTCTCTTCAGAGCATACCGGAAAGTGAAGTTGCTTGCTAG

mRNA sequence

ATGGGGAACTGTTTGATCGTCCAACAAAACCCCATCAGAATCATGAAACCCGACGGCAAAATCCTCGAATACAAATCCCCAACAAGAGTATTCCAAGTCCTCTCCGACTTCTCCGGCCACGCCATCTCCGACGCCGTTCCAGTCACCCACCATCTCCAACAGACCACCAAGCTCCTCAGCGGCCACCTCTATTTCCTGATCCCCACGGCGGGGCCGGAGGCAGGGGAGAAAAGGGGGAAGAAGGCGGTTCGTTTTGCAGAGCCGGAGAAGGAAACCGGCGGCGGGGAAGGGAAGGTGATGAGAATAAAGGTAGTGATGACGAAGAAAGAGCTGGAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGATGAAATGATTTGTAAGATCAAAAGTGGGAGTGGGGAAATTAGTTGCAGAGAATTGGAGGAAGAAGAAGATGATGATGATGATGAGGAGTTGCACAAATGGAGGCCTTCTCTTCAGAGCATACCGGAAAGTGAAGTTGCTTGCTAG

Coding sequence (CDS)

ATGGGGAACTGTTTGATCGTCCAACAAAACCCCATCAGAATCATGAAACCCGACGGCAAAATCCTCGAATACAAATCCCCAACAAGAGTATTCCAAGTCCTCTCCGACTTCTCCGGCCACGCCATCTCCGACGCCGTTCCAGTCACCCACCATCTCCAACAGACCACCAAGCTCCTCAGCGGCCACCTCTATTTCCTGATCCCCACGGCGGGGCCGGAGGCAGGGGAGAAAAGGGGGAAGAAGGCGGTTCGTTTTGCAGAGCCGGAGAAGGAAACCGGCGGCGGGGAAGGGAAGGTGATGAGAATAAAGGTAGTGATGACGAAGAAAGAGCTGGAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGATGAAATGATTTGTAAGATCAAAAGTGGGAGTGGGGAAATTAGTTGCAGAGAATTGGAGGAAGAAGAAGATGATGATGATGATGAGGAGTTGCACAAATGGAGGCCTTCTCTTCAGAGCATACCGGAAAGTGAAGTTGCTTGCTAG

Protein sequence

MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC

Homology

[Close]

BLAST of CmoCh07G008830 vs. ExPASy TrEMBL
Match: A0A6J1HG15 (uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC111463230 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.4e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of CmoCh07G008830 vs. ExPASy TrEMBL
Match: A0A6J1I5B2 (uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.6e-84
Identity = 162/170 (95.29%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIV+Q PIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHL+QTTKLLS
Sbjct: 1   MGNCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLKQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAG EA EKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGAEAVEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           TADEMICKIKSGSGEISCRELEEEE  +DDEELHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCRELEEEE--EDDEELHKWRPSLQSIPESEVAC 168

[Close]

BLAST of CmoCh07G008830 vs. ExPASy TrEMBL
Match: A0A0A0KHH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.8e-61
Identity = 131/172 (76.16%), Postives = 145/172 (84.30%), Query Frame = 0


Query: 3   NCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGH 62
           NCL +   PIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPV+HHL +T KLLSGH
Sbjct: 5   NCLFIDNKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVSHHLHRTAKLLSGH 64

Query: 63  LYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGITA 122
           LYFLIP    E  EK+ KKAVRFAEPEKET  G G V+RIKVVMTKKEL+EMVERGGI+A
Sbjct: 65  LYFLIP---KEPEEKKPKKAVRFAEPEKETATG-GGVVRIKVVMTKKELQEMVERGGISA 124

Query: 123 DEMICKIKSGSGEISCR-ELEEEEDDDDDE---ELHKWRPSLQSIPESEVAC 171
           +EMICKIK+G GEIS R E+EEEEDDDDD+   EL +W+P L+SIPESEVAC
Sbjct: 125 EEMICKIKNGCGEISSRSEMEEEEDDDDDDEESELQRWKPVLESIPESEVAC 172

[Close]

BLAST of CmoCh07G008830 vs. ExPASy TrEMBL
Match: A0A1S3CHA7 (uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.7e-60
Identity = 128/173 (73.99%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 3   NCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGH 62
           NCL V   PIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPVTHHL +T KLLSGH
Sbjct: 5   NCLFVDHKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVTHHLHRTAKLLSGH 64

Query: 63  LYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGE--GKVMRIKVVMTKKELEEMVERGGI 122
           LYFLIP    E  EK+ KKAVRFAEPEKET      G V+RIKVVMTKKEL+EMVERGGI
Sbjct: 65  LYFLIP---KEPHEKKPKKAVRFAEPEKETASATTGGGVVRIKVVMTKKELQEMVERGGI 124

Query: 123 TADEMICKIKSGSGEISCR---ELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           +A+EMICKIK+G GEIS R   E EEEE++D++ EL +W+P L+SIPESEVAC
Sbjct: 125 SAEEMICKIKNGRGEISSRSEMEEEEEEEEDEESELQRWKPVLESIPESEVAC 174

[Close]

BLAST of CmoCh07G008830 vs. ExPASy TrEMBL
Match: A0A6J1IRC0 (uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.7e-60
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 3   NCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGH 62
           NCL V Q PIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPV+ HL  T KLL+GH
Sbjct: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGH 64

Query: 63  LYFLIPTAGPEAGEKRGKKAVRFAEPEK----ETGGGEGKVMRIKVVMTKKELEEMVERG 122
           LYFLIPT   EA EK+ KK VRFA+ EK    E GGG G+V+RIK+VMTKKEL+EMVERG
Sbjct: 65  LYFLIPT---EAAEKKPKKTVRFADSEKEESGENGGGTGRVVRIKLVMTKKELQEMVERG 124

Query: 123 GITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           GI+ DEM+CKIKSGSGEISC ELEE E+        +W+P+LQSIPESEVAC
Sbjct: 125 GISGDEMVCKIKSGSGEISCTELEEAEE-------QRWKPALQSIPESEVAC 166

[Close]

BLAST of CmoCh07G008830 vs. NCBI nr
Match: XP_022962863.1 (uncharacterized protein LOC111463230 [Cucurbita moschata])

HSP 1 Score: 341.3 bits (874), Expect = 4.9e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of CmoCh07G008830 vs. NCBI nr
Match: XP_022972617.1 (uncharacterized protein LOC111471158 [Cucurbita maxima])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 162/170 (95.29%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIV+Q PIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHL+QTTKLLS
Sbjct: 1   MGNCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLKQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAG EA EKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGAEAVEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           TADEMICKIKSGSGEISCRELEEEE  +DDEELHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCRELEEEE--EDDEELHKWRPSLQSIPESEVAC 168

[Close]

BLAST of CmoCh07G008830 vs. NCBI nr
Match: KAG6595182.1 (hypothetical protein SDJN03_11735, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.2 bits (814), Expect = 4.4e-83
Identity = 161/170 (94.71%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           TADEMICKIKSGSGEISC EL        DEELHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCTEL--------DEELHKWRPSLQSIPESEVAC 162

[Close]

BLAST of CmoCh07G008830 vs. NCBI nr
Match: XP_023518412.1 (uncharacterized protein LOC111781910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 162/171 (94.74%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAIS-DAVPVTHHLQQTTKLL 60
           MGNCL+VQQNPIRIMKPDGKILEYKSP RVFQVLSDFSGHAIS DAVPVTHHLQQTTKLL
Sbjct: 1   MGNCLMVQQNPIRIMKPDGKILEYKSPIRVFQVLSDFSGHAISDDAVPVTHHLQQTTKLL 60

Query: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGG 120
           SGHLYFLIPTAGPEAGEKRGKKAVRFA+PEKETGGGEGKVMRIKVVMTKKELEEMVERGG
Sbjct: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFADPEKETGGGEGKVMRIKVVMTKKELEEMVERGG 120

Query: 121 ITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           ITAD+MI KIK+GSGEISCRELEEEE  DDDEELHKWRPSLQSIPESEVAC
Sbjct: 121 ITADQMISKIKTGSGEISCRELEEEE-HDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of CmoCh07G008830 vs. NCBI nr
Match: KAG7027198.1 (hypothetical protein SDJN02_11209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 160/170 (94.12%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKV+RIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVIRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 171
           TADEMICKIKSGSGEISC EL        DEELHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCTEL--------DEELHKWRPSLQSIPESEVAC 162

[Close]

BLAST of CmoCh07G008830 vs. TAIR 10
Match: AT3G10120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 6.1e-22
Identity = 66/186 (35.48%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGH-AISDAVPVTHHLQQTTKLL 60
           MGNCL++++  I+IM+ DGK++EY+ P +V  +L+ FS H ++ D++    HL    KLL
Sbjct: 1   MGNCLVMEKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPHYSLFDSLTNNCHLHPQAKLL 60

Query: 61  SGHLYFLIPTAGPEAGE-KRGKKAVRFAEPEKE---------------TGGGEGKVMRIK 120
            G LY+L+P         K+  K VRFA PE E               T      V+R+K
Sbjct: 61  CGRLYYLLPQETNSIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEKTNGVVRVK 120

Query: 121 VVMTKKELEEMVERGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHK--WRPSLQ 168
           +V++K+ELE++++ G +              E+  R L ++   DDD+E HK  WRP L 
Sbjct: 121 MVVSKQELEKLLQGGSV-------------HEMVYRTLAKQHLCDDDDECHKEGWRPLLD 173

[Close]

BLAST of CmoCh07G008830 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 6.1e-22
Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCL++++  I+I++ DGK+LEY+ P  V  +L+ FSGH+IS       HL    KLLS
Sbjct: 1   MGNCLVMEKKVIKIVRDDGKVLEYREPISVHHILTQFSGHSISHN---NTHLLPDAKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKE------------------TGGGEGK---V 120
           G LY+L+PT      +K+  K V FA PE E                    G + K   V
Sbjct: 61  GRLYYLLPTT---MTKKKVNKKVTFANPEVEGDERLLREEEDSSESNSNIDGDDTKNVTV 120

Query: 121 MRIKVVMTKKELEEMVERGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPS 168
           +R+K+V+ K+ELE++++ G +   EM+ +       +  + L    DDDD E    WRP+
Sbjct: 121 VRMKIVVHKQELEKLLQGGSV--HEMMYQ------TLEKQLLLTSSDDDDLECNSGWRPA 174

[Close]

BLAST of CmoCh07G008830 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-08
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 77  KRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMV-ERGGITADEMICKIKSGSG- 136
           + GK + R  E  + +   E KV+RIKVV+TKKEL +++  + GI + + +  +   SG 
Sbjct: 29  EEGKTSFRGEEESERSTEEESKVVRIKVVVTKKELRQILGHKNGINSIQQLVHVLKDSGR 88

Query: 137 EISCRELEEEEDDDDDEELHKWRPSLQSIPES 167
            IS    EE+E ++ DE    WRP+L+SIPES
Sbjct: 89  NISMASYEEDEKEEGDE---NWRPTLESIPES 117

[Close]

BLAST of CmoCh07G008830 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 30/80 (37.50%), Postives = 40/80 (50.00%), Query Frame = 0


Query: 1  MGNCLI------VQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAV-----PVT 60
          MGNCL        +   I+++K DG +LE+ SP     V   FSGHA+  AV     P+ 
Sbjct: 1  MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61 H-HLQQTTKLLSGHLYFLIP 69
          H HL     L+ G  Y+L P
Sbjct: 61 HDHL-----LVPGQSYYLFP 75

[Close]

BLAST of CmoCh07G008830 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.0e-04
Identity = 21/73 (28.77%), Postives = 35/73 (47.95%), Query Frame = 0


Query: 1  MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPV------THHLQQ 60
          MGN ++V++N +++MK DG I   K+P        ++ G  + D+  V         L+ 
Sbjct: 1  MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61 TTKLLSGHLYFLI 68
             L   H YFL+
Sbjct: 61 NQILKPNHTYFLV 73

The following BLAST results are available for this feature:

BLAST of CmoCh07G008830 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh07G008830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HG15	2.4e-90	100.00	uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1I5B2	9.6e-84	95.29	uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158...	[more]
A0A0A0KHH5	1.8e-61	76.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1	[more]
A0A1S3CHA7	5.7e-60	73.99	uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=...	[more]
A0A6J1IRC0	9.7e-60	72.67	uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765...	[more]

BLAST of CmoCh07G008830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962863.1	4.9e-90	100.00	uncharacterized protein LOC111463230 [Cucurbita moschata]	[more]
XP_022972617.1	2.0e-83	95.29	uncharacterized protein LOC111471158 [Cucurbita maxima]	[more]
KAG6595182.1	4.4e-83	94.71	hypothetical protein SDJN03_11735, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023518412.1	1.3e-82	94.74	uncharacterized protein LOC111781910 [Cucurbita pepo subsp. pepo]	[more]
KAG7027198.1	1.3e-82	94.12	hypothetical protein SDJN02_11209, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmoCh07G008830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10120.1	6.1e-22	35.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G03890.1	6.1e-22	37.77	unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cel...	[more]
AT3G21680.1	3.8e-08	40.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G64700.1	1.1e-04	37.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G37840.1	2.0e-04	28.77	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..165 e-value: 3.9E-18 score: 66.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..170
None	No IPR available	PANTHER	PTHR33148:SF46	EXPRESSED PROTEIN	coord: 1..166
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G008830.1	CmoCh07G008830.1	mRNA