CmoCh07G006510 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G006510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Amino-acid N-acetyltransferase
Location	Cmo_Chr07: 2934817 .. 2935026 (+)
RNA-Seq Expression	CmoCh07G006510
Synteny	CmoCh07G006510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCGGCTCCGTTCGGTGGAAGAAGAAAGTTGGATTTGGGATTGGCGGCGGCGGCGGCGAGAGGCTGTAAATGGGAGGAGTTTAAAACAACCGACCAGCCGCCGGGAATTGAGATTAACAAAGATCCTTATAAAGTTTCTGAAGAAGACGAGAGGTTTATTGAAGAATTCTTGTTTTTAGTTGTAATTGTAACTGGAACTCTGTGA

mRNA sequence

ATGATTCCGGCTCCGTTCGGTGGAAGAAGAAAGTTGGATTTGGGATTGGCGGCGGCGGCGGCGAGAGGCTGTAAATGGGAGGAGTTTAAAACAACCGACCAGCCGCCGGGAATTGAGATTAACAAAGATCCTTATAAAGTTTCTGAAGAAGACGAGAGGTTTATTGAAGAATTCTTGTTTTTAGTTGTAATTGTAACTGGAACTCTGTGA

Coding sequence (CDS)

ATGATTCCGGCTCCGTTCGGTGGAAGAAGAAAGTTGGATTTGGGATTGGCGGCGGCGGCGGCGAGAGGCTGTAAATGGGAGGAGTTTAAAACAACCGACCAGCCGCCGGGAATTGAGATTAACAAAGATCCTTATAAAGTTTCTGAAGAAGACGAGAGGTTTATTGAAGAATTCTTGTTTTTAGTTGTAATTGTAACTGGAACTCTGTGA

Protein sequence

MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEFLFLVVIVTGTL

Homology

[Close]

BLAST of CmoCh07G006510 vs. ExPASy TrEMBL
Match: A0A6J1HES5 (Amino-acid N-acetyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111463325 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.3e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEFL 60
          MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEFL
Sbjct: 36 MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEFL 94

[Close]

BLAST of CmoCh07G006510 vs. ExPASy TrEMBL
Match: A0A6J1KVT8 (Amino-acid N-acetyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111496888 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 55/62 (88.71%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1  MIPAPFGGRRKLDLGL----AAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIE 59
          MIPAPFGGRRKLDLGL    AAAAARGCKWEEFKTTDQPP I INKDPYKVSEEDER+IE
Sbjct: 36 MIPAPFGGRRKLDLGLAAAAAAAAARGCKWEEFKTTDQPPEIGINKDPYKVSEEDERYIE 95

[Close]

BLAST of CmoCh07G006510 vs. ExPASy TrEMBL
Match: A0A6J1BXB3 (Amino-acid N-acetyltransferase OS=Momordica charantia OX=3673 GN=LOC111005562 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-05
Identity = 36/63 (57.14%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 2  IPAPFG---GRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEI---NKDPYKVSEEDERFI 59
          I AP G   GR K    L  AA +GCKWEE KTTDQ   I     N D +KVSEED RFI
Sbjct: 35 IGAPLGHDSGRIKKGY-LGLAAVKGCKWEEVKTTDQAQKIGANGNNNDAHKVSEEDSRFI 94

[Close]

BLAST of CmoCh07G006510 vs. ExPASy TrEMBL
Match: A0A5D3CLM4 (Amino-acid N-acetyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003950 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.2e-04
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8   GRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPY--KVSEEDERFIEEF 59
           GRRKL+ GL  AA + C  EE KTT + P IE   D Y  KV+EED RFIEEF
Sbjct: 51  GRRKLNTGL--AAGKVCNREEVKTTAEGPEIETKNDAYYNKVTEEDRRFIEEF 101

[Close]

BLAST of CmoCh07G006510 vs. ExPASy TrEMBL
Match: A0A1S3B1T5 (Amino-acid N-acetyltransferase OS=Cucumis melo OX=3656 GN=LOC103484863 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.2e-04
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8   GRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPY--KVSEEDERFIEEF 59
           GRRKL+ GL  AA + C  EE KTT + P IE   D Y  KV+EED RFIEEF
Sbjct: 51  GRRKLNTGL--AAGKVCNREEVKTTAEGPEIETKNDAYYNKVTEEDRRFIEEF 101

[Close]

BLAST of CmoCh07G006510 vs. NCBI nr
Match: XP_022962976.1 (probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEFL 60
          MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEFL
Sbjct: 36 MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEFL 94

[Close]

BLAST of CmoCh07G006510 vs. NCBI nr
Match: XP_023517795.1 (probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-22
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 1  MIPAPFGGRRKLDLGLAAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEF 59
          MIPAPFGGRRKLDLGLAAA A GCKWEEFKT+DQPPGIEINKDPYKV EEDERFIEEF
Sbjct: 36 MIPAPFGGRRKLDLGLAAAEAIGCKWEEFKTSDQPPGIEINKDPYKVCEEDERFIEEF 93

[Close]

BLAST of CmoCh07G006510 vs. NCBI nr
Match: XP_023003203.1 (probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-21
Identity = 55/62 (88.71%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1  MIPAPFGGRRKLDLGL----AAAAARGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIE 59
          MIPAPFGGRRKLDLGL    AAAAARGCKWEEFKTTDQPP I INKDPYKVSEEDER+IE
Sbjct: 36 MIPAPFGGRRKLDLGLAAAAAAAAARGCKWEEFKTTDQPPEIGINKDPYKVSEEDERYIE 95

[Close]

BLAST of CmoCh07G006510 vs. NCBI nr
Match: KAG7026930.1 (putative amino-acid acetyltransferase NAGS2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 1  MIPAPFGGRRKLDLGLAAAAA-RGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEF 59
          MIPAPFGGRRKL+LGLAAAAA RGCK EEFKTTDQPP I I+KDPYKVSEEDERFIEEF
Sbjct: 36 MIPAPFGGRRKLELGLAAAAAVRGCKREEFKTTDQPPEIGIHKDPYKVSEEDERFIEEF 94

[Close]

BLAST of CmoCh07G006510 vs. NCBI nr
Match: KAG6594970.1 (hypothetical protein SDJN03_11523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103.6 bits (257), Expect = 7.0e-19
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 1  MIPAPFGGRRKLDLGLAAAAA--RGCKWEEFKTTDQPPGIEINKDPYKVSEEDERFIEEF 59
          MIPAPFGGRRKL+LGLAAAAA  RGCK EEFKTTDQPP I I+KDPYKVSEEDERF+EEF
Sbjct: 36 MIPAPFGGRRKLELGLAAAAAAVRGCKREEFKTTDQPPEIGIHKDPYKVSEEDERFMEEF 95

The following BLAST results are available for this feature:

BLAST of CmoCh07G006510 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh07G006510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HES5	6.3e-26	100.00	Amino-acid N-acetyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111463325 PE=...	[more]
A0A6J1KVT8	1.2e-21	88.71	Amino-acid N-acetyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111496888 PE=3 ...	[more]
A0A6J1BXB3	2.8e-05	57.14	Amino-acid N-acetyltransferase OS=Momordica charantia OX=3673 GN=LOC111005562 PE...	[more]
A0A5D3CLM4	5.2e-04	58.49	Amino-acid N-acetyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B1T5	5.2e-04	58.49	Amino-acid N-acetyltransferase OS=Cucumis melo OX=3656 GN=LOC103484863 PE=3 SV=1	[more]

BLAST of CmoCh07G006510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962976.1	1.3e-25	100.00	probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X2 [Cucurbita...	[more]
XP_023517795.1	1.4e-22	93.10	probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X1 [Cucurbita...	[more]
XP_023003203.1	2.6e-21	88.71	probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X1 [Cucurbita...	[more]
KAG7026930.1	2.4e-19	89.83	putative amino-acid acetyltransferase NAGS2, chloroplastic, partial [Cucurbita a...	[more]
KAG6594970.1	7.0e-19	86.67	hypothetical protein SDJN03_11523, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh07G006510 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G006510.1	CmoCh07G006510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006526	arginine biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004042	acetyl-CoA:L-glutamate N-acetyltransferase activity
molecular_function	GO:0103045	methione N-acyltransferase activity