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CmoCh07G008540 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGCTCAAAAGGCGATGAAAGTTCTGAGCGAGAGAGCCGCACTTGTCCGAGAGTCGCTGCAGAAGAGTCAGGTTGTAACGGAGAGCATGGTCTCCATTCTTGGCTCCTTCGATCACCGTCTCTCCGCTCTCGAAACAGCTATGCGGCCTACTCAGGTGCTTTTTCTTGCTCTGTTGCTTAGCTTGAAGAATTTTGAAATGCATCGAACAGATATGTTTAATGAGCGAATTTCTTCATATGATGCGTAATGTGTGTGAATTTGTGTCGTTTTTATGATCCTGCTGTCTATTTGATGTTTCTTATGAGATCTGCTCGATGATGCGATGGTACGTTTGATTGATTTTAAGGAAACATGACAATTTCTGTTATTGTAATCTTTGCTTGTGTTTGCTTTTCTTTTTTCTTTGGTTAATTATTTATACTTCGTGATCTTGTTTTTTGACGCGATAGATCAGAACTCATTCAATTCGGAGGGCGCATGAGAATATCGACAAGACATTGAAGTATGCAGAAAGTATGCTAGCTCATTTTGATCTTACACGCAAGGTTGATATCTCTTACCTTCTCATTCTTGCTTGCTTATTAATCATTTTGTGGAAAGAAGAGGCACGGCTTTTAATTTGCTGCTTGTTGTTTATATTATATGCGTCTTGTTCTGTAGCAAGTGTAGTAAGTTGAAATAAGATGCATCATCCCCAAGCCACGTTCGTAATTCATGCCTCGCTACTGATTGGATTTGATTTTGACTTAGGTTTTGTGTTGAATTTATTTTTGTTTTACTTGGCGGATTCTTGCGTTTTGGAAATTTATATGAAATTGGAATTATAGCAGTAGCATTTCAGGGTGACTTCACGTCTCAGATTGTTTGGGTAAGAGACTGAACGGTGATGAAATCTTAACAGTTTCCATTTGCATCATCTGGACAGTTCTCTTCACCCTACCCCTCTTTGATTCAATTTCACTAAGTCTACAATTTGGAAGCCCAAATCATACGACTAATATAATCACCTGGAGATAAGAAGATGCCATCATGCTAGAGGCACACGTTGGACGAAAACAGTAGGAACTTCTTTAGATCTTTATTGTTAACATGGTGGGACGCAAAAGATGTAATTGAAGTAGTTGTGCGTCCTTCTCTTGTTCACACGGAGCCATATATTTACCTTTGTCTGGTGCTGTAGGCTTGTTCTCCTCCGGCTTCATCCCAAACAGAATTGGAGAAAGATCAGTCTTTGTTTCTATTGCTTTATTTCTTTCTTATCATACTATAGTGGGTTGGCAGCTGCTGTGCCTGGTGATAAATCCTAA ATGGGGGCTCAAAAGGCGATGAAAGTTCTGAGCGAGAGAGCCGCACTTGTCCGAGAGTCGCTGCAGAAGAGTCAGGTTGTAACGGAGAGCATGGTCTCCATTCTTGGCTCCTTCGATCACCGTCTCTCCGCTCTCGAAACAGCTATGCGGCCTACTCAGATCAGAACTCATTCAATTCGGAGGGCGCATGAGAATATCGACAAGACATTGAAGTATGCAGAAAGTATGCTAGCTCATTTTGATCTTACACGCAAGGCTTGTTCTCCTCCGGCTTCATCCCAAACAGAATTGGAGAAAGATCATGGGTTGGCAGCTGCTGTGCCTGGTGATAAATCCTAA ATGGGGGCTCAAAAGGCGATGAAAGTTCTGAGCGAGAGAGCCGCACTTGTCCGAGAGTCGCTGCAGAAGAGTCAGGTTGTAACGGAGAGCATGGTCTCCATTCTTGGCTCCTTCGATCACCGTCTCTCCGCTCTCGAAACAGCTATGCGGCCTACTCAGATCAGAACTCATTCAATTCGGAGGGCGCATGAGAATATCGACAAGACATTGAAGTATGCAGAAAGTATGCTAGCTCATTTTGATCTTACACGCAAGGCTTGTTCTCCTCCGGCTTCATCCCAAACAGAATTGGAGAAAGATCATGGGTTGGCAGCTGCTGTGCCTGGTGATAAATCCTAA MGAQKAMKVLSERAALVRESLQKSQVVTESMVSILGSFDHRLSALETAMRPTQIRTHSIRRAHENIDKTLKYAESMLAHFDLTRKACSPPASSQTELEKDHGLAAAVPGDKS Homology
BLAST of CmoCh07G008540 vs. ExPASy Swiss-Prot
Match: Q9LZD3 (Exocyst complex component EXO70A1 OS=Arabidopsis thaliana OX=3702 GN=EXO70A1 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 6.4e-25 Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy Swiss-Prot
Match: Q9UPT5 (Exocyst complex component 7 OS=Homo sapiens OX=9606 GN=EXOC7 PE=1 SV=3) HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07 Identity = 27/74 (36.49%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy Swiss-Prot
Match: O54922 (Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07 Identity = 27/74 (36.49%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy Swiss-Prot
Match: O35250 (Exocyst complex component 7 OS=Mus musculus OX=10090 GN=Exoc7 PE=1 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 3.5e-07 Identity = 27/74 (36.49%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy TrEMBL
Match: A0A6J1HGZ8 (Exocyst subunit Exo70 family protein OS=Cucurbita moschata OX=3662 GN=LOC111463465 PE=3 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.9e-36 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy TrEMBL
Match: A0A6J1I9N6 (Exocyst subunit Exo70 family protein OS=Cucurbita maxima OX=3661 GN=LOC111471306 PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.4e-35 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy TrEMBL
Match: A0A5A7SGF5 (Exocyst subunit Exo70 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00650 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy TrEMBL
Match: A0A5D3C6C9 (Exocyst subunit Exo70 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001770 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of CmoCh07G008540 vs. ExPASy TrEMBL
Match: A0A1S3CHD2 (Exocyst subunit Exo70 family protein OS=Cucumis melo OX=3656 GN=LOC103500934 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of CmoCh07G008540 vs. NCBI nr
Match: XP_022963178.1 (exocyst complex component EXO70A1-like isoform X1 [Cucurbita moschata] >XP_022963179.1 exocyst complex component EXO70A1-like isoform X1 [Cucurbita moschata] >KAG7027172.1 Exocyst complex component EXO70A1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161.0 bits (406), Expect = 6.0e-36 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CmoCh07G008540 vs. NCBI nr
Match: KAG6595156.1 (Exocyst complex component EXO70A1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 161.0 bits (406), Expect = 6.0e-36 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CmoCh07G008540 vs. NCBI nr
Match: XP_022972800.1 (exocyst complex component EXO70A1-like isoform X1 [Cucurbita maxima] >XP_022972802.1 exocyst complex component EXO70A1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of CmoCh07G008540 vs. NCBI nr
Match: XP_023517471.1 (exocyst complex component EXO70A1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517472.1 exocyst complex component EXO70A1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.2 bits (391), Expect = 3.3e-34 Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0
BLAST of CmoCh07G008540 vs. NCBI nr
Match: XP_031742727.1 (exocyst complex component EXO70A1 [Cucumis sativus] >KGN48579.2 hypothetical protein Csa_004374 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 1.4e-29 Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of CmoCh07G008540 vs. TAIR 10
Match: AT5G52340.1 (exocyst subunit exo70 family protein A2 ) HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28 Identity = 63/86 (73.26%), Postives = 75/86 (87.21%), Query Frame = 0
BLAST of CmoCh07G008540 vs. TAIR 10
Match: AT5G03540.1 (exocyst subunit exo70 family protein A1 ) HSP 1 Score: 114.8 bits (286), Expect = 4.6e-26 Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 0
BLAST of CmoCh07G008540 vs. TAIR 10
Match: AT5G03540.3 (exocyst subunit exo70 family protein A1 ) HSP 1 Score: 114.8 bits (286), Expect = 4.6e-26 Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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