CmoCh07G008630 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G008630
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
LocationCmo_Chr07: 4080892 .. 4081227 (-)
RNA-Seq ExpressionCmoCh07G008630
SyntenyCmoCh07G008630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGAAGAAACAGTAGAGAAGGAGGTGCGCCGAAGTTGGAGCTGAAACTGAACCTGTCGCCGCCGAGAGGCGGAGGAAACAGAGGAGTGGAATCGCCGAACCGGTCAGCCACCGTGTCGCCGACGTCGCCGCCGAGCTCATGTGTGTCGTCGGAGGCGGCGAGATCGTATTCGAACAGCCCTGAAACGGCGACGATGATGCTTGTGGGATGTCCACGTTGCTTGATGTACGTGATGCTGTCGGAACAAGACCCGAAATGTCCGAAATGCAAAAGCACTGTCCTTCTCGATGTTCTCCACGATAATACCGCCGTTAAAACCAGGCAATCCTAG

mRNA sequence

ATGAATCGAAGAAACAGTAGAGAAGGAGGTGCGCCGAAGTTGGAGCTGAAACTGAACCTGTCGCCGCCGAGAGGCGGAGGAAACAGAGGAGTGGAATCGCCGAACCGGTCAGCCACCGTGTCGCCGACGTCGCCGCCGAGCTCATGTGTGTCGTCGGAGGCGGCGAGATCGTATTCGAACAGCCCTGAAACGGCGACGATGATGCTTGTGGGATGTCCACGTTGCTTGATGTACGTGATGCTGTCGGAACAAGACCCGAAATGTCCGAAATGCAAAAGCACTGTCCTTCTCGATGTTCTCCACGATAATACCGCCGTTAAAACCAGGCAATCCTAG

Coding sequence (CDS)

ATGAATCGAAGAAACAGTAGAGAAGGAGGTGCGCCGAAGTTGGAGCTGAAACTGAACCTGTCGCCGCCGAGAGGCGGAGGAAACAGAGGAGTGGAATCGCCGAACCGGTCAGCCACCGTGTCGCCGACGTCGCCGCCGAGCTCATGTGTGTCGTCGGAGGCGGCGAGATCGTATTCGAACAGCCCTGAAACGGCGACGATGATGCTTGTGGGATGTCCACGTTGCTTGATGTACGTGATGCTGTCGGAACAAGACCCGAAATGTCCGAAATGCAAAAGCACTGTCCTTCTCGATGTTCTCCACGATAATACCGCCGTTAAAACCAGGCAATCCTAG

Protein sequence

MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS
Homology
[Close]
BLAST of CmoCh07G008630 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-32
Identity = 72/98 (73.47%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 11  APKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARS-----YSNSPETA 70
           +PKLELKLNLSPP     R V SP+RSAT SPTSPPSSCVSSE  +      YS SPET 
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 71  TMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDN 104
           +M+LVGCPRCLMYVMLSE DPKCPKCKSTVLLD LH+N
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]
BLAST of CmoCh07G008630 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-21
Identity = 63/110 (57.27%), Postives = 73/110 (66.36%), Query Frame = 0 

Query: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRG--VESPNRSATVSPTSPPSSCVSSEAARSY 60
           M+RRN      PKLEL+LNLSPP    ++   V SPNRS T S    PSSCVSSE   + 
Sbjct: 1   MSRRNK---NGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTS----PSSCVSSET--NQ 60

Query: 61  SNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKT 109
             +    +M+LVGCPRCLMYVMLS+ DPKCPKCKSTVLLD L +N    T
Sbjct: 61  EENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAAT 101

[Close]
BLAST of CmoCh07G008630 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 0 

Query: 14  LELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSNSPETATMMLVGCP 73
           L+LKLN+            SP+  +++   S  SS  S EA        E  +M++VGCP
Sbjct: 11  LDLKLNI------------SPSLDSSLLTESSSSSLCSEEAE---GGGGEAKSMVVVGCP 70

Query: 74  RCLMYVMLS-EQDPKCPKCKSTVLLDVLHDNTAVKT 109
            C+MY++ S E DP+CP+C S VLLD L  N + K+
Sbjct: 71  NCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]
BLAST of CmoCh07G008630 vs. ExPASy TrEMBL
Match: A0A6J1HG10 (uncharacterized protein LOC111463225 OS=Cucurbita moschata OX=3662 GN=LOC111463225 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 8.8e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 60
           MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN
Sbjct: 28  MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 87

Query: 61  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS
Sbjct: 88  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 138

[Close]
BLAST of CmoCh07G008630 vs. ExPASy TrEMBL
Match: A0A5A7SGG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00770 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41
Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 1   MNRRNSREGGA--PKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSY 60
           MNRRNS  GGA  PKLELKLNLSPPR   NRGVESP+RSATVSPTSPPSSCVSSE    Y
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPR--ANRGVESPSRSATVSPTSPPSSCVSSEEEMRY 60

Query: 61  SNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SNSPET +MMLVGCPRCLMYVMLSE+DPKCPKCKSTVLLDVLHDN AVKTR++
Sbjct: 61  SNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]
BLAST of CmoCh07G008630 vs. ExPASy TrEMBL
Match: A0A0A0KHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41
Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 1   MNRRNSREGGA--PKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSY 60
           MNRRNS  GGA  PKLELKLNLSPPR   NRGVESP+RSATVSPTSPPSSCVSSE    Y
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPR--ANRGVESPSRSATVSPTSPPSSCVSSEEEMRY 60

Query: 61  SNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SNSPET +MMLVGCPRCLMYVMLSE+DPKCPKCKSTVLLDVLHDN AVKTR++
Sbjct: 61  SNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]
BLAST of CmoCh07G008630 vs. ExPASy TrEMBL
Match: A0A1S3CHA8 (uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.6e-41
Identity = 94/113 (83.19%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 1   MNRRNSREGGA--PKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSY 60
           MNRRNS  GGA  PKLELKLNLSPPR   NRGVESP+RSATVSPTSPPSSCVSSE    Y
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPR--ANRGVESPSRSATVSPTSPPSSCVSSEEEMRY 60

Query: 61  SNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SNSPET +MMLVGCPRCLMYVMLSE+DPKCPKCKSTVLLDVLHDN AVKT ++
Sbjct: 61  SNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEKT 111

[Close]
BLAST of CmoCh07G008630 vs. ExPASy TrEMBL
Match: A0A6J1EGT8 (uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC111433248 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38
Identity = 93/120 (77.50%), Postives = 101/120 (84.17%), Query Frame = 0 

Query: 1   MNRRNSREGG----APKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAAR 60
           MNRRNS  GG    APKLELKLNLSPPR   NRGVESP+RSATVSPTSPPSSCVSSE   
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPR--ANRGVESPSRSATVSPTSPPSSCVSSEEEM 60

Query: 61  S-----YSNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           +     YS+SPE  +MMLVGCPRCLMYVMLSE+DPKCPKCKSTVLLDVLHDN+AVKTR++
Sbjct: 61  TVGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 118

[Close]
BLAST of CmoCh07G008630 vs. NCBI nr
Match: KAG6595164.1 (Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 60
           MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN
Sbjct: 28  MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 87

Query: 61  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS
Sbjct: 88  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 138

[Close]
BLAST of CmoCh07G008630 vs. NCBI nr
Match: XP_022962858.1 (uncharacterized protein LOC111463225 [Cucurbita moschata])

HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 60
           MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN
Sbjct: 28  MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 87

Query: 61  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS
Sbjct: 88  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 138

[Close]
BLAST of CmoCh07G008630 vs. NCBI nr
Match: KAG7027178.1 (hypothetical protein SDJN02_11189, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 60
           MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN
Sbjct: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 60

Query: 61  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS
Sbjct: 61  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 111

[Close]
BLAST of CmoCh07G008630 vs. NCBI nr
Match: XP_023518522.1 (uncharacterized protein LOC111781998 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.2 bits (552), Expect = 6.9e-53
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 60
           MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN
Sbjct: 28  MNRRNSREGGAPKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSN 87

Query: 61  SPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SPE ATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS
Sbjct: 88  SPEAATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 138

[Close]
BLAST of CmoCh07G008630 vs. NCBI nr
Match: XP_004143338.1 (uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacterized protein E6C27_scaffold541G00770 [Cucumis melo var. makuwa] >KGN48289.1 hypothetical protein Csa_003966 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 3.6e-41
Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 1   MNRRNSREGGA--PKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSY 60
           MNRRNS  GGA  PKLELKLNLSPPR   NRGVESP+RSATVSPTSPPSSCVSSE    Y
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPR--ANRGVESPSRSATVSPTSPPSSCVSSEEEMRY 60

Query: 61  SNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKTRQS 112
           SNSPET +MMLVGCPRCLMYVMLSE+DPKCPKCKSTVLLDVLHDN AVKTR++
Sbjct: 61  SNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]
BLAST of CmoCh07G008630 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 138.3 bits (347), Expect = 3.8e-33
Identity = 72/98 (73.47%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 11  APKLELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARS-----YSNSPETA 70
           +PKLELKLNLSPP     R V SP+RSAT SPTSPPSSCVSSE  +      YS SPET 
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 71  TMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDN 104
           +M+LVGCPRCLMYVMLSE DPKCPKCKSTVLLD LH+N
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]
BLAST of CmoCh07G008630 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-22
Identity = 63/110 (57.27%), Postives = 73/110 (66.36%), Query Frame = 0 

Query: 1   MNRRNSREGGAPKLELKLNLSPPRGGGNRG--VESPNRSATVSPTSPPSSCVSSEAARSY 60
           M+RRN      PKLEL+LNLSPP    ++   V SPNRS T S    PSSCVSSE   + 
Sbjct: 1   MSRRNK---NGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTS----PSSCVSSET--NQ 60

Query: 61  SNSPETATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVLHDNTAVKT 109
             +    +M+LVGCPRCLMYVMLS+ DPKCPKCKSTVLLD L +N    T
Sbjct: 61  EENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAAT 101

[Close]
BLAST of CmoCh07G008630 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-08
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 0 

Query: 14  LELKLNLSPPRGGGNRGVESPNRSATVSPTSPPSSCVSSEAARSYSNSPETATMMLVGCP 73
           L+LKLN+            SP+  +++   S  SS  S EA        E  +M++VGCP
Sbjct: 11  LDLKLNI------------SPSLDSSLLTESSSSSLCSEEAE---GGGGEAKSMVVVGCP 70

Query: 74  RCLMYVMLS-EQDPKCPKCKSTVLLDVLHDNTAVKT 109
            C+MY++ S E DP+CP+C S VLLD L  N + K+
Sbjct: 71  NCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]
BLAST of CmoCh07G008630 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.4e-05
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0 

Query: 36 RSATVSPTSPPSSC------VSSEAARSYSNSPETATMMLVGCPRCLMYVMLSEQDPKCP 95
          RS +   +S  +SC      V  E A S+ +  E   M+++GC  C+MYVM+ ++  +CP
Sbjct: 30 RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCP 89

Query: 96 KCKSTVLL 98
          KCK T L+
Sbjct: 90 KCKCTDLI 97

[Close]
BLAST of CmoCh07G008630 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 6.4e-04
Identity = 16/36 (44.44%), Postives = 24/36 (66.67%), Query Frame = 0 

Query: 65  ATMMLVGCPRCLMYVMLSEQDPKCPKCKSTVLLDVL 101
           A+ +  GCP CL YV +++ +PKCP+C S V L  +
Sbjct: 213 ASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAM 248

The following BLAST results are available for this feature:
BLAST of CmoCh07G008630 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FNI15.4e-3273.47Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1... [more]
Q9SRN41.5e-2157.27Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1... [more]
Q9FMS42.7e-0738.54Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of CmoCh07G008630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HG108.8e-54100.00uncharacterized protein LOC111463225 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
A0A5A7SGG81.7e-4184.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KHJ41.7e-4184.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1[more]
A0A1S3CHA86.6e-4183.19uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=... [more]
A0A6J1EGT81.4e-3877.50uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC1114332... [more]
BLAST of CmoCh07G008630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595164.11.8e-53100.00Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma ... [more]
XP_022962858.11.8e-53100.00uncharacterized protein LOC111463225 [Cucurbita moschata][more]
KAG7027178.11.8e-53100.00hypothetical protein SDJN02_11189, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023518522.16.9e-5399.10uncharacterized protein LOC111781998 [Cucurbita pepo subsp. pepo][more]
XP_004143338.13.6e-4184.07uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacter... [more]
BLAST of CmoCh07G008630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G06270.13.8e-3373.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G11600.11.0e-2257.27unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT5G22270.11.9e-0838.54unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G52561.13.4e-0536.76unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G16500.16.4e-0444.44unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..60
NoneNo IPR availablePANTHERPTHR33177PUTATIVE-RELATEDcoord: 1..110
NoneNo IPR availablePANTHERPTHR33177:SF40SUBFAMILY NOT NAMEDcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G008630.1CmoCh07G008630.1mRNA