CmoCh07G008010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G008010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr07: 3681543 .. 3682121 (-)
RNA-Seq Expression	CmoCh07G008010
Synteny	CmoCh07G008010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGAATCATCGTCGTGTTCGAGAAACTCAGAGGAGGTGTTGGATGCGGCGCAGCAGTTGGTACAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTTACGGCGGAGAACAAAAAGAAGAAGAAGATGATGAAGAAGAAGGAAGACGGCGGCGGTGACGGCGGAGAGGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACTTCCATTTGTTGGAAAATTGAAGAGATTTTTGGGAAGGATGATGATGATGATGAAGAAGGTTGTGGGTCAATTTCTCGGCCCAATAAGCGACGGTTTCGATCCATTCAAAGTATCTATATGAACACCAAACCTTTGGTTAATGCTAGATTCTCCGGTAAGGGGATTGTCCAAACTTGATTACGAGGTTACTGGGTTTATCTTATATTAAATATATGACTTTTTTTTTAACAACAACTTTTAAGGTTTTATGTTCAGATTTGAATATCTCACCTCAAATTTCCATATCTCACCTCAAATTTTTAATTCAATTCTAGATACGAAAATAACTTTTAAGGTTTTATATTTAAATAAGGCGAGAATTGA

mRNA sequence

ATGGAGGAAGAATCATCGTCGTGTTCGAGAAACTCAGAGGAGGTGTTGGATGCGGCGCAGCAGTTGGTACAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTTACGGCGGAGAACAAAAAGAAGAAGAAGATGATGAAGAAGAAGGAAGACGGCGGCGGTGACGGCGGAGAGGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACTTCCATTTGTTGGAAAATTGAAGAGATTTTTGGGAAGGATGATGATGATGATGAAGAAGGTTGTGGGTCAATTTCTCGGCCCAATAAGCGACGGTTTCGATCCATTCAAAGTATCTATATGAACACCAAACCTTTGGTTAATGCTAGATTCTCCGGCGAGAATTGA

Coding sequence (CDS)

ATGGAGGAAGAATCATCGTCGTGTTCGAGAAACTCAGAGGAGGTGTTGGATGCGGCGCAGCAGTTGGTACAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTTACGGCGGAGAACAAAAAGAAGAAGAAGATGATGAAGAAGAAGGAAGACGGCGGCGGTGACGGCGGAGAGGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACTTCCATTTGTTGGAAAATTGAAGAGATTTTTGGGAAGGATGATGATGATGATGAAGAAGGTTGTGGGTCAATTTCTCGGCCCAATAAGCGACGGTTTCGATCCATTCAAAGTATCTATATGAACACCAAACCTTTGGTTAATGCTAGATTCTCCGGCGAGAATTGA

Protein sequence

MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEEVDQKRCQIETSICWKIEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPLVNARFSGEN

Homology

[Close]

BLAST of CmoCh07G008010 vs. ExPASy TrEMBL
Match: A0A6J1BYI0 (uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005872 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.8e-34
Identity = 91/124 (73.39%), Postives = 99/124 (79.84%), Query Frame = 0


Query: 3   EESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEE 62
           EE SSCSRN EEVL AAQQL+QLSNEDDSSSNVVTAE KK       K+ GGGDGG EEE
Sbjct: 2   EEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKK-----NNKKRGGGDGG-EEE 61

Query: 63  VDQKRCQIETSICWKIEEIFGKDDDDDEEGCGSISRPNKR--RFRSIQSIYMNTKPLVNA 122
           VDQKRCQIE SI  KIEEIFGK++++ EE   SI RP KR  RFRSIQSIYM TKP++NA
Sbjct: 62  VDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINA 119

Query: 123 RFSG 125
           RFSG
Sbjct: 122 RFSG 119

[Close]

BLAST of CmoCh07G008010 vs. ExPASy TrEMBL
Match: A0A5A7SLI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00160 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.4e-25
Identity = 84/128 (65.62%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKMMKKKEDGGGDGGE 60
           MEEESSS SRNSEEVL AAQQL+QLSN+D+SS+ +VV A  K KKK      D  G GG 
Sbjct: 1   MEEESSS-SRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKK------DCCGGGGR 60

Query: 61  EEEVDQKRCQIETSICWKIEEIFGKDDD---DDEEGCGSISRPNKRRFRSIQSIYMNTKP 120
           EEEVDQKRCQIE+SI  KIEEIFGKD+    D        SRP KRRFRSIQSIYM TKP
Sbjct: 61  EEEVDQKRCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 LV-NARFS 124
           ++ N RFS
Sbjct: 121 MITNGRFS 121

[Close]

BLAST of CmoCh07G008010 vs. ExPASy TrEMBL
Match: A0A6J1GFL5 (uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC111453726 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 77/118 (65.25%), Postives = 85/118 (72.03%), Query Frame = 0


Query: 11  NSEEVLDAAQQLVQLSNEDDS-----SSNVVTAENKKKKKMMKKKEDGG-GDGGEEEEVD 70
           +SEEVL AAQ L+QLS EDD      SSNVV A  K K K +KK   G  GDGGEEEEVD
Sbjct: 5   SSEEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAVEKMKNKKLKKGHGGDRGDGGEEEEVD 64

Query: 71  QKRCQIETSICWKIEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPLVNARF 123
           QKR QIETSI  KIEEIFGK  DD+E+   SI RP KRRFRS+QSIY+ TKP+ N RF
Sbjct: 65  QKRYQIETSIWLKIEEIFGK--DDEEQDFNSICRPKKRRFRSLQSIYVTTKPIGNGRF 120

[Close]

BLAST of CmoCh07G008010 vs. ExPASy TrEMBL
Match: A0A0A0KFU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 74/113 (65.49%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKMMKKKEDGGGDGGE 60
           MEEESSS S NSEEVL AAQQL+QLSN+D+SS+ +VV AE KK KK     + GGG G  
Sbjct: 1   MEEESSS-SPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCR 60

Query: 61  EEEVDQKRCQIETSICWKIEEIFGKDDDDDE--EGCGSI--SRPNKRRFRSIQ 109
           EEEVDQKRCQIE+S+  KIEEIFGKD++ D       SI  SRP KRRFRSIQ
Sbjct: 61  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]

BLAST of CmoCh07G008010 vs. ExPASy TrEMBL
Match: A0A067KGF9 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09460 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-08
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 18  AAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEEVDQKRCQIETSICWK 77
           AAQQL+QLS+ED+S+SN +   N+KK K MKK    G DG  EEE D+   Q E +   K
Sbjct: 21  AAQQLMQLSDEDNSNSNSI---NEKKSKNMKK---SGFDGDIEEEFDRFISQDEIT-SKK 80

Query: 78  IEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPL 118
           IEEIFGK  +++E+    + RP K+R+RS++SIY  TK +
Sbjct: 81  IEEIFGK--EEEEKISIILGRPRKKRYRSLESIYKTTKQI 111

[Close]

BLAST of CmoCh07G008010 vs. NCBI nr
Match: KAG6595108.1 (hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 3.1e-57
Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEE 60
           MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKK+MKKKEDGGGDGGEE
Sbjct: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKKIMKKKEDGGGDGGEE 60

Query: 61  EEVDQKRCQIETSICWKIEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPLVNA 120
           EEVDQKRCQIETSIC KIEEIFGKDDDDDEEGCGSI RPNKRRFRSIQSIYMNTKPLVNA
Sbjct: 61  EEVDQKRCQIETSICSKIEEIFGKDDDDDEEGCGSICRPNKRRFRSIQSIYMNTKPLVNA 120

Query: 121 RFSGE 126
           RFSG+
Sbjct: 121 RFSGK 125

[Close]

BLAST of CmoCh07G008010 vs. NCBI nr
Match: XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 91/124 (73.39%), Postives = 99/124 (79.84%), Query Frame = 0


Query: 3   EESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEE 62
           EE SSCSRN EEVL AAQQL+QLSNEDDSSSNVVTAE KK       K+ GGGDGG EEE
Sbjct: 2   EEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKK-----NNKKRGGGDGG-EEE 61

Query: 63  VDQKRCQIETSICWKIEEIFGKDDDDDEEGCGSISRPNKR--RFRSIQSIYMNTKPLVNA 122
           VDQKRCQIE SI  KIEEIFGK++++ EE   SI RP KR  RFRSIQSIYM TKP++NA
Sbjct: 62  VDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINA 119

Query: 123 RFSG 125
           RFSG
Sbjct: 122 RFSG 119

[Close]

BLAST of CmoCh07G008010 vs. NCBI nr
Match: XP_031742655.1 (uncharacterized protein LOC116404425 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26
Identity = 85/128 (66.41%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKMMKKKEDGGGDGGE 60
           MEEESSS S NSEEVL AAQQL+QLSN+D+SS+ +VV AE KK KK     + GGG G  
Sbjct: 1   MEEESSS-SPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCR 60

Query: 61  EEEVDQKRCQIETSICWKIEEIFGKDDDDDE--EGCGSI--SRPNKRRFRSIQSIYMNTK 120
           EEEVDQKRCQIE+S+  KIEEIFGKD++ D       SI  SRP KRRFRSIQSIYM TK
Sbjct: 61  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTK 120

Query: 121 PLVNARFS 124
           P+ N RFS
Sbjct: 121 PITNGRFS 127

[Close]

BLAST of CmoCh07G008010 vs. NCBI nr
Match: KAG6604263.1 (hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.8 bits (312), Expect = 5.3e-25
Identity = 79/118 (66.95%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 11  NSEEVLDAAQQLVQLSNEDDS-----SSNVVTAENKKKKKMMKKKEDGG-GDGGEEEEVD 70
           +SEEVL AAQ L+QLS EDD      SSNVV A  KKK K +KK   G  GDGGEEEEVD
Sbjct: 5   SSEEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAAEKKKNKKLKKGHGGDRGDGGEEEEVD 64

Query: 71  QKRCQIETSICWKIEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPLVNARF 123
           QKR QIETSI  KIEEIFGK  DD+EE   SI RP KRRFRS+QSIY+ TKP+ N RF
Sbjct: 65  QKRYQIETSIWLKIEEIFGK--DDEEEDFNSICRPKKRRFRSLQSIYITTKPIGNGRF 120

[Close]

BLAST of CmoCh07G008010 vs. NCBI nr
Match: KAA0025567.1 (hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK12441.1 hypothetical protein E5676_scaffold255G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 9.1e-25
Identity = 84/128 (65.62%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKMMKKKEDGGGDGGE 60
           MEEESSS SRNSEEVL AAQQL+QLSN+D+SS+ +VV A  K KKK      D  G GG 
Sbjct: 1   MEEESSS-SRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKK------DCCGGGGR 60

Query: 61  EEEVDQKRCQIETSICWKIEEIFGKDDD---DDEEGCGSISRPNKRRFRSIQSIYMNTKP 120
           EEEVDQKRCQIE+SI  KIEEIFGKD+    D        SRP KRRFRSIQSIYM TKP
Sbjct: 61  EEEVDQKRCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 LV-NARFS 124
           ++ N RFS
Sbjct: 121 MITNGRFS 121

The following BLAST results are available for this feature:

BLAST of CmoCh07G008010 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh07G008010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYI0	6.8e-34	73.39	uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5A7SLI9	4.4e-25	65.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1GFL5	3.7e-24	65.25	uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A0A0KFU1	1.2e-19	65.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1	[more]
A0A067KGF9	2.9e-08	49.00	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09460 PE=4 SV=1	[more]

BLAST of CmoCh07G008010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595108.1	3.1e-57	96.80	hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022133223.1	1.4e-33	73.39	uncharacterized protein LOC111005872 [Momordica charantia]	[more]
XP_031742655.1	1.7e-26	66.41	uncharacterized protein LOC116404425 [Cucumis sativus]	[more]
KAG6604263.1	5.3e-25	66.95	hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0025567.1	9.1e-25	65.63	hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK1244...	[more]

BLAST of CmoCh07G008010 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G008010.1	CmoCh07G008010.1	mRNA