CmoCh07G008420 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G008420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	50S ribosomal protein L21
Location	Cmo_Chr07: 3957706 .. 3962463 (+)
RNA-Seq Expression	CmoCh07G008420
Synteny	CmoCh07G008420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGTATTTTTTTTAAAAAAAATTAATAATATGTGTAATGATGTGGAGGGGAGGACGAAGACAAGAGCATTAAATAATTTGCGTAATGGATCTTCCCAGGTGCTATGTCCACGTGAAGCTAAGTCGTCAGCCTAGGAAAAGTTTGGTGTGACAATTACACATCTGCCCCCACTTAGATTTATTGACTAATTTAGAACCCAATAATTAATTTTTATTTATTTATTTATTTATTGAGATGGTAAATACAATACAAGTGCCTTTCAATAATTTATTAGCCTTGGGTTGGGGTGGGGTTTTGTGGAACATAAGAAAGGGAACATTATTTCAACCCAACATTTAATAATATATCAATAAATTGTTTCTTTGTCTTCACTTTATTTATTATTATTTCTTTTTTATTCTGAACCATGTTCAAATTGACATAAAATAATTAAATAATAATCTATTTAAATGTAAGATTAATTTTAATATAATTATTATTATTATTTTTTTTAAATTTGACTAATAATTCAAAAAATATATGATTTGATATACATGAACCCAATATGGGCTTAAACGTTGGGCTTTTAAACTGGGCTCAAAGCCTCTATTTGGGCTTTTTAAATGGGCTTAAAGCCTTTATCGTTATTAATGGATAGCCCATGGATCCAGACCATCTTGAACCTTTCCTAACACCAGCTTGTGAGCCAAGTACAACCTAACATGAGTATAATACAATATTTAATTTTATTAGTTTTTTTTTTAATTTAAAAATCTAAATTGGAAATTTCCACTCCAATCTCCACAAAAATTAAATAGAAACTAAACAAGAACTCGAGACGTAACTTTTAAATTTTATATTTAATATATTTTAATTTTTAATTTAGTATCTAATAAATTTAAAAGTTTATACATAAAATTAAAATTTATGATTTAAAGAACTTTTAGGACGGTGGTAACAATTTATCAACATTTTTTATCATTAAAAATTTATTAGACGTGGTTAAATTATAAATTTAATTTTTTTTTTTTAGTTTTATATTTAATAAATTTTAGAATTTTAAATGTTTAATAAATTTATAAAATTTAAAATAATAATAATAAAAAAAAAGCTCTACAAAATAACTCAATTAAAAGGTCAGTAAATTTATAATTTTAAGAATTTTTGAAAGTAAGACCGTCGTTGAATCCAAAAACCCTCACTCACAGGTCCCAAAACCCTCACCTCCAGCTATCGTCTCCACCACCGACGGCCATAATGTTGCACCTGTGGGCTTCCTCCTCCGTCCTGCAAGAACCGTCGACTATCCTCTGTAAGTTTCTTGAATTTTCAAAAAATCTCTATCTCTCACTGTCTTACTTTGAAAATGATCATTTGGTTCTGGAAAATTATGTGTAAATCTTGTTCCTCGTCTTTTGCTGTGGTTTTGAGATTGGAGGTGGGTTAGATCAGATTTCTCTTTGCTCTAATCTGAGTTTCGTTGATTTGAATTGATCCTCTATCCTTGTTGCGGGTTGTGCGAGTTGACATTCTTCCTTTTCTGTCTCCATGTTTCGAGCTCGCCTTGTGTGTATTAAGCCGCCTCACCCTTTGGTAATTAGGGTTTGATTTCATTATTTTGCATGTCCTTGCCGCATTGAAGCATTTCTACTCCTTGTTGCCTTGCTGTCGCCGCTCGCCGCGCGAATGATGTTAGAGCAGAGAGGAAGAGCGATGTTGCTATTGCGGAGAAGAAGAAAGCGGGAAAGTTGAGGATTGATGAACTTGACCAATAAACCCGAACCAGAGTGAATCAAACTGCCTGAGTTTCTAAATAATGTTTGGATTGATCCCGCTTATCCATATGATCAAGCCGACGATCATTTTTTATATTATAACAAAAAACTGAATTGAATCTGGATTGCAAAAACTTCTATGTTTTCAACATGGATAAGAGTGTTAGACTTCTAGGAAACGTTGGTTTAGTTATGTTTTTATTTTCTGTCTGCAGATTGAGAAGGTTAGAAGATTGATGCAGCTTGTGTAGAGTAGTGAACTATAAGTCAAAGGCCATAACGACCACCGCCATGGCAAACAGACGGTGTGTACAAGTACTAACTCGTCATGCCTCGGCCATTTTTTCTGGAAAGCCATATATCCACTCGCTGAAAATCACATCTTCCTTCCTCTACCAGAATTACCATACACGTGCCTCTACATCAACCTATCTTTGTACTAAAACTGATCCTTTGTGTAAGTGCTGGCCACACTCCCAATATCTCTCATCTGATAGTCGTAATGGCAATGACGATGATGATACTGAAGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGCATATGATAGTAGTGAGGATGATGGTATTTCGGGGTTGAGTAGGGGTATGCAGAAGGAGTATACAAAGGAGGAGAAGGAGGCAGAAGCGGCTGATATTGGATATAAAGTAGTTGGGCCACTTGATCGATCTGATGGCGTTTTCAAGGGTTATGAGCCTGTTTTTGCTGTTGTTCAGGTACAAACTTGTGGCATGGCTTCATGAGTTTTTTGAATTTATGCACTCTTTTCTTTTGGCTGTTTCTGTAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGACAGTATTTTTACCGAAAGATTAAAATTCTGCGATGTGAATGACAAGGTTCGTAACTCCTATTCCATTTTCCATTGTGGATGTTTCAGTTATCGTAATTTCTTTTTTTCTTCTTTTTTTTAAAACTTGCATCCTAGCCTTCGTCCATGTTCTACATGGTCTCCCGCTTGAATGAGCCCTCCATCTGTTTTGACACTGCCTCTTTAAATGGCGTTGAACACGGAAGCAATTTTTGGGACCTAGAATTAAAATGTTGTTTGATTTAAGACTGTACTCATATTTTTTATATTCTGCTATTGTTTCCAGGTTGTAATTAACTAAGCTAAAGTTTGTGGTACTTCTATGATGTTTGATGGTTACAAAGATTCGACTTAAACATTAATTTGATAGGCTGCAGAGCAGTTTTTGGGTGAATTAGTATAGAAGAGCCCTTTTTTGGGACAGTGTGTGAAAGCTTAGAAAGGCTTCTAAAAAGCAACTGTTTTACATACATGAAAAGTTGCACCCTTCAGGTTGTCATAGACGAGGCTAAATTAAGTAGTCATGTACTTTGTTTCATGAGAAGTATCGCTTCAAGCAAATTAAAGAACGAGGAAAATATGAAATTTATCTTTTGGTAGCTTTTATTTAAGTTATTGTTACTCACTTGTGAGCACAAGAGGATCTTTTCTGCAATTTCTATTGCCCCATTTTCCTTGTCAGACTTGAATGCGCTTTTGTAGATTTTCTCATGTTTGTTGTTATATCTTGCCCAGTTTAGGATTCTGATTATGTGTTGAATTTTTTAACCTTTTCTGTACTTCATCTTGAGCAAGCTTTAATGAATTTTCTTTTTTAATAAATGGATTTATCTTTTGCAGTTGATATTGAATAGGGTCCTCATGCTTGGCTCAAGTAGCCAAACGATTGTAGGCAGGCCAACAATCCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGTAAGCGTGACGGCAAAACTATTTGCTTTTTGTTGTTAATGCATTATATTATAAACAACTTTACTGTTGTGTTCTTTCTGATGTGCATTGTTCTCTAGTGATTCTCGTGGACCATTGCAATGCATTTTTTAAGGACTAGTTCTCTAGTTCTTTATGCGCTTTATTAAATATACTTCTAGTCTTAGCCGCATTTGGGAACTTATACATTAAATGGATTTAGACAACGCAATTGATAAAATAGGAAGATCCAATTTGTTAGTCAGGGGGAAAGATTTACATTCTAGTTTTATTATATCCATCAGGTTAGAAGAAAATAATAAAATCTGGAGACTTTACAATGTTCAGAAGAATTCAAAAGGCAATTTCTTCGAGCAATTATTGCTTAAAAAATTTGTGAATGACAGAGGGCTTTCGTATATGAATTAGCCGAGTTGGCAATAAGTGTAATATGTTGCAGTACTTTATTTTCTATGATCATATCATATTAACTGTGTTGCTCTGCGACTCTGGTTGGTCTGCTGAGTGTAAATTTTTCTTTCCTGGCTCTCTTTATTTGTTTCAAAGTCCCAACGACATATTTCTTGAAAGTCCAATTCTCAAATTTGTGTTCCAATTCGTAAGATCTGAATGCTTTTTCCTCCTTTTCTGAAGGCCTTAGATGCAAAAATAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCCGAACCAAAGGACACCGCCAGGTATATCCTATTCCTATCCAGACTTTCCAGAAAGAAGTAAAAAGTTTATTATCCTAGTTTTCTGATGATCCTTTCTGGCAACATTTTATATCTTAGGAATTAACAAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAACAGCTGATAAGAAGCAAGAAAAATTTGCAGTAGCTGCTTAGAAGAAGGTTCCATGATTCTAACTAACTGGAACTGCTAAATGGGTGTAGCTTTTTCTGATGTCATATGATATACTATACTTGATTCTAATTCTTTGATAGTGCGTCTTAGGCATGTTTTGTAGGAATGGCACTTTACTATGATTCCCATCCTTTTTGTTCCTTGACCTTTTCTATTTAAAAAATTGTTGTCATCATACATTTGTCAATAAGTTGAAATTGCATCAAATAAGATTATTCCATAATTATGTATGGTTCA

mRNA sequence

ATGGTCCCAAAACCCTCACCTCCAGCTATCGTCTCCACCACCGACGGCCATAATGTTGCACCTGTGGGCTTCCTCCTCCGTCCTGCAAGAACCGTCGACTATCCTCTCATTTCTACTCCTTGTTGCCTTGCTGTCGCCGCTCGCCGCGCGAATGATGTTAGAGCAGAGAGGAAGAGCGATGTTGCTATTGCGGAGAAGAAGAAAGCGGGAAACTTGTGTAGAGTAGTGAACTATAAGTCAAAGGCCATAACGACCACCGCCATGGCAAACAGACGGTGTGTACAAGTACTAACTCGTCATGCCTCGGCCATTTTTTCTGGAAAGCCATATATCCACTCGCTGAAAATCACATCTTCCTTCCTCTACCAGAATTACCATACACGTGCCTCTACATCAACCTATCTTTGTACTAAAACTGATCCTTTGTGTAAGTGCTGGCCACACTCCCAATATCTCTCATCTGATAGTCGTAATGGCAATGACGATGATGATACTGAAGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGCATATGATAGTAGTGAGGATGATGGTATTTCGGGGTTGAGTAGGGGTATGCAGAAGGAGTATACAAAGGAGGAGAAGGAGGCAGAAGCGGCTGATATTGGATATAAAGTAGTTGGGCCACTTGATCGATCTGATGGCGTTTTCAAGGGTTATGAGCCTGTTTTTGCTGTTGTTCAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGACAGTATTTTTACCGAAAGATTAAAATTCTGCGATGTGAATGACAAGTTGATATTGAATAGGGTCCTCATGCTTGGCTCAAGTAGCCAAACGATTGTAGGCAGGCCAACAATCCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCCTTAGATGCAAAAATAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCCGAACCAAAGGACACCGCCAGGAATTAACAAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAACAGCTGATAAGAAGCAAGAAAAATTTGCAGTAGCTGCTTAGAAGAAGGTTCCATGATTCTAACTAACTGGAACTGCTAAATGGGTGTAGCTTTTTCTGATGTCATATGATATACTATACTTGATTCTAATTCTTTGATAGTGCGTCTTAGGCATGTTTTGTAGGAATGGCACTTTACTATGATTCCCATCCTTTTTGTTCCTTGACCTTTTCTATTTAAAAAATTGTTGTCATCATACATTTGTCAATAAGTTGAAATTGCATCAAATAAGATTATTCCATAATTATGTATGGTTCA

Coding sequence (CDS)

ATGGTCCCAAAACCCTCACCTCCAGCTATCGTCTCCACCACCGACGGCCATAATGTTGCACCTGTGGGCTTCCTCCTCCGTCCTGCAAGAACCGTCGACTATCCTCTCATTTCTACTCCTTGTTGCCTTGCTGTCGCCGCTCGCCGCGCGAATGATGTTAGAGCAGAGAGGAAGAGCGATGTTGCTATTGCGGAGAAGAAGAAAGCGGGAAACTTGTGTAGAGTAGTGAACTATAAGTCAAAGGCCATAACGACCACCGCCATGGCAAACAGACGGTGTGTACAAGTACTAACTCGTCATGCCTCGGCCATTTTTTCTGGAAAGCCATATATCCACTCGCTGAAAATCACATCTTCCTTCCTCTACCAGAATTACCATACACGTGCCTCTACATCAACCTATCTTTGTACTAAAACTGATCCTTTGTGTAAGTGCTGGCCACACTCCCAATATCTCTCATCTGATAGTCGTAATGGCAATGACGATGATGATACTGAAGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGCATATGATAGTAGTGAGGATGATGGTATTTCGGGGTTGAGTAGGGGTATGCAGAAGGAGTATACAAAGGAGGAGAAGGAGGCAGAAGCGGCTGATATTGGATATAAAGTAGTTGGGCCACTTGATCGATCTGATGGCGTTTTCAAGGGTTATGAGCCTGTTTTTGCTGTTGTTCAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGACAGTATTTTTACCGAAAGATTAAAATTCTGCGATGTGAATGACAAGTTGATATTGAATAGGGTCCTCATGCTTGGCTCAAGTAGCCAAACGATTGTAGGCAGGCCAACAATCCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCCTTAGATGCAAAAATAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCCGAACCAAAGGACACCGCCAGGAATTAACAAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAACAGCTGATAAGAAGCAAGAAAAATTTGCAGTAGCTGCTTAG

Protein sequence

MVPKPSPPAIVSTTDGHNVAPVGFLLRPARTVDYPLISTPCCLAVAARRANDVRAERKSDVAIAEKKKAGNLCRVVNYKSKAITTTAMANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWPHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTKLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA

Homology

[Close]

BLAST of CmoCh07G008420 vs. ExPASy Swiss-Prot
Match: Q8L9A0 (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL21M PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.6e-63
Identity = 150/282 (53.19%), Postives = 198/282 (70.21%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYH-TRASTSTYL----CTKTDPL 147
           MA+ RC + L+R A+ +FS    I+  +  SSF    +  T  S  T +     T+  P 
Sbjct: 1   MASLRCFRELSRRATTVFS----INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPW 60

Query: 148 CKCWPHSQ--YLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYT 207
              W  SQ    SS++++ ++D+++ E ED+DE+E E+  DS++ +        +++EY+
Sbjct: 61  YSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADME--------VEREYS 120

Query: 208 KEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCD 267
             EK  EA +IGYKV+GPL  S+ +FK YEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD
Sbjct: 121 PAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCD 180

Query: 268 VNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKG 327
           +NDKL L +VL+LGS+SQTI+GRP +P A V AVVEEHALD K++IFKKKRRKNYRRT+G
Sbjct: 181 INDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRG 240

Query: 328 HRQELTKLRIIDIQGIDKPEN--IGKPSKTADKKQEKFAVAA 361
           HRQELTKLRI DIQGI+KPE   + KPSK A  +Q K  + A
Sbjct: 241 HRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

[Close]

BLAST of CmoCh07G008420 vs. ExPASy Swiss-Prot
Match: P24613 (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL21 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.6e-24
Identity = 55/108 (50.93%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 230 EPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLMLGSSSQTIVGRPTIPSA 289
           E +FAVV IGS Q+ V  G  I+T+RLK   VNDK++LN+VL++G+ + T +G P + +A
Sbjct: 121 EEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNA 180

Query: 290 VVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTKLRIIDIQGID 338
            V AVVEE  LD K+I+FK K++KNYRR  GHRQ +T+++I  I G +
Sbjct: 181 AVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYE 228

[Close]

BLAST of CmoCh07G008420 vs. ExPASy Swiss-Prot
Match: P51412 (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL21 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-21
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 203 EKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 262
           E E E  DI   VV  +          E +FAV+ +G  Q+ V  G  ++T+RLK  +V+
Sbjct: 71  EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVD 130

Query: 263 DKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHR 322
           D+++LN+VL++G+ + T +G+P + +A V AVVE   L+ K+++FK K +K YRR  GHR
Sbjct: 131 DQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHR 190

Query: 323 QELTKLRIIDIQGIDK 339
           Q  T++RI  I G ++
Sbjct: 191 QPNTRIRITGITGYEE 206

[Close]

BLAST of CmoCh07G008420 vs. ExPASy Swiss-Prot
Match: A8GYB4 (50S ribosomal protein L21 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=rplU PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17
Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 232 VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLMLGS-SSQTIVGRPTIPSAV 291
           +FAV++ G  Q+KV     I  E+++  ++  K+ LN+VLM+G  S  + +G P +  AV
Sbjct: 1   MFAVIKAGGKQYKVDQNSVIKVEKIE-GELGSKIQLNQVLMMGEYSKPSFIGTPLVKGAV 60

Query: 292 VQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTKLRIIDI 334
           V A +     D KII+FKKKRRKNYRR  GHRQELT+L+I+DI
Sbjct: 61  VTAEITNQLRDNKIIVFKKKRRKNYRRKAGHRQELTELKILDI 102

[Close]

BLAST of CmoCh07G008420 vs. ExPASy Swiss-Prot
Match: Q1RGM7 (50S ribosomal protein L21 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rplU PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17
Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 232 VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLMLGS-SSQTIVGRPTIPSAV 291
           +FAV++ G  Q+KV     I  E+++  ++  K+ LN+VLM+G  S  + +G P +  AV
Sbjct: 1   MFAVIKAGGKQYKVDQNSVIKVEKIE-GELGSKIQLNQVLMMGEYSKPSFIGTPLVKGAV 60

Query: 292 VQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTKLRIIDI 334
           V A +     D KII+FKKKRRKNYRR  GHRQELT+L+I+DI
Sbjct: 61  VTAEITNQLRDNKIIVFKKKRRKNYRRKAGHRQELTELKILDI 102

[Close]

BLAST of CmoCh07G008420 vs. ExPASy TrEMBL
Match: A0A6J1HFL5 (50S ribosomal protein L21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111463511 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 4.2e-145
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 147
           MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP
Sbjct: 1   MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 60

Query: 148 HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 207
           HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE
Sbjct: 61  HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 120

Query: 208 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 267
           AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL
Sbjct: 121 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 180

Query: 268 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 327
           NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK
Sbjct: 181 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 240

Query: 328 LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA
Sbjct: 241 LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 273

[Close]

BLAST of CmoCh07G008420 vs. ExPASy TrEMBL
Match: A0A6J1KVI7 (50S ribosomal protein L21, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496817 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 5.1e-135
Identity = 259/273 (94.87%), Postives = 261/273 (95.60%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 147
           MANRRCVQVLTRHASAIF+GKPYIHSLKITSSFLYQNYHTRASTSTYL TKTD LCKCW 
Sbjct: 1   MANRRCVQVLTRHASAIFTGKPYIHSLKITSSFLYQNYHTRASTSTYLFTKTDTLCKCWS 60

Query: 148 HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 207
           HSQYLSSDSRNGNDDDDTE      EDEDEEAYDSSEDD ISGLSRGMQKEYTKEEKEAE
Sbjct: 61  HSQYLSSDSRNGNDDDDTE------EDEDEEAYDSSEDDVISGLSRGMQKEYTKEEKEAE 120

Query: 208 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 267
           AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL L
Sbjct: 121 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLTL 180

Query: 268 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 327
           NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELTK
Sbjct: 181 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTK 240

Query: 328 LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           LRIIDIQGIDKPENIGKPSKTADKKQEK AVAA
Sbjct: 241 LRIIDIQGIDKPENIGKPSKTADKKQEKVAVAA 267

[Close]

BLAST of CmoCh07G008420 vs. ExPASy TrEMBL
Match: A0A5A7T510 (50S ribosomal protein L21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00170 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.9e-113
Identity = 227/284 (79.93%), Postives = 248/284 (87.32%), Query Frame = 0


Query: 78  YKSKAITTTAMANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCT 137
           Y  KAI  T MANRRC+QVLTRHASAI S KPYIH+LKI  S L++N+HT AS S  L  
Sbjct: 38  YIDKAIRITTMANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLSNCLSA 97

Query: 138 KTDP-LCKCWPHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQ 197
           KTDP LC  W H++YLSSDSRNGN+DD T   EDEDEDED+EAYD SEDDGIS  SR M+
Sbjct: 98  KTDPSLCTYWSHTRYLSSDSRNGNEDDFT---EDEDEDEDDEAYD-SEDDGISTSSRVMK 157

Query: 198 KEYTKEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERL 257
           KEYTKEE EAEAA IGYKV+GPLD+S+GVFK YEP FAVVQIGSHQFKVSNGDSIFTERL
Sbjct: 158 KEYTKEEMEAEAAAIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERL 217

Query: 258 KFCDVNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYR 317
           KFCDVNDKLILN+VL++GSSSQTIVGRPT+PSA VQAVVEEHALDAK+IIFKKKRRKNYR
Sbjct: 218 KFCDVNDKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIFKKKRRKNYR 277

Query: 318 RTKGHRQELTKLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           RTKGHRQELTKLRI+DIQGI+KPENIGKPSK  DKKQE+ AVAA
Sbjct: 278 RTKGHRQELTKLRIVDIQGIEKPENIGKPSKVTDKKQEQVAVAA 317

[Close]

BLAST of CmoCh07G008420 vs. ExPASy TrEMBL
Match: A0A1S3CMX4 (50S ribosomal protein L21, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502620 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 7.2e-113
Identity = 225/281 (80.07%), Postives = 247/281 (87.90%), Query Frame = 0


Query: 81  KAITTTAMANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTD 140
           KAI  T MANRRC+QVLTRHASAI S KPYIH+LKI  S L++N+HT AS S  L  KTD
Sbjct: 3   KAIRITTMANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLSNCLSAKTD 62

Query: 141 P-LCKCWPHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEY 200
           P LC  W H++YLSSDSRNGN+DD T   EDEDEDED+EAYD SEDDGIS  SR M+KEY
Sbjct: 63  PSLCTYWSHTRYLSSDSRNGNEDDFT---EDEDEDEDDEAYD-SEDDGISTSSRVMKKEY 122

Query: 201 TKEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFC 260
           TKEE EAEAA IGYKV+GPLD+S+G+FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC
Sbjct: 123 TKEEMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFC 182

Query: 261 DVNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTK 320
           DVNDKLILN+VL++GSSSQTIVGRPT+PSA VQAVVEEHALDAK+IIFKKKRRKNYRRTK
Sbjct: 183 DVNDKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIFKKKRRKNYRRTK 242

Query: 321 GHRQELTKLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           GHRQELTKLRI+DIQGI+KPENIGKPSK  DKKQE+ AVAA
Sbjct: 243 GHRQELTKLRIVDIQGIEKPENIGKPSKVTDKKQEQVAVAA 279

[Close]

BLAST of CmoCh07G008420 vs. ExPASy TrEMBL
Match: E5GBZ0 (50S ribosomal protein l21 mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 7.2e-113
Identity = 225/281 (80.07%), Postives = 247/281 (87.90%), Query Frame = 0


Query: 81  KAITTTAMANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTD 140
           KAI  T MANRRC+QVLTRHASAI S KPYIH+LKI  S L++N+HT AS S  L  KTD
Sbjct: 3   KAIRITTMANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLSNCLSAKTD 62

Query: 141 P-LCKCWPHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEY 200
           P LC  W H++YLSSDSRNGN+DD T   EDEDEDED+EAYD SEDDGIS  SR M+KEY
Sbjct: 63  PSLCTYWSHTRYLSSDSRNGNEDDFT---EDEDEDEDDEAYD-SEDDGISTSSRVMKKEY 122

Query: 201 TKEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFC 260
           TKEE EAEAA IGYKV+GPLD+S+G+FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC
Sbjct: 123 TKEEMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFC 182

Query: 261 DVNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTK 320
           DVNDKLILN+VL++GSSSQTIVGRPT+PSA VQAVVEEHALDAK+IIFKKKRRKNYRRTK
Sbjct: 183 DVNDKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIFKKKRRKNYRRTK 242

Query: 321 GHRQELTKLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           GHRQELTKLRI+DIQGI+KPENIGKPSK  DKKQE+ AVAA
Sbjct: 243 GHRQELTKLRIVDIQGIEKPENIGKPSKVTDKKQEQVAVAA 279

[Close]

BLAST of CmoCh07G008420 vs. NCBI nr
Match: XP_022963236.1 (50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata] >XP_022963238.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata] >XP_022963239.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 524.2 bits (1349), Expect = 8.6e-145
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 147
           MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP
Sbjct: 1   MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 60

Query: 148 HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 207
           HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE
Sbjct: 61  HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 120

Query: 208 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 267
           AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL
Sbjct: 121 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 180

Query: 268 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 327
           NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK
Sbjct: 181 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 240

Query: 328 LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA
Sbjct: 241 LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 273

[Close]

BLAST of CmoCh07G008420 vs. NCBI nr
Match: XP_023518436.1 (50S ribosomal protein L21, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023518437.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023518438.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023518439.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 506.1 bits (1302), Expect = 2.4e-139
Identity = 268/274 (97.81%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNY-HTRASTSTYLCTKTDPLCKCW 147
           MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNY HTRASTSTYL TKTDPLCKCW
Sbjct: 1   MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHHTRASTSTYLFTKTDPLCKCW 60

Query: 148 PHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEA 207
            HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEA
Sbjct: 61  SHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEA 120

Query: 208 EAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 267
           EAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI
Sbjct: 121 EAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 180

Query: 268 LNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELT 327
           LNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELT
Sbjct: 181 LNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELT 240

Query: 328 KLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           KLRIIDIQGIDKPENIGK SKTADKKQEK AVAA
Sbjct: 241 KLRIIDIQGIDKPENIGKASKTADKKQEKVAVAA 274

[Close]

BLAST of CmoCh07G008420 vs. NCBI nr
Match: KAG7027159.1 (50S ribosomal protein L21, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 505.8 bits (1301), Expect = 3.2e-139
Identity = 265/273 (97.07%), Postives = 266/273 (97.44%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 147
           MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLY NYHTRASTSTYLCTKTDPLCKCW 
Sbjct: 1   MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYHNYHTRASTSTYLCTKTDPLCKCWS 60

Query: 148 HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 207
           HSQYLSSDSRNGNDDDDTE    EDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE
Sbjct: 61  HSQYLSSDSRNGNDDDDTE----EDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 120

Query: 208 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 267
           AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL
Sbjct: 121 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 180

Query: 268 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 327
           NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELTK
Sbjct: 181 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTK 240

Query: 328 LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           LRIIDIQGIDKPENIGKPSKTADKKQEK AVAA
Sbjct: 241 LRIIDIQGIDKPENIGKPSKTADKKQEKVAVAA 269

[Close]

BLAST of CmoCh07G008420 vs. NCBI nr
Match: XP_023003105.1 (50S ribosomal protein L21, mitochondrial-like [Cucurbita maxima] >XP_023003106.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita maxima] >XP_023003107.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita maxima] >XP_023003108.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 490.7 bits (1262), Expect = 1.1e-134
Identity = 259/273 (94.87%), Postives = 261/273 (95.60%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 147
           MANRRCVQVLTRHASAIF+GKPYIHSLKITSSFLYQNYHTRASTSTYL TKTD LCKCW 
Sbjct: 1   MANRRCVQVLTRHASAIFTGKPYIHSLKITSSFLYQNYHTRASTSTYLFTKTDTLCKCWS 60

Query: 148 HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 207
           HSQYLSSDSRNGNDDDDTE      EDEDEEAYDSSEDD ISGLSRGMQKEYTKEEKEAE
Sbjct: 61  HSQYLSSDSRNGNDDDDTE------EDEDEEAYDSSEDDVISGLSRGMQKEYTKEEKEAE 120

Query: 208 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 267
           AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL L
Sbjct: 121 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLTL 180

Query: 268 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 327
           NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELTK
Sbjct: 181 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTK 240

Query: 328 LRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           LRIIDIQGIDKPENIGKPSKTADKKQEK AVAA
Sbjct: 241 LRIIDIQGIDKPENIGKPSKTADKKQEKVAVAA 267

[Close]

BLAST of CmoCh07G008420 vs. NCBI nr
Match: XP_038886741.1 (50S ribosomal protein L21, mitochondrial [Benincasa hispida])

HSP 1 Score: 425.2 bits (1092), Expect = 5.4e-115
Identity = 231/274 (84.31%), Postives = 244/274 (89.05%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDP-LCKCW 147
           MANRRC+QVLTRHAS IF  KPYIH LKI  SFL QN+HT AS S YL TK DP LC   
Sbjct: 1   MANRRCLQVLTRHASTIFFTKPYIHPLKIAPSFLSQNFHTHASISNYLSTKIDPSLCTYG 60

Query: 148 PHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEA 207
            H++YLSSDSRNGN+DD T   EDEDEDED+EAYDSSEDDGIS  SRGMQKEYTKEEKEA
Sbjct: 61  SHTRYLSSDSRNGNEDDFT---EDEDEDEDDEAYDSSEDDGISVSSRGMQKEYTKEEKEA 120

Query: 208 EAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 267
           EAA IGY VVGPLD+S GVFK YEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI
Sbjct: 121 EAAAIGYTVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 180

Query: 268 LNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELT 327
           LN+VL+LGSSSQTIVGRPT+PSAVVQAVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELT
Sbjct: 181 LNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELT 240

Query: 328 KLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           KLRIIDIQG+DKPENIGKPSK A KKQE+ AVAA
Sbjct: 241 KLRIIDIQGVDKPENIGKPSKVAGKKQEQVAVAA 271

[Close]

BLAST of CmoCh07G008420 vs. TAIR 10
Match: AT4G30930.1 (Ribosomal protein L21 )

HSP 1 Score: 242.7 bits (618), Expect = 4.7e-64
Identity = 150/282 (53.19%), Postives = 198/282 (70.21%), Query Frame = 0


Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYH-TRASTSTYL----CTKTDPL 147
           MA+ RC + L+R A+ +FS    I+  +  SSF    +  T  S  T +     T+  P 
Sbjct: 1   MASLRCFRELSRRATTVFS----INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPW 60

Query: 148 CKCWPHSQ--YLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYT 207
              W  SQ    SS++++ ++D+++ E ED+DE+E E+  DS++ +        +++EY+
Sbjct: 61  YSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADME--------VEREYS 120

Query: 208 KEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCD 267
             EK  EA +IGYKV+GPL  S+ +FK YEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD
Sbjct: 121 PAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCD 180

Query: 268 VNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKG 327
           +NDKL L +VL+LGS+SQTI+GRP +P A V AVVEEHALD K++IFKKKRRKNYRRT+G
Sbjct: 181 INDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRG 240

Query: 328 HRQELTKLRIIDIQGIDKPEN--IGKPSKTADKKQEKFAVAA 361
           HRQELTKLRI DIQGI+KPE   + KPSK A  +Q K  + A
Sbjct: 241 HRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

[Close]

BLAST of CmoCh07G008420 vs. TAIR 10
Match: AT1G35680.1 (Ribosomal protein L21 )

HSP 1 Score: 105.5 bits (262), Expect = 8.9e-23
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 203 EKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 262
           E E E  DI   VV  +          E +FAV+ +G  Q+ V  G  ++T+RLK  +V+
Sbjct: 71  EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVD 130

Query: 263 DKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHR 322
           D+++LN+VL++G+ + T +G+P + +A V AVVE   L+ K+++FK K +K YRR  GHR
Sbjct: 131 DQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHR 190

Query: 323 QELTKLRIIDIQGIDK 339
           Q  T++RI  I G ++
Sbjct: 191 QPNTRIRITGITGYEE 206

The following BLAST results are available for this feature:

BLAST of CmoCh07G008420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9A0	6.6e-63	53.19	50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL2...	[more]
P24613	4.6e-24	50.93	50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL21 P...	[more]
P51412	1.3e-21	38.97	50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL2...	[more]
A8GYB4	1.9e-17	47.57	50S ribosomal protein L21 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=...	[more]
Q1RGM7	1.9e-17	47.57	50S ribosomal protein L21 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rp...	[more]

BLAST of CmoCh07G008420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFL5	4.2e-145	100.00	50S ribosomal protein L21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KVI7	5.1e-135	94.87	50S ribosomal protein L21, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5A7T510	1.9e-113	79.93	50S ribosomal protein L21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3CMX4	7.2e-113	80.07	50S ribosomal protein L21, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502620...	[more]
E5GBZ0	7.2e-113	80.07	50S ribosomal protein l21 mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE...	[more]

BLAST of CmoCh07G008420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963236.1	8.6e-145	100.00	50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata] >XP_022963238...	[more]
XP_023518436.1	2.4e-139	97.81	50S ribosomal protein L21, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_0...	[more]
KAG7027159.1	3.2e-139	97.07	50S ribosomal protein L21, mitochondrial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023003105.1	1.1e-134	94.87	50S ribosomal protein L21, mitochondrial-like [Cucurbita maxima] >XP_023003106.1...	[more]
XP_038886741.1	5.4e-115	84.31	50S ribosomal protein L21, mitochondrial [Benincasa hispida]	[more]

BLAST of CmoCh07G008420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30930.1	4.7e-64	53.19	Ribosomal protein L21	[more]
AT1G35680.1	8.9e-23	38.97	Ribosomal protein L21	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028909	Ribosomal protein L21-like	PFAM	PF00829	Ribosomal_L21p	coord: 233..333 e-value: 4.6E-31 score: 107.0
IPR028909	Ribosomal protein L21-like	PANTHER	PTHR21349	50S RIBOSOMAL PROTEIN L21	coord: 88..354
IPR001787	Ribosomal protein L21	TIGRFAM	TIGR00061	TIGR00061	coord: 233..333 e-value: 2.2E-25 score: 86.9
IPR001787	Ribosomal protein L21	HAMAP	MF_01363	Ribosomal_L21	coord: 232..335 score: 22.021894
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..184
None	No IPR available	PANTHER	PTHR21349:SF5	BNAA08G12830D PROTEIN	coord: 88..354
IPR018258	Ribosomal protein L21, conserved site	PROSITE	PS01169	RIBOSOMAL_L21	coord: 304..326
IPR036164	L21-like superfamily	SUPERFAMILY	141091	L21p-like	coord: 233..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G008420.1	CmoCh07G008420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome