CmoCh07G006230 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G006230
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
LocationCmo_Chr07: 2808783 .. 2809999 (-)
RNA-Seq ExpressionCmoCh07G006230
SyntenyCmoCh07G006230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATGGCGTGATAAGGTGGGAGTGTTCAGAACAAAATCAGAACGAACTCACAAGAAAACCCAAATTCCAAAAGTTCAATTAAAAACCAGAAATGAAAGAGAGAGAAAATAAAAGGGAAACGAAAACGAAATCCCACTCGTACACAGCTGCCATTGCGCTGCTCACATCTGCTAATTTGTTCTGTTTAACTCTGTTTTTTAGGCTCTTCTTTCGAGTTCTGAGGAGCTCTGCAATTTTCGGTACTCTCTGCTCTCATTTTCTCTTTTCTTTTTCTTTTTGTCTTCCATGTTCCATCATCTCAAATATCATTCTCAGACTAAGATAGATTCAGAGGGAATTCATTTTATATGATATGCACGTACGAGCAGTATAGAGTGAAAAATCAGAAGCTAATCTCACTTTTTTCTCCCCATCTCTCTGTTAGAACGAAAAGAAAAAATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCAGTAGAATCTTGTGTGCGACTGTTTCTTTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGTAAATGGGTATCTCTTGAAACTTCAAAAAAAAGTCCGAAACCAAAATTCTTGAACTGAATTCTTGTGAATCGTTTTCCTTTGCAGGCAGATCTATTTCAAAGAGTGGCAAGGTCAGTCCACAAGGCCAGCCCTTTCCTCTCTTTTTGATTCATTTACTGTTTCTGAAAGCTTGATTGTTAAGAAGAAATTTGGTTTTTGTTTTGGTGAATTGGGATAGACAGTGAGTGAAGATAAAGTGGTATTACGTGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCTTCAGCAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAAGTAGATGATCATCGTCAACTCTGTAAATTAGTGATTATATGATTGTTTCTTTCACTTAACACTCTCTAGATATCTCTCTCTTTTGTTCTGACACTCTTGAGGGTTGAAAGCAGGCATTTGATGAAGAGAATTATGAACTGGGTTTCTTTTCTAACATGCAACTACTTCGGATTCCTTCCATATCAGTTTCGTCTTGAAACACTTAAATGGGAT

mRNA sequence

ATGGATATGGCGTGATAAGGTGGGAGTGTTCAGAACAAAATCAGAACGAACTCACAAGAAAACCCAAATTCCAAAAGTTCAATTAAAAACCAGAAATGAAAGAGAGAGAAAATAAAAGGGAAACGAAAACGAAATCCCACTCGTACACAGCTGCCATTGCGCTGCTCACATCTGCTAATTTGTTCTGTTTAACTCTGTTTTTTAGGCTCTTCTTTCGAGTTCTGAGGAGCTCTGCAATTTTCGAACGAAAAGAAAAAATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCAGTAGAATCTTGTGTGCGACTGTTTCTTTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGCAGATCTATTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGGTATTACGTGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCTTCAGCAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAAGTAGATGATCATCGTCAACTCTGTAAATTAGTGATTATATGATTGTTTCTTTCACTTAACACTCTCTAGATATCTCTCTCTTTTGTTCTGACACTCTTGAGGGTTGAAAGCAGGCATTTGATGAAGAGAATTATGAACTGGGTTTCTTTTCTAACATGCAACTACTTCGGATTCCTTCCATATCAGTTTCGTCTTGAAACACTTAAATGGGAT

Coding sequence (CDS)

ATGAAAGAGAGAGAAAATAAAAGGGAAACGAAAACGAAATCCCACTCGTACACAGCTGCCATTGCGCTGCTCACATCTGCTAATTTGTTCTGTTTAACTCTGTTTTTTAGGCTCTTCTTTCGAGTTCTGAGGAGCTCTGCAATTTTCGAACGAAAAGAAAAAATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCAGTAGAATCTTGTGTGCGACTGTTTCTTTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGCAGATCTATTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGGTATTACGTGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCTTCAGCAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA

Protein sequence

MKERENKRETKTKSHSYTAAIALLTSANLFCLTLFFRLFFRVLRSSAIFERKEKMGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP
Homology
[Close]
BLAST of CmoCh07G006230 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-21
Identity = 59/119 (49.58%), Postives = 72/119 (60.50%), Query Frame = 0 

Query: 78  LFFLILASTQMRFMAEGR------SISKSGKTVSEDKVVLRGQIGSRPPKCER-RCSWCA 137
           L  LIL ST    MA GR        +KSG    + K+++RG IGSRPP+CER RC  C 
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEFTKSGD--QDVKMMMRGLIGSRPPRCERVRCRSCG 71

Query: 138 HCEAIQVPANPQ------------KSSAMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 177
           HCEAIQVP NPQ             SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CmoCh07G006230 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 112 RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMK-------------NIAYARDEAS 171
           + ++GS PP C  RC+ C  C AIQVP  P +S   +             ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 172 NYKPMSWKCKCGSLIFNP 177
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CmoCh07G006230 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.3e-07
Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 0 

Query: 106 EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSW 165
           E+ V  R +IGS+PP CE++C  C  CEAIQ P        + +I +     +NY+P  W
Sbjct: 48  EEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP-------TISSIPHLSPHYANYQPEGW 104

Query: 166 KCKC 170
           +C C
Sbjct: 108 RCHC 104

[Close]
BLAST of CmoCh07G006230 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 35/116 (30.17%), Postives = 49/116 (42.24%), Query Frame = 0 

Query: 67  RSRILCATVSFLFFLILASTQMRFMAEGRSISK------SGKTVSEDKVVLRGQIGSRPP 126
           R R L A +     L L S      A+GR I +       G  +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 127 KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 177
            C  +C  C  C+ + VP  P  S  ++           Y P +W+CKCG+ +F P
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSMPLE-----------YYPEAWRCKCGNKLFMP 109

[Close]
BLAST of CmoCh07G006230 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.9e-05
Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 

Query: 113 GQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSL 172
           G  GS PP C  +C  C  C+A+ VP  P     ++           Y P +W+CKCG+ 
Sbjct: 55  GGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLE-----------YYPEAWRCKCGNK 107

Query: 173 IFNP 177
           +F P
Sbjct: 115 LFMP 107

[Close]
BLAST of CmoCh07G006230 vs. ExPASy TrEMBL
Match: A0A6J1HJ94 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463445 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.8e-94
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MKERENKRETKTKSHSYTAAIALLTSANLFCLTLFFRLFFRVLRSSAIFERKEKMGCECN 60
           MKERENKRETKTKSHSYTAAIALLTSANLFCLTLFFRLFFRVLRSSAIFERKEKMGCECN
Sbjct: 1   MKERENKRETKTKSHSYTAAIALLTSANLFCLTLFFRLFFRVLRSSAIFERKEKMGCECN 60

Query: 61  NNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPP 120
           NNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPP
Sbjct: 61  NNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPP 120

Query: 121 KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 177
           KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP
Sbjct: 121 KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 176

[Close]
BLAST of CmoCh07G006230 vs. ExPASy TrEMBL
Match: A0A6J1KNP8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64
Identity = 123/134 (91.79%), Postives = 123/134 (91.79%), Query Frame = 0 

Query: 43  LRSSAIFERKEKMGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGK 102
           L  S     K KMGCECNNNGVIGR RILCATVSFLF LILASTQMRFMAEGRSISKSGK
Sbjct: 18  LSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGK 77

Query: 103 TVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKP 162
           TVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSS MKNIAYARDEASNYKP
Sbjct: 78  TVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKP 137

Query: 163 MSWKCKCGSLIFNP 177
           MSWKCKCGSLIFNP
Sbjct: 138 MSWKCKCGSLIFNP 151

[Close]
BLAST of CmoCh07G006230 vs. ExPASy TrEMBL
Match: A0A6J1KLZ1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.7e-63
Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 55  MGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 114
           MGCECNNNGVIGR RILCATVSFLF LILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ
Sbjct: 1   MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 60

Query: 115 IGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIF 174
           IGSRPPKCERRCSWCAHCEAIQVPANPQKSS MKNIAYARDEASNYKPMSWKCKCGSLIF
Sbjct: 61  IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF 120

Query: 175 NP 177
           NP
Sbjct: 121 NP 122

[Close]
BLAST of CmoCh07G006230 vs. ExPASy TrEMBL
Match: A0A6J1BSQ3 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111005366 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.4e-55
Identity = 107/127 (84.25%), Postives = 111/127 (87.40%), Query Frame = 0 

Query: 55  MGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 114
           M CECNNNGVIGRSRILCATV FLF LILASTQMRFMAEGR + K G+TV E+KVVLRGQ
Sbjct: 1   MSCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRLVPKRGQTVGEEKVVLRGQ 60

Query: 115 IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSAMKNIAYARDEASNYKPMSWKCKC 174
           IGSRPPKCERRCSWC HCEAIQVP NPQK     SSA  N+AYARDEASNYKPMSWKCKC
Sbjct: 61  IGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSWKCKC 120

Query: 175 GSLIFNP 177
           GSLIFNP
Sbjct: 121 GSLIFNP 127

[Close]
BLAST of CmoCh07G006230 vs. ExPASy TrEMBL
Match: A0A6J1GDI3 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453017 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.4e-53
Identity = 108/128 (84.38%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 55  MGCECNNNG-VIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRG 114
           MGCECNNNG VIGRSRILCATVSFL  LILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60

Query: 115 QIGSRPPKCERRCSWCAHCEAIQVPANPQ-----KSSAMKNIAYARDEASNYKPMSWKCK 174
           QIGS+PPKCERRCSWC HCEAIQVPANPQ     KSSA+KNI YARDEASNYKPMSWKCK
Sbjct: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120

Query: 175 CGSLIFNP 177
           CGSLIFNP
Sbjct: 121 CGSLIFNP 128

[Close]
BLAST of CmoCh07G006230 vs. NCBI nr
Match: XP_022963149.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 353.6 bits (906), Expect = 9.8e-94
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MKERENKRETKTKSHSYTAAIALLTSANLFCLTLFFRLFFRVLRSSAIFERKEKMGCECN 60
           MKERENKRETKTKSHSYTAAIALLTSANLFCLTLFFRLFFRVLRSSAIFERKEKMGCECN
Sbjct: 1   MKERENKRETKTKSHSYTAAIALLTSANLFCLTLFFRLFFRVLRSSAIFERKEKMGCECN 60

Query: 61  NNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPP 120
           NNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPP
Sbjct: 61  NNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPP 120

Query: 121 KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 177
           KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP
Sbjct: 121 KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 176

[Close]
BLAST of CmoCh07G006230 vs. NCBI nr
Match: KAG6594944.1 (EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64
Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0 

Query: 49  FERKEKMGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDK 108
           F  K KMGCECNNNGVIGRSRILCAT+SFLFFLILASTQMRFMAEGRSI KSGKTVSEDK
Sbjct: 91  FRTKRKMGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDK 150

Query: 109 VVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCK 168
           VVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSS +KNIAYARDEASNYKPMSWKCK
Sbjct: 151 VVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCK 210

Query: 169 CGSLIFNP 177
           CGSLIFNP
Sbjct: 211 CGSLIFNP 218

[Close]
BLAST of CmoCh07G006230 vs. NCBI nr
Match: XP_023518504.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-64
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0 

Query: 52  KEKMGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVL 111
           K KMGCECNNNGVIGRSRILCAT+SFLFFLILASTQMRFMAEGRSI KSGKTVSEDKVVL
Sbjct: 28  KRKMGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVL 87

Query: 112 RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGS 171
           RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSS MKNIAYARDEASNYKPMSWKCKCGS
Sbjct: 88  RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGS 147

Query: 172 LIFNP 177
           LIFNP
Sbjct: 148 LIFNP 152

[Close]
BLAST of CmoCh07G006230 vs. NCBI nr
Match: XP_023003266.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 4.8e-64
Identity = 123/134 (91.79%), Postives = 123/134 (91.79%), Query Frame = 0 

Query: 43  LRSSAIFERKEKMGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGK 102
           L  S     K KMGCECNNNGVIGR RILCATVSFLF LILASTQMRFMAEGRSISKSGK
Sbjct: 18  LSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGK 77

Query: 103 TVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKP 162
           TVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSS MKNIAYARDEASNYKP
Sbjct: 78  TVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKP 137

Query: 163 MSWKCKCGSLIFNP 177
           MSWKCKCGSLIFNP
Sbjct: 138 MSWKCKCGSLIFNP 151

[Close]
BLAST of CmoCh07G006230 vs. NCBI nr
Match: XP_023518506.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.5 bits (641), Expect = 5.3e-63
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 55  MGCECNNNGVIGRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 114
           MGCECNNNGVIGRSRILCAT+SFLFFLILASTQMRFMAEGRSI KSGKTVSEDKVVLRGQ
Sbjct: 1   MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQ 60

Query: 115 IGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIF 174
           IGSRPPKCERRCSWCAHCEAIQVPANPQKSS MKNIAYARDEASNYKPMSWKCKCGSLIF
Sbjct: 61  IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF 120

Query: 175 NP 177
           NP
Sbjct: 121 NP 122

[Close]
BLAST of CmoCh07G006230 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-22
Identity = 59/119 (49.58%), Postives = 72/119 (60.50%), Query Frame = 0 

Query: 78  LFFLILASTQMRFMAEGR------SISKSGKTVSEDKVVLRGQIGSRPPKCER-RCSWCA 137
           L  LIL ST    MA GR        +KSG    + K+++RG IGSRPP+CER RC  C 
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEFTKSGD--QDVKMMMRGLIGSRPPRCERVRCRSCG 71

Query: 138 HCEAIQVPANPQ------------KSSAMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 177
           HCEAIQVP NPQ             SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CmoCh07G006230 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 112 RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMK-------------NIAYARDEAS 171
           + ++GS PP C  RC+ C  C AIQVP  P +S   +             ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 172 NYKPMSWKCKCGSLIFNP 177
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CmoCh07G006230 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-08
Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 0 

Query: 106 EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSW 165
           E+ V  R +IGS+PP CE++C  C  CEAIQ P        + +I +     +NY+P  W
Sbjct: 48  EEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP-------TISSIPHLSPHYANYQPEGW 104

Query: 166 KCKC 170
           +C C
Sbjct: 108 RCHC 104

[Close]
BLAST of CmoCh07G006230 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 35/116 (30.17%), Postives = 49/116 (42.24%), Query Frame = 0 

Query: 67  RSRILCATVSFLFFLILASTQMRFMAEGRSISK------SGKTVSEDKVVLRGQIGSRPP 126
           R R L A +     L L S      A+GR I +       G  +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 127 KCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 177
            C  +C  C  C+ + VP  P  S  ++           Y P +W+CKCG+ +F P
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSMPLE-----------YYPEAWRCKCGNKLFMP 109

[Close]
BLAST of CmoCh07G006230 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 48.5 bits (114), Expect = 6.3e-06
Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 

Query: 113 GQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSL 172
           G  GS PP C  +C  C  C+A+ VP  P     ++           Y P +W+CKCG+ 
Sbjct: 55  GGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLE-----------YYPEAWRCKCGNK 107

Query: 173 IFNP 177
           +F P
Sbjct: 115 LFMP 107

The following BLAST results are available for this feature:
BLAST of CmoCh07G006230 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0684.0e-2149.58EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT53.5e-0937.18EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
C4B8C44.3e-0739.06EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q2V3I31.8e-0530.17EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LUH98.9e-0534.38EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of CmoCh07G006230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HJ944.8e-94100.00Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1KNP82.3e-6491.79Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1KLZ15.7e-6397.54Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1BSQ34.4e-5584.25Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1GDI32.4e-5384.38Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of CmoCh07G006230 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963149.19.8e-94100.00EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata][more]
KAG6594944.11.6e-6494.53EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subs... [more]
XP_023518504.12.8e-6496.80EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pep... [more]
XP_023003266.14.8e-6491.79EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima][more]
XP_023518506.15.3e-6397.54EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita pepo subsp. pep... [more]
BLAST of CmoCh07G006230 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37810.12.8e-2249.58unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G10310.12.5e-1037.18unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13898.13.0e-0839.06unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT4G14723.11.3e-0630.17BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);... [more]
AT3G22820.16.3e-0634.38allergen-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 114..176
e-value: 1.0E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR33109:SF71EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2coord: 60..176
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 60..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G006230.1CmoCh07G006230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane