CmoCh07G005610 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G005610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionSerine/threonine protein kinase
LocationCmo_Chr07: 2517927 .. 2518581 (-)
RNA-Seq ExpressionCmoCh07G005610
SyntenyCmoCh07G005610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATCGCCTTCAGTAGCGCGAAGTTTGCGGACTTGCATCAACTCACGCGCTCGAGTACGAAACATTGGTACTCGCCCACAGATGGATCATATGTTTAGGCAGAGGTGACTACGGTTGCTCAAACTTCGGGCGTATAGGAAAGCGCCACGTGTTTTTCCTTAGTCGACTTGTCGTTCTCTTTCTTTCTCATGGTCATGGGGATCTTAAAACTTTTGGATATTGGCATTGATCCGAGTGATAAATGGTAACTGCTAACCCAACCCACCGTGCCAACCAATATTCCTCCACCTTTTCCTTTCCCCATGTCTTTAAACTTGCACACCACATGCTCGATAAAATGCCCGACTGAAAAAAAGTAGAACCCAACCAATTTGAAACTGAACAACAACTCTACTGCTGCTGTTGTGAGATTGGTAAATTTGTTTATTCTGCTACTCAGCTGAAACCCACATGGAACGCTATGAGATACTCAAGGATATTGGGTCTGGGAATTTTGGTGTTGCTAAACTTGTGAGAGATAAGTGGAGTGGCGAGCTTTATGCTGTCAAGTATATTGAGAGGGGCCACAAGGTACTGTTCTATCATCTTCATAACTTCAATCCCTGTTCATCCCACAACTTTCCCAATTGGTTTACAACATCTGCTTCTTGA

mRNA sequence

ATGGATATCGCCTTCAGTAGCGCGAAGTTTGCGGACTTGCATCAACTCACGCGCTCGACTGAAACCCACATGGAACGCTATGAGATACTCAAGGATATTGGGTCTGGGAATTTTGGTGTTGCTAAACTTGTGAGAGATAAGTGGAGTGGCGAGCTTTATGCTGTCAAGTATATTGAGAGGGGCCACAAGGTACTGTTCTATCATCTTCATAACTTCAATCCCTGTTCATCCCACAACTTTCCCAATTGGTTTACAACATCTGCTTCTTGA

Coding sequence (CDS)

ATGGATATCGCCTTCAGTAGCGCGAAGTTTGCGGACTTGCATCAACTCACGCGCTCGACTGAAACCCACATGGAACGCTATGAGATACTCAAGGATATTGGGTCTGGGAATTTTGGTGTTGCTAAACTTGTGAGAGATAAGTGGAGTGGCGAGCTTTATGCTGTCAAGTATATTGAGAGGGGCCACAAGGTACTGTTCTATCATCTTCATAACTTCAATCCCTGTTCATCCCACAACTTTCCCAATTGGTTTACAACATCTGCTTCTTGA

Protein sequence

MDIAFSSAKFADLHQLTRSTETHMERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKVLFYHLHNFNPCSSHNFPNWFTTSAS
Homology
[Close]
BLAST of CmoCh07G005610 vs. ExPASy Swiss-Prot
Match: Q9M9E9 (Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana OX=3702 GN=SRK2C PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-13
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEI+KDIGSGNFGVAKLVRDK+S EL+AVK+IERG K+
Sbjct: 1  MERYEIVKDIGSGNFGVAKLVRDKFSKELFAVKFIERGQKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy Swiss-Prot
Match: Q9SMQ4 (Serine/threonine-protein kinase SRK2F OS=Arabidopsis thaliana OX=3702 GN=SRK2F PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.0e-12
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERY+IL+D+GSGNFGVAKLVR+K +GE YAVKYIERG K+
Sbjct: 1  MERYDILRDLGSGNFGVAKLVREKANGEFYAVKYIERGLKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy Swiss-Prot
Match: A2YNT8 (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica OX=39946 GN=SAPK2 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-11
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYE++KDIGSGNFGVAKLVRD  + EL+AVK+IERG K+
Sbjct: 1  MERYEVIKDIGSGNFGVAKLVRDVRTKELFAVKFIERGQKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy Swiss-Prot
Match: Q0D4J7 (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SAPK2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-11
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYE++KDIGSGNFGVAKLVRD  + EL+AVK+IERG K+
Sbjct: 1  MERYEVIKDIGSGNFGVAKLVRDVRTKELFAVKFIERGQKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy Swiss-Prot
Match: Q940H6 (Serine/threonine-protein kinase SRK2E OS=Arabidopsis thaliana OX=3702 GN=SRK2E PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.2e-11
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 25 ERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          +RYE++KDIGSGNFGVA+L+RDK S EL AVKYIERG K+
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI 58

[Close]
BLAST of CmoCh07G005610 vs. ExPASy TrEMBL
Match: A0A6J1HFQ6 (serine/threonine-protein kinase SAPK2-like OS=Cucurbita moschata OX=3662 GN=LOC111463081 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.4e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHK+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy TrEMBL
Match: A0A6J1KVH3 (serine/threonine-protein kinase SAPK2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496805 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.2e-14
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIE GHK+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIETGHKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy TrEMBL
Match: A0A6J1KLG0 (serine/threonine-protein kinase SAPK2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496805 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.2e-14
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIE GHK+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIETGHKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy TrEMBL
Match: A0A6J1IQC4 (serine/threonine-protein kinase SAPK2-like OS=Cucurbita maxima OX=3661 GN=LOC111478475 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERG K+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGQKI 41

[Close]
BLAST of CmoCh07G005610 vs. ExPASy TrEMBL
Match: A0A5A7SZ03 (Serine/threonine-protein kinase SAPK2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G001190 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERG K+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGQKI 41

[Close]
BLAST of CmoCh07G005610 vs. NCBI nr
Match: KAG6594891.1 (Serine/threonine-protein kinase SAPK2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 95.5 bits (236), Expect = 2.4e-16
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 21  ETHMERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
           ETHMERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHK+
Sbjct: 67  ETHMERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKI 110

[Close]
BLAST of CmoCh07G005610 vs. NCBI nr
Match: XP_023517734.1 (serine/threonine-protein kinase SAPK2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 3.0e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHK+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKI 41

[Close]
BLAST of CmoCh07G005610 vs. NCBI nr
Match: KAG7026857.1 (Serine/threonine-protein kinase SAPK1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 88.6 bits (218), Expect = 3.0e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHK+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKI 41

[Close]
BLAST of CmoCh07G005610 vs. NCBI nr
Match: XP_022962660.1 (serine/threonine-protein kinase SAPK2-like [Cucurbita moschata])

HSP 1 Score: 88.6 bits (218), Expect = 3.0e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHK+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKI 41

[Close]
BLAST of CmoCh07G005610 vs. NCBI nr
Match: XP_023003093.1 (serine/threonine-protein kinase SAPK2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIE GHK+
Sbjct: 1  MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIETGHKI 41

[Close]
BLAST of CmoCh07G005610 vs. TAIR 10
Match: AT1G78290.2 (Protein kinase superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 5.4e-14
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEI+KDIGSGNFGVAKLVRDK+S EL+AVK+IERG K+
Sbjct: 1  MERYEIVKDIGSGNFGVAKLVRDKFSKELFAVKFIERGQKI 41

[Close]
BLAST of CmoCh07G005610 vs. TAIR 10
Match: AT1G78290.3 (Protein kinase superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 5.4e-14
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERYEI+KDIGSGNFGVAKLVRDK+S EL+AVK+IERG K+
Sbjct: 1  MERYEIVKDIGSGNFGVAKLVRDKFSKELFAVKFIERGQKI 41

[Close]
BLAST of CmoCh07G005610 vs. TAIR 10
Match: AT4G40010.1 (SNF1-related protein kinase 2.7 )

HSP 1 Score: 71.6 bits (174), Expect = 3.5e-13
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 24 MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          MERY+IL+D+GSGNFGVAKLVR+K +GE YAVKYIERG K+
Sbjct: 1  MERYDILRDLGSGNFGVAKLVREKANGEFYAVKYIERGLKI 41

[Close]
BLAST of CmoCh07G005610 vs. TAIR 10
Match: AT4G33950.1 (Protein kinase superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 5.1e-12
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 25 ERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          +RYE++KDIGSGNFGVA+L+RDK S EL AVKYIERG K+
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI 58

[Close]
BLAST of CmoCh07G005610 vs. TAIR 10
Match: AT5G66880.1 (sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 )

HSP 1 Score: 63.5 bits (153), Expect = 9.6e-11
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 25 ERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGHKV 65
          +RY+ +KDIGSGNFGVA+L+RDK + EL AVKYIERG K+
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGDKI 59

The following BLAST results are available for this feature:
BLAST of CmoCh07G005610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9E97.6e-1382.93Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana OX=3702 GN=SRK2C P... [more]
Q9SMQ45.0e-1278.05Serine/threonine-protein kinase SRK2F OS=Arabidopsis thaliana OX=3702 GN=SRK2F P... [more]
A2YNT83.2e-1175.61Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
Q0D4J73.2e-1175.61Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q940H67.2e-1175.00Serine/threonine-protein kinase SRK2E OS=Arabidopsis thaliana OX=3702 GN=SRK2E P... [more]
BLAST of CmoCh07G005610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HFQ61.4e-1497.56serine/threonine-protein kinase SAPK2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1KVH37.2e-1495.12serine/threonine-protein kinase SAPK2-like isoform X2 OS=Cucurbita maxima OX=366... [more]
A0A6J1KLG07.2e-1495.12serine/threonine-protein kinase SAPK2-like isoform X1 OS=Cucurbita maxima OX=366... [more]
A0A6J1IQC41.2e-1395.12serine/threonine-protein kinase SAPK2-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A5A7SZ031.2e-1395.12Serine/threonine-protein kinase SAPK2 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
BLAST of CmoCh07G005610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594891.12.4e-1697.73Serine/threonine-protein kinase SAPK2, partial [Cucurbita argyrosperma subsp. so... [more]
XP_023517734.13.0e-1497.56serine/threonine-protein kinase SAPK2-like [Cucurbita pepo subsp. pepo][more]
KAG7026857.13.0e-1497.56Serine/threonine-protein kinase SAPK1 [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_022962660.13.0e-1497.56serine/threonine-protein kinase SAPK2-like [Cucurbita moschata][more]
XP_023003093.11.5e-1395.12serine/threonine-protein kinase SAPK2-like isoform X2 [Cucurbita maxima][more]
BLAST of CmoCh07G005610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G78290.25.4e-1482.93Protein kinase superfamily protein [more]
AT1G78290.35.4e-1482.93Protein kinase superfamily protein [more]
AT4G40010.13.5e-1378.05SNF1-related protein kinase 2.7 [more]
AT4G33950.15.1e-1275.00Protein kinase superfamily protein [more]
AT5G66880.19.6e-1170.00sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 8..82
e-value: 2.6E-13
score: 51.6
NoneNo IPR availablePANTHERPTHR24343SERINE/THREONINE KINASEcoord: 25..65
NoneNo IPR availablePANTHERPTHR24343:SF476SERINE/THREONINE-PROTEIN KINASE SRK2Fcoord: 25..65
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 33..56
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 15..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G005610.1CmoCh07G005610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003735 structural constituent of ribosome