CmoCh07G007600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G007600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CASP-like protein
Location	Cmo_Chr07: 3425643 .. 3427678 (+)
RNA-Seq Expression	CmoCh07G007600
Synteny	CmoCh07G007600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCCCAAGCTTGGTCCTCCGTTTGGGGCAGGCGATTTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATCGAGTTCTACAGCTACACGGCTTTCTGGTAATCATATTCTTTTAACCCCTGTTTTCTTCAGTTCCTTACTTCTCCAATTAGGTTTTTTTTGTCCTGGTTTTCTGATCATGGTTGGATTAATACATCATGTTTTGTAAGTAGCAACTTGTGTTAGTTTCGTGGCCTAAGTTCAATTCCAATCCATGCATTTTGTATATTAGTATATCAAATGTTTGATTACTGCCTATAGGAATTGATTAAGAACCACCTAACTTTAACAGGATATGTTCTATAGGTACTACTGTGTTCTTGAGTTCATTAGGAATTGATTAATGGATTGTAGAAAAACTGTGTTCTTTCGAAAAGTTGTAAGTTTAGATAATTTTGATGAAGCCATGGTAACCACCCATTTAAGGAAAGGAATGGTATAGGAGCTTCTTTGTACCGAATGAGTTGTTTAATAGGATTAGTCAAAGGGCATGTAAAAATTTGATTGTTAATGCCAACCCGAGCATACACGCTCCCACGTTCGCTTCTTTGCCCATTTTTATCGAAGAAAGTGGAAGTTAGAGGTTGAATTTTGTTTGAAGTTAAGGTTCATGAACTATCCACTAATCCAATGGCCTGTTAACTTGAAGTTGAAAGTGATTTTTAGTAAAAATCAGACTTAAAATTTTGTAACATTTGTCATCGTTTTTTTTATGTAATTTCTACCATGGCAAGGTGGAAATCAAAGCATCATCCTTCAGGGTTGTAAAAGGTACTTCATCTATTAAACTATGCTCGGATTGAAACATTTCTTTCCGTTGTTATTTCAAGGAAGATGAATCGTATTTCAACAAGAATTAGCTGATCCGGGTTGTGCTAATATACTAATGGAATCATTTCAAACTAGTTTACAAATTACAGAGCGGAAGCCTAAAATGACTGTTTGTTGGGAATTCAAATGTTTGGTAGCTCTGGATGTCTAGTTTTGGAACTGTTTATACGATGAACTTTCTATTTTCTAAACAAAAAGTTGTCTGATCACACCAAGTTTTCTAGTACAGAGTGATTAGCATTGTCCAGTATTTTAGTAATCAGTTGTAAGGTGAAAAATTCTTATCAAAATGATGTAAGGGCACATAGGAAGAACTAGAAGGATACTTGTTTGATGTTCTTCTCCAAAACATTGGGCCATTTGTTTTTTTGTTGGCATGCTTATGTTCTAGCTGCAGCTATTTCGACACAAGGATAACGACATCGAGTTTAATATGTTTGGAGTCAGACTGATGATGTTAACGATGAAGATTTCTGTTATTTCGACATCGAGTTTAATGATCTTAGAACAACTTCTGATAGATGTTCTTCCAGGAGGGCATAAATTATGAGAACTTGAGCTAATTTTCTGCTCTTTTTCCTGCAAAAGATATGAAGATCCAAAATCTCAAGAAAACTTTATGATTGCTCATGTTAATTCCCCCAGCTATCTAGTGACAATCATGGGCTTGATGGTTCCTTGGAGTCTGACATTGGCAGTAGTGGACGGATATTCGGTTTTTGTTAGGCATTTACCTCCTCAGGCGAGAGTAACGGCGATCATCGTCGCCGGAGACTGGGTACGAAAGAAATACCCTCTAGGAAATGATCATATATTAACATCTTTGTGTCTTTGCAGTCTAGGTTGAAAAATGAATGAAAACAATTTACATTTGCTGTGTAATATAGGTTCTATCATTTCTCGCCTTGGCCGCTTCCTGCTCGACAGCCAGTGTCGCCGACGTGTTGCTCAAAGTCGGGGTGCCGTATTGTTCGGCAAAGCTTTGCAGTAGATATAGACTTTCAGCAGCAATGGCTTTCTTGTCATGGTTTCTTTCTCTGGTTTCTGCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAAAGTTGATCATTATGTTCATGTCGTTTCTGGAAAACTGTACATGTCAAAAAA

mRNA sequence

ATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCCCAAGCTTGGTCCTCCGTTTGGGGCAGGCGATTTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATCGAGTTCTACAGCTACACGGCTTTCTGCTATCTAGTGACAATCATGGGCTTGATGGTTCCTTGGAGTCTGACATTGGCAGTAGTGGACGGATATTCGGTTTTTGTTAGGCATTTACCTCCTCAGGCGAGAGTAACGGCGATCATCGTCGCCGGAGACTGGGTTCTATCATTTCTCGCCTTGGCCGCTTCCTGCTCGACAGCCAGTGTCGCCGACGTGTTGCTCAAAGTCGGGGTGCCGTATTGTTCGGCAAAGCTTTGCAGTAGATATAGACTTTCAGCAGCAATGGCTTTCTTGTCATGGTTTCTTTCTCTGGTTTCTGCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAAAGTTGATCATTATGTTCATGTCGTTTCTGGAAAACTGTACATGTCAAAAAA

Coding sequence (CDS)

ATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCCCAAGCTTGGTCCTCCGTTTGGGGCAGGCGATTTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATCGAGTTCTACAGCTACACGGCTTTCTGCTATCTAGTGACAATCATGGGCTTGATGGTTCCTTGGAGTCTGACATTGGCAGTAGTGGACGGATATTCGGTTTTTGTTAGGCATTTACCTCCTCAGGCGAGAGTAACGGCGATCATCGTCGCCGGAGACTGGGTTCTATCATTTCTCGCCTTGGCCGCTTCCTGCTCGACAGCCAGTGTCGCCGACGTGTTGCTCAAAGTCGGGGTGCCGTATTGTTCGGCAAAGCTTTGCAGTAGATATAGACTTTCAGCAGCAATGGCTTTCTTGTCATGGTTTCTTTCTCTGGTTTCTGCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAA

Protein sequence

MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL

Homology

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BLAST of CmoCh07G007600 vs. ExPASy Swiss-Prot
Match: D7LTJ4 (CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_485429 PE=3 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-39
Identity = 81/152 (53.29%), Postives = 107/152 (70.39%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           ME +PG+ GTS S  LR GQ IF++ASL FMC + +FY +T FCYL T+M ++ PWS+ L
Sbjct: 1   MENVPGSFGTSASFALRFGQTIFSAASLIFMCFDYDFYDFTTFCYLATVMAIVTPWSILL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           A+ D YSV V+ LP + RV +I+ AGD+VLSFL+L  +C+ AS  ++L       C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGNL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           C +Y++SAA+AFL WFL L SALFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. ExPASy Swiss-Prot
Match: P0CB17 (CASP-like protein 5C2 OS=Arabidopsis thaliana OX=3702 GN=At3g50810 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 80/152 (52.63%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           ME +PG+ GTS S  LR GQ IF++ASL FMC + +FY +T FCYL  +M ++ PWS+ L
Sbjct: 1   MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           A+ D YSV V+ LP + RV +I+ AGD+VLSFL+L  +C+ AS  ++L       C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           C +Y++SAA+AFL WFL L SALFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. ExPASy Swiss-Prot
Match: Q66GI1 (CASP-like protein 5C1 OS=Arabidopsis thaliana OX=3702 GN=At4g37235 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-37
Identity = 89/154 (57.79%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCL--EIEFYSYTAFCYLVTIMGLMVPWSL 60
           M     + GTS S VLRLGQ +F+SASL FMC   + +FY+YT FCYLVT+MGL+ PWS+
Sbjct: 1   MVRTTASFGTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSV 60

Query: 61  TLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSA 120
           TLA+++ YS+ V+ LP QA V ++IVAGD+VLSFL+L  +CSTASVA +L+  G      
Sbjct: 61  TLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLLMDAG-----E 120

Query: 121 KLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           K C RY+LSA MAFLS FLS  S  FN  LLPSL
Sbjct: 121 KQCDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149

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BLAST of CmoCh07G007600 vs. ExPASy Swiss-Prot
Match: Q10EJ2 (CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-37
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 6   GALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTLAVVDG 65
           GA+G++ SL LR+GQA+F+SASL FM + +EF+SYTAFC+LVTIMGL++PWS TLA++D 
Sbjct: 10  GAVGSAGSLGLRVGQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKLCSRYR 125
           YS+ V        V  I+V GDWVL+ L+LAA+ S+A+V D+LL+    +CS + C RY+
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 LSAAMAFLSWFLSLVSALFNLWLLPS 152
           LSA MAFLSWFL+  S+LFNLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

[Close]

BLAST of CmoCh07G007600 vs. ExPASy Swiss-Prot
Match: B8BPI2 (CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36
Identity = 82/146 (56.16%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 6   GALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTLAVVDG 65
           GA+G++ SL LR+ QA+F+SASL FM + +EF+SYTAFC+LVTIMGL++PWS TLA++D 
Sbjct: 10  GAVGSAGSLGLRVEQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKLCSRYR 125
           YS+ V        V  I+V GDWVL+ L+LAA+ S+A+V D+LL+    +CS + C RY+
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 LSAAMAFLSWFLSLVSALFNLWLLPS 152
           LSA MAFLSWFL+  S+LFNLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

[Close]

BLAST of CmoCh07G007600 vs. ExPASy TrEMBL
Match: A0A6J1HFU7 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463114 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.7e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. ExPASy TrEMBL
Match: A0A6J1KN13 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497151 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.2e-74
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVAD+LLKVGVPYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADILLKVGVPYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. ExPASy TrEMBL
Match: A0A5D3CP47 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005330 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.3e-67
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTS SL LRLGQAIFASASLFFMCLEIEFYSYTAFCYLVT+MGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASVAD+LL+ G+ YCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. ExPASy TrEMBL
Match: A0A0A0KG19 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G488330 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.3e-67
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTS SL LRLGQAIFASASLFFMCLEIEFYSYTAFCYLVT+MGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASVAD+LL+ G+ YCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. ExPASy TrEMBL
Match: A0A1S3B191 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103484722 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.3e-67
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTS SL LRLGQAIFASASLFFMCLEIEFYSYTAFCYLVT+MGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASVAD+LL+ G+ YCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. NCBI nr
Match: XP_022962700.1 (CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023517373.1 CASP-like protein ARALYDRAFT_485429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 9.8e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. NCBI nr
Match: XP_023003597.1 (CASP-like protein ARALYDRAFT_485429 [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-73
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVAD+LLKVGVPYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADILLKVGVPYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. NCBI nr
Match: XP_004141947.1 (CASP-like protein ARALYDRAFT_485429 [Cucumis sativus] >XP_008440180.1 PREDICTED: CASP-like protein ARALYDRAFT_485429 [Cucumis melo] >KGN48463.1 hypothetical protein Csa_003565 [Cucumis sativus] >TYK12938.1 CASP-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 6.8e-67
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTS SL LRLGQAIFASASLFFMCLEIEFYSYTAFCYLVT+MGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASVAD+LL+ G+ YCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. NCBI nr
Match: XP_038883818.1 (CASP-like protein ARALYDRAFT_485429 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 6.8e-67
Identity = 135/152 (88.82%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTS SL LRLGQ+IFASASLFFMCLEIEFYSYTAFCYLVT+MGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQSIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASVAD+LL+ G+ YCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSL+S+LFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 152

[Close]

BLAST of CmoCh07G007600 vs. NCBI nr
Match: XP_022132440.1 (CASP-like protein ARALYDRAFT_485429 [Momordica charantia])

HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66
Identity = 134/152 (88.16%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           MEELPGALGTS SL LRLGQ +FA+ASLFFMCLEIEFYSYTAFCYLVT+MGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQTVFATASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           AVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASVAD+LL+ G+ YCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLRAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLVSSLFNLWLLPSL 152

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BLAST of CmoCh07G007600 vs. TAIR 10
Match: AT3G50810.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 161.0 bits (406), Expect = 7.5e-40
Identity = 80/152 (52.63%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           ME +PG+ GTS S  LR GQ IF++ASL FMC + +FY +T FCYL  +M ++ PWS+ L
Sbjct: 1   MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           A+ D YSV V+ LP + RV +I+ AGD+VLSFL+L  +C+ AS  ++L       C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           C +Y++SAA+AFL WFL L SALFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

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BLAST of CmoCh07G007600 vs. TAIR 10
Match: AT4G37235.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 89/154 (57.79%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCL--EIEFYSYTAFCYLVTIMGLMVPWSL 60
           M     + GTS S VLRLGQ +F+SASL FMC   + +FY+YT FCYLVT+MGL+ PWS+
Sbjct: 1   MVRTTASFGTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSV 60

Query: 61  TLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSA 120
           TLA+++ YS+ V+ LP QA V ++IVAGD+VLSFL+L  +CSTASVA +L+  G      
Sbjct: 61  TLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLLMDAG-----E 120

Query: 121 KLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           K C RY+LSA MAFLS FLS  S  FN  LLPSL
Sbjct: 121 KQCDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149

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BLAST of CmoCh07G007600 vs. TAIR 10
Match: AT1G49405.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 151.4 bits (381), Expect = 6.0e-37
Identity = 82/152 (53.95%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           M E+PG++GT+ SL LRLGQ + A  SL FM + + FY +TAFCYLVTIM L +PW+LTL
Sbjct: 1   MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           A+VD Y V ++    + R+   I  GDWV+S LALA++ S ASV D+ L+     C   +
Sbjct: 61  AMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDI-LRSNESSCPPTI 120

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 153
           C+RY+ +A +AFL+WFLSL S+LFNLWLLPSL
Sbjct: 121 CNRYQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

[Close]

BLAST of CmoCh07G007600 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 101.3 bits (251), Expect = 7.1e-22
Identity = 63/152 (41.45%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           M ++PG  GT   LVLR+ Q +FA+ S+ +M     F+S+TAFCYL+  MGL V WS  L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           A++D +++  +       + ++ V GDWV S L+LA + S+A +  VL    +  CS + 
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGIT-VLYFGDLGSCSFEA 120

Query: 121 -CSRYRLSAAMAFLSWFLSLVSALFNLWLLPS 152
            C +Y+LS A+AFL W    VS+L  LWLL S
Sbjct: 121 ECWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of CmoCh07G007600 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 62/151 (41.06%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 1   MEELPGALGTSPSLVLRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTIMGLMVPWSLTL 60
           M+++ G  GT   L LR  Q +FA+A+L  M    +F S TAFCYLV   GL   WSL L
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query: 61  AVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKL 120
           A+VD Y++ V+      R+ ++   GD V S L  AA+C++A +  VL+   +  C+   
Sbjct: 89  AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGIT-VLIDNDLNSCAQNH 148

Query: 121 CSRYRLSAAMAFLSWFLSLVSALFNLWLLPS 152
           C ++  S A+AF+SWF +L S LFN W L S
Sbjct: 149 CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

The following BLAST results are available for this feature:

BLAST of CmoCh07G007600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D7LTJ4	2.8e-39	53.29	CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972...	[more]
P0CB17	1.1e-38	52.63	CASP-like protein 5C2 OS=Arabidopsis thaliana OX=3702 GN=At3g50810 PE=2 SV=1	[more]
Q66GI1	1.5e-37	57.79	CASP-like protein 5C1 OS=Arabidopsis thaliana OX=3702 GN=At4g37235 PE=2 SV=1	[more]
Q10EJ2	1.5e-37	56.85	CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 P...	[more]
B8BPI2	1.3e-36	56.16	CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 S...	[more]

BLAST of CmoCh07G007600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFU7	4.7e-74	100.00	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463114 PE=3 SV=1	[more]
A0A6J1KN13	6.2e-74	99.34	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497151 PE=3 SV=1	[more]
A0A5D3CP47	3.3e-67	89.47	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00...	[more]
A0A0A0KG19	3.3e-67	89.47	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G488330 PE=3 SV=1	[more]
A0A1S3B191	3.3e-67	89.47	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103484722 PE=3 SV=1	[more]

BLAST of CmoCh07G007600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962700.1	9.8e-74	100.00	CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023517373.1 CASP-li...	[more]
XP_023003597.1	1.3e-73	99.34	CASP-like protein ARALYDRAFT_485429 [Cucurbita maxima]	[more]
XP_004141947.1	6.8e-67	89.47	CASP-like protein ARALYDRAFT_485429 [Cucumis sativus] >XP_008440180.1 PREDICTED:...	[more]
XP_038883818.1	6.8e-67	88.82	CASP-like protein ARALYDRAFT_485429 [Benincasa hispida]	[more]
XP_022132440.1	1.5e-66	88.16	CASP-like protein ARALYDRAFT_485429 [Momordica charantia]	[more]

BLAST of CmoCh07G007600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50810.1	7.5e-40	52.63	Uncharacterised protein family (UPF0497)	[more]
AT4G37235.1	1.1e-38	57.79	Uncharacterised protein family (UPF0497)	[more]
AT1G49405.1	6.0e-37	53.95	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	7.1e-22	41.45	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	1.6e-21	41.06	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 10..137 e-value: 2.8E-21 score: 75.9
None	No IPR available	PANTHER	PTHR32021:SF30	CASP-LIKE PROTEIN 5C1	coord: 1..151
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G007600.1	CmoCh07G007600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane