CmoCh07G005530 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G005530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
LocationCmo_Chr07: 2488400 .. 2491716 (-)
RNA-Seq ExpressionCmoCh07G005530
SyntenyCmoCh07G005530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTTTCCATTTTTCTGCTGGGTGTGACTGATTTACTGTTGAATCTCAAAAGAAATCAGAAAGAAGTAATCATGTTTATGTTGATTAGATCTTAAAAAGCTACAGCAAAAAGGTATTTATTTTGGGTCTTTTGCAAAAATAATATGTGCGAGGATGTAATAGTTGGTAGGGAAAAATAGTATTAAAAAAACATGGAGAAGAACAAGGAAATACCCCCACAGCATATGTCATTAGGTAAAATCTCATCTGTACATATGAGTATACCTTATGCCTTCTTGAGAGTAGGAGTGACTGACTTACTCGATTCTATGCCTCAATGATGGACATAATATTTTTATTATGAACATCCTCTTCAACTTGAGAACCTTACAAGTTCTAATCCATCGACCTTTCGTTGAGTTATCCTTAGCATTGTATGAGCAAAACTCAATTTGTTTATAACCATAATTCTAGATCAATGAATTTATCAGATAATGTCTTCTGCTACTTTTGGCTTGGCCTGAGTTGATTTAGTTAGATTATACGAATATGTCTTTGCTTAGTCATGTCTAGTTCATGAAATCTGTACATGGAGACACACTCTGGTCTCTTGTTAGCTGCTTAGGGTAGTTAGATTATACCAATCGTTGTTTGCTTATCATATCTTGACCTCCCCAACTTGGCCTAAGTATCTAAACCTCCATCGCTTACAATTTATTTCTTTGTCGGGCCAACTCAAAAACTCAATGGCTATATACCTTCATCACTCGCTTGACTTATTGATGGTGTTTTGACAAACACCACGTTGATTCTAGTTTTGCTACTTATAGGCGGATGCTAGATCCCCACATCTACTATCATCGGGAAAATCAAGATTATACCTCTAAAAAAATAGAAAAAATGGAAGCAATGCAATTATTAATCTTAGAATTTTCAATACATTATTAGTTACAAACTCGAGAAAGGGACAAACCTCGTTTTAAGCACCTGTTCGTGCCACTATGAACAGCGTTCGAGATTCCGATATCCAAATAAAGTTTGCTTCATGATTTTTAAAGAAATTATACATTCTCCGTGAGAGCAAGGGTTTCAGAGTAGAGAGCCAAAATTCATTTCGGCATGGGTTCTCTTCCCTCGATTTCTTTCCCACTTCGTGAAAGAGTCCTACGAAGTTGAAAAAGCTAAAAGTACTCCTCTTGTGTTTTCTTCTTCTTTGGCCTTCAGAATCAGACGAGGGGTTCTGGAGTTGAGTTTGCTCACTGCGTCTCAGACTCTGTTTCTTGGAGTTTTGTAATGTTTTGGAATGGTCTGATGCATGGTTGATAATTTAGTTGACTAGTTGCCCTGCAAAAATAAATCAGCACATCTGGTGAGACAGGCGAGCAATGTGGCTGGGGACATCCGATCAAATTGATACAATACAGAGAAGATTAGCATGACCCTTACGCAAAGATACACGCACAAATTGAGAAATGTATCAAAATCAAACACTGTTTAGTGTGCTAGTGAGAATGCTGGGTTCTCAAGAGGATGAATTGTTAGATTCCACATCGGTTGTTAGATCCCAACCTCTCCATAGTAGATGCGTTTTAAAATCGTGAGGTTGACGACAATACGTAATTGATAAAAACGGACGATATTTGCTAGTGGTGGATTTCTTTTCACCTTTAACGAGCAAACACAACGTATTTTTTTTTATTATTATTATACATCATTATATTATATTTAGGATGGCTAGGATGTTTTAACATGACACTTTTTGATTCATTTTGGATCAATTAGGTGGCTACAGATCTATAGAATTTGATAATATTTTGCCCAGTTGGATGTTAGTGGGTTGTAGTACTAGGTTTTCTTTTTCCTTTTCTTGGATTTTGTAGTTAGGTTTAGGCTAAATTTGATTCTTTTAGCCGAGACATAAATATTTTCAAATACCTCATGAAGTTATAGCCAAGAGATAACTACATCTCCTTTATGAGCAACTTTGGTGCAATGAGGCATTTAAGGAAGAGTAATTGAGTAAATGCTAGTTTGGAGTTTAGTGATTCAAATCTGTGCTCGATATTCTTGAACATTGGTACATTCGTAGATGGGGAGAAGGGTTTTATGAACAAGAATAACAAATAAATTTGGTCCACAGTCAAATGTGAAATCTCGATGGTCCAATCCATCAGCTATTATTTCTTGCTTAGTTGCAAGATGAGATGAGGTAGTCGCTGCATGGCCATCAGCGCAGCGTTGAAATGTAAAATCAATGGGCAGTGAAGATTGAAGAAGAGTGAAACAAATGCAAAGTGGAGAGTAGGGGAGTAAATGCGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAATGTTGCATAGTGGAAGAATAGGGCGTCCTTTGGATGTGATGTGGATACTACTGTATTGTTCCTTTCACTGTCTGCTACACTCTGTCCTCTTACTCAGAACTTCTCTGCTTTCTCTCTTCTCTTGTTCTTGTCGGATAACTTATGACTCACCCACCCTTTCCTACCCAAATTTATGCTAACTCTCTCTCCTTTGCACTTGCCTCTATTAAATGTTCATCACTCTCTCTCTCTCTTAGTTACTTGTGGAGTGGTGTGGTGTGGTGTGTTGGGTGGAAGTGGATCAAAGTAACAGAAAAATCTGGCAACTGGGTCTTTATTGCATATGATTTTTTTACTCCTTTGCTGCAATGGATCCATGAGTTTTGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTTCATCTTCTTCTTTTTCTCTCCGCCTCTTCCCCTTCCAGGGTGTGCCTTCTTTCTCTCTTCCATGAATTTTCTCATATTGCTCGTTACTTTATTCCTGAGCTTCGTTGTTTTGGTTGCTTGCTGATTTGATCAGGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGTCATCCATGCATGGCGGTGCAAGTTCCTAGCATGCCTCGGATGGATTCGCATTCACCCTCGGCCTTGCCATTGGGATTTTTTGACTCATCCTCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCTTGAGCCATATTTGCATGTCCAAAACACAGGGTTGGTCTCCCATTCTTCTGGTTTATGTAAATGACATTGAATTGTTTCTTTTTTTCATTATAAGGATGGAATTCTTTGTTCAGAGTGAAAGCAGGTCGTTTGGTTTCTGCATTTATTGTACATAAACCTTCTACCCTTAACCCC

mRNA sequence

AAGTTTCCATTTTTCTGCTGGGTGTGACTGATTTACTGTTGAATCTCAAAAGAAATCAGAAAGAAGTAATCATGTTTATGTTGATTAGATCTTAAAAAGCTACAGCAAAAAGGTATTTATTTTGGGTCTTTTGCAAAAATAATATGTGCGAGGATGTAATAGTTGGTAGGGAAAAATAGTATTAAAAAAACATGGAGAAGAACAAGGAAATACCCCCACAGCATATGTCATTAGGTAAAATCTCATCTGTACATATGAGTATACCTTATGCCTTCTTGAGAGTAGGAGTGACTGACTTACTCGATTCTATGCCTCAATGATGGACATAATATTTTTATTATGAACATCCTCTTCAACTTGAGAACCTTACAAGTTCTAATCCATCGACCTTTCGTTGAGTTATCCTTAGCATTGTATGAGCAAAACTCAATTTGTTTATAACCATAATTCTAGATCAATGAATTTATCAGATAATGTCTTCTGCTACTTTTGGCTTGGCCTGAGTTGATTTAGTTAGATTATACGAATATGTCTTTGCTTAGTCATGTCTAGTTCATGAAATCTGTACATGGAGACACACTCTGGTCTCTTGTTAGCTGCTTAGGGTAGTTAGATTATACCAATCGTTGTTTGCTTATCATATCTTGACCTCCCCAACTTGGCCTAAGTATCTAAACCTCCATCGCTTACAATTTATTTCTTTGTCGGGCCAACTCAAAAACTCAATGGCTATATACCTTCATCACTCGCTTGACTTATTGATGGTGTTTTGACAAACACCACGTTGATTCTAGTTTTGCTACTTATAGGCGGATGCTAGATCCCCACATCTACTATCATCGGGAAAATCAAGATTATACCTCTAAAAAAATAGAAAAAATGGAAGCAATGCAATTATTAATCTTAGAATTTTCAATACATTATTAGTTACAAACTCGAGAAAGGGACAAACCTCGTTTTAAGCACCTGTTCGTGCCACTATGAACAGCGTTCGAGATTCCGATATCCAAATAAAGTTTGCTTCATGATTTTTAAAGAAATTATACATTCTCCGTGAGAGCAAGGGTTTCAGAGTAGAGAGCCAAAATTCATTTCGGCATGGGTTCTCTTCCCTCGATTTCTTTCCCACTTCGTGAAAGAGTCCTACGAAGTTGAAAAAGCTAAAAGTACTCCTCTTGTGTTTTCTTCTTCTTTGGCCTTCAGAATCAGACGAGGGGTTCTGGAGTTGAGTTTGCTCACTGCGTCTCAGACTCTGTTTCTTGGAGTTTTGTAATGTTTTGGAATGGTCTGATGCATGGTTGATAATTTAGTTGACTAGTTGCCCTGCAAAAATAAATCAGCACATCTGGTGAGACAGGCGAGCAATGTGGCTGGGGACATCCGATCAAATTGATACAATACAGAGAAGATTAGCATGACCCTTACGCAAAGATACACGCACAAATTGAGAAATGTATCAAAATCAAACACTGTTTAGTGTGCTAGTGAGAATGCTGGGTTCTCAAGAGGATGAATTGTTAGATTCCACATCGGTTGTTAGATCCCAACCTCTCCATAGTAGATGCGTTTTAAAATCGTGAGGTTGACGACAATACGTAATTGATAAAAACGGACGATATTTGCTAGTGGTGGATTTCTTTTCACCTTTAACGAGCAAACACAACGTATTTTTTTTTATTATTATTATACATCATTATATTATATTTAGGATGGCTAGGATGTTTTAACATGACACTTTTTGATTCATTTTGGATCAATTAGGTGGCTACAGATCTATAGAATTTGATAATATTTTGCCCAGTTGGATGTTAGTGGGTTGTAGTACTAGGTTTTCTTTTTCCTTTTCTTGGATTTTGTAGTTAGGTTTAGGCTAAATTTGATTCTTTTAGCCGAGACATAAATATTTTCAAATACCTCATGAAGTTATAGCCAAGAGATAACTACATCTCCTTTATGAGCAACTTTGGTGCAATGAGGCATTTAAGGAAGAGTAATTGAGTAAATGCTAGTTTGGAGTTTAGTGATTCAAATCTGTGCTCGATATTCTTGAACATTGGTACATTCGTAGATGGGGAGAAGGGTTTTATGAACAAGAATAACAAATAAATTTGGTCCACAGTCAAATGTGAAATCTCGATGGTCCAATCCATCAGCTATTATTTCTTGCTTAGTTGCAAGATGAGATGAGGTAGTCGCTGCATGGCCATCAGCGCAGCGTTGAAATGTAAAATCAATGGGCAGTGAAGATTGAAGAAGAGTGAAACAAATGCAAAGTGGAGAGTAGGGGAGTAAATGCGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAATGTTGCATAGTGGAAGAATAGGGCGTCCTTTGGATGTGATGTGGATACTACTGTATTGTTCCTTTCACTGTCTGCTACACTCTGTCCTCTTACTCAGAACTTCTCTGCTTTCTCTCTTCTCTTGTTCTTGTCGGATAACTTATGACTCACCCACCCTTTCCTACCCAAATTTATGCTAACTCTCTCTCCTTTGCACTTGCCTCTATTAAATGTTCATCACTCTCTCTCTCTCTTAGTTACTTGTGGAGTGGTGTGGTGTGGTGTGTTGGGTGGAAGTGGATCAAAGTAACAGAAAAATCTGGCAACTGGGTCTTTATTGCATATGATTTTTTTACTCCTTTGCTGCAATGGATCCATGAGTTTTGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTTCATCTTCTTCTTTTTCTCTCCGCCTCTTCCCCTTCCAGGGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGTCATCCATGCATGGCGGTGCAAGTTCCTAGCATGCCTCGGATGGATTCGCATTCACCCTCGGCCTTGCCATTGGGATTTTTTGACTCATCCTCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCTTGAGCCATATTTGCATGTCCAAAACACAGGGTTGGTCTCCCATTCTTCTGGTTTATGTAAATGACATTGAATTGTTTCTTTTTTTCATTATAAGGATGGAATTCTTTGTTCAGAGTGAAAGCAGGTCGTTTGGTTTCTGCATTTATTGTACATAAACCTTCTACCCTTAACCCC

Coding sequence (CDS)

ATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTTCATCTTCTTCTTTTTCTCTCCGCCTCTTCCCCTTCCAGGGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGTCATCCATGCATGGCGGTGCAAGTTCCTAGCATGCCTCGGATGGATTCGCATTCACCCTCGGCCTTGCCATTGGGATTTTTTGACTCATCCTCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCTTGA

Protein sequence

MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Homology
[Close]
BLAST of CmoCh07G005530 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18
Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 0 

Query: 11  ATSLLIVLLHLLL-------FLSASSP---SRGIFFEDKTRLGSTPPSCHNKCNECHPCM 70
           +T LL+ L+ +LL       FL    P    +    EDK RLGSTPPSCHN+CN CHPCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMP-RMDSHSPSALPLGFFDSSSQ----GNRYSFYKPLGWKCRCGNHFFNP 112
           A+QVP++P R      +    GF    S      ++YS YKP+GWKC C  HF+NP
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CmoCh07G005530 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.4e-09
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 0 

Query: 42  LGSTPPSCHN-KCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSS-----SQGNRYSFY 101
           +GS PP C   +C  C  C A+QVP+ P+   HSP          +     ++G+  + Y
Sbjct: 53  IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNY 112

Query: 102 KPLGWKCRCGNHFFNP 112
           KP+ WKC+CGN  +NP
Sbjct: 113 KPMSWKCKCGNSIYNP 128

[Close]
BLAST of CmoCh07G005530 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 24/66 (36.36%), Postives = 33/66 (50.00%), Query Frame = 0 

Query: 39  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPL 98
           + R+GS PPSC  KC  C PC A+Q P++  +   SP                Y+ Y+P 
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSP---------------HYANYQPE 104

Query: 99  GWKCRC 105
           GW+C C
Sbjct: 114 GWRCHC 104

[Close]
BLAST of CmoCh07G005530 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04
Identity = 24/70 (34.29%), Postives = 31/70 (44.29%), Query Frame = 0 

Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPLGWK 101
           LGS+PP C +KC  C PC  V VP         P   P+            + Y P  W+
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVP--------VPPGTPV-----------TAEYYPEAWR 156

Query: 102 CRCGNHFFNP 112
           C+CGN  + P
Sbjct: 166 CKCGNKLYMP 156

[Close]
BLAST of CmoCh07G005530 vs. ExPASy TrEMBL
Match: A0A0A0KGR1 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0 

Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLLIVLLHLLL LSASSP RG+FFEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMP   S   SPSALP+ FFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]
BLAST of CmoCh07G005530 vs. ExPASy TrEMBL
Match: A0A1S3B112 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.8e-50
Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0 

Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLLIVLLHLLL LSASSP RGIFFEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMP   S   S SALP+ FFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]
BLAST of CmoCh07G005530 vs. ExPASy TrEMBL
Match: A0A5A7T0A6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002950 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-35
Identity = 72/81 (88.89%), Postives = 73/81 (90.12%), Query Frame = 0 

Query: 33  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRMDSH--SPSALPLGFFDSSSQGN 92
           GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMP   S   S SALP+ FFDSSSQGN
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 93  RYSFYKPLGWKCRCGNHFFNP 112
           RYSFYKPLGWKCRCGNHFFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

[Close]
BLAST of CmoCh07G005530 vs. ExPASy TrEMBL
Match: A0A5J5AJK4 (Epidermal patterning factor-like protein OS=Nyssa sinensis OX=561372 GN=F0562_005546 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.8e-29
Identity = 68/113 (60.18%), Postives = 83/113 (73.45%), Query Frame = 0 

Query: 12  TSLLIVLLHLL----LFLSASSPS---RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQV 71
           T+++I+L+HLL     F     PS   RGI FEDKTRLGSTPPSCHNKCN+CHPCMAVQV
Sbjct: 12  TTIVIILIHLLSPSTCFSHQEHPSASTRGILFEDKTRLGSTPPSCHNKCNQCHPCMAVQV 71

Query: 72  PSMPRMDSHSPS---ALPLGFFDS---SSQGNRYSFYKPLGWKCRCGNHFFNP 112
           P++P  +   P    ++P+ +FDS   SS GN+YS YKPLGWKCRC +HFFNP
Sbjct: 72  PTLPSHNRVQPGLTRSIPMDYFDSSSPSSAGNKYSNYKPLGWKCRCDDHFFNP 124

[Close]
BLAST of CmoCh07G005530 vs. ExPASy TrEMBL
Match: A0A6J5XNY8 (Epidermal patterning factor-like protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39015 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 0 

Query: 16  IVLLHLLLFLSASSPS----RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMP--- 75
           I+LLH LL   AS  S    RG+ FE+KTRLGSTPPSCHNKCN+CHPCMAVQVP++P   
Sbjct: 15  IMLLHFLLLSPASCFSTHSLRGLLFEEKTRLGSTPPSCHNKCNQCHPCMAVQVPTIPSHD 74

Query: 76  RMDSHSPSALPLGFFDSSSQG--NRYSFYKPLGWKCRCGNHFFNP 112
           R+++    + P+ FFD S  G  N+YS YKPLGWKC CG+HFFNP
Sbjct: 75  RVETGMTRSFPMMFFDPSHPGTNNKYSNYKPLGWKCHCGDHFFNP 119

[Close]
BLAST of CmoCh07G005530 vs. NCBI nr
Match: KGN48738.1 (hypothetical protein Csa_003101 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 4.2e-50
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0 

Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLLIVLLHLLL LSASSP RG+FFEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMP   S   SPSALP+ FFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]
BLAST of CmoCh07G005530 vs. NCBI nr
Match: XP_008440584.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 1.6e-49
Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0 

Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLLIVLLHLLL LSASSP RGIFFEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMP   S   S SALP+ FFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]
BLAST of CmoCh07G005530 vs. NCBI nr
Match: KAG6604039.1 (EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034205.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190.3 bits (482), Expect = 9.1e-45
Identity = 93/113 (82.30%), Postives = 96/113 (84.96%), Query Frame = 0 

Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLL+VL+HLL  LSAS P  GI FEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMPR      SPSALP+ FFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 113

[Close]
BLAST of CmoCh07G005530 vs. NCBI nr
Match: KAA0036313.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 3.8e-35
Identity = 72/81 (88.89%), Postives = 73/81 (90.12%), Query Frame = 0 

Query: 33  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRMDSH--SPSALPLGFFDSSSQGN 92
           GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMP   S   S SALP+ FFDSSSQGN
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 93  RYSFYKPLGWKCRCGNHFFNP 112
           RYSFYKPLGWKCRCGNHFFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

[Close]
BLAST of CmoCh07G005530 vs. NCBI nr
Match: KAA8530830.1 (hypothetical protein F0562_005546 [Nyssa sinensis])

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28
Identity = 68/113 (60.18%), Postives = 83/113 (73.45%), Query Frame = 0 

Query: 12  TSLLIVLLHLL----LFLSASSPS---RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQV 71
           T+++I+L+HLL     F     PS   RGI FEDKTRLGSTPPSCHNKCN+CHPCMAVQV
Sbjct: 12  TTIVIILIHLLSPSTCFSHQEHPSASTRGILFEDKTRLGSTPPSCHNKCNQCHPCMAVQV 71

Query: 72  PSMPRMDSHSPS---ALPLGFFDS---SSQGNRYSFYKPLGWKCRCGNHFFNP 112
           P++P  +   P    ++P+ +FDS   SS GN+YS YKPLGWKCRC +HFFNP
Sbjct: 72  PTLPSHNRVQPGLTRSIPMDYFDSSSPSSAGNKYSNYKPLGWKCRCDDHFFNP 124

[Close]
BLAST of CmoCh07G005530 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 8.3e-20
Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 0 

Query: 11  ATSLLIVLLHLLL-------FLSASSP---SRGIFFEDKTRLGSTPPSCHNKCNECHPCM 70
           +T LL+ L+ +LL       FL    P    +    EDK RLGSTPPSCHN+CN CHPCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMP-RMDSHSPSALPLGFFDSSSQ----GNRYSFYKPLGWKCRCGNHFFNP 112
           A+QVP++P R      +    GF    S      ++YS YKP+GWKC C  HF+NP
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CmoCh07G005530 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 5.9e-10
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 0 

Query: 42  LGSTPPSCHN-KCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSS-----SQGNRYSFY 101
           +GS PP C   +C  C  C A+QVP+ P+   HSP          +     ++G+  + Y
Sbjct: 53  IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNY 112

Query: 102 KPLGWKCRCGNHFFNP 112
           KP+ WKC+CGN  +NP
Sbjct: 113 KPMSWKCKCGNSIYNP 128

[Close]
BLAST of CmoCh07G005530 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 53.9 bits (128), Expect = 9.5e-08
Identity = 24/66 (36.36%), Postives = 33/66 (50.00%), Query Frame = 0 

Query: 39  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPL 98
           + R+GS PPSC  KC  C PC A+Q P++  +   SP                Y+ Y+P 
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSP---------------HYANYQPE 104

Query: 99  GWKCRC 105
           GW+C C
Sbjct: 114 GWRCHC 104

[Close]
BLAST of CmoCh07G005530 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 47.4 bits (111), Expect = 8.9e-06
Identity = 24/70 (34.29%), Postives = 31/70 (44.29%), Query Frame = 0 

Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPLGWK 101
           LGS+PP C +KC  C PC  V VP         P   P+            + Y P  W+
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVP--------VPPGTPV-----------TAEYYPEAWR 230

Query: 102 CRCGNHFFNP 112
           C+CGN  + P
Sbjct: 240 CKCGNKLYMP 230

[Close]
BLAST of CmoCh07G005530 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 47.4 bits (111), Expect = 8.9e-06
Identity = 24/70 (34.29%), Postives = 31/70 (44.29%), Query Frame = 0 

Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPLGWK 101
           LGS+PP C +KC  C PC  V VP         P   P+            + Y P  W+
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVP--------VPPGTPV-----------TAEYYPEAWR 156

Query: 102 CRCGNHFFNP 112
           C+CGN  + P
Sbjct: 166 CKCGNKLYMP 156

The following BLAST results are available for this feature:
BLAST of CmoCh07G005530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LFT51.2e-1845.69EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9T0688.4e-0936.84EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
C4B8C41.3e-0636.36EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q1PEY61.2e-0434.29EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of CmoCh07G005530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGR12.0e-5089.38Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499... [more]
A0A1S3B1127.8e-5089.38Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960... [more]
A0A5A7T0A61.9e-3588.89Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5J5AJK45.8e-2960.18Epidermal patterning factor-like protein OS=Nyssa sinensis OX=561372 GN=F0562_00... [more]
A0A6J5XNY81.1e-2761.90Epidermal patterning factor-like protein OS=Prunus armeniaca OX=36596 GN=CURHAP_... [more]
BLAST of CmoCh07G005530 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48738.14.2e-5089.38hypothetical protein Csa_003101 [Cucumis sativus][more]
XP_008440584.11.6e-4989.38PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo][more]
KAG6604039.19.1e-4582.30EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subs... [more]
KAA0036313.13.8e-3588.89EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707.... [more]
KAA8530830.11.2e-2860.18hypothetical protein F0562_005546 [Nyssa sinensis][more]
BLAST of CmoCh07G005530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10310.18.3e-2045.69unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G37810.15.9e-1036.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13898.19.5e-0836.36unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT2G30370.18.9e-0634.29allergen-related [more]
AT2G30370.28.9e-0634.29allergen-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 41..111
e-value: 7.6E-22
score: 77.0
NoneNo IPR availablePANTHERPTHR33109:SF3EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1coord: 10..111
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 10..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G005530.1CmoCh07G005530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane