CmoCh07G005100 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G005100
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionTranslation initiation factor IF-2, putative isoform 1
LocationCmo_Chr07: 2328174 .. 2330628 (-)
RNA-Seq ExpressionCmoCh07G005100
SyntenyCmoCh07G005100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTTCCCCACGTCTTAACTCGCTCCTCGCCCGGAGCGGAAGAGGAGGACATCACCTATTTCGCGGCGGTACACCGGCACGGTTTAGTCCTATATTCCTGTCTCCAGTGGTTAGCTTTCGTCAAGTTTTGGAAACCAATTGGTAGGAATTCAGGTTATTTAGACTTTGATTTGTATTTGTTTATGTCAATTATCACTGCGAACTCCAATTACTGTCATTATGCACTACATCTAGGGGTTTGGAAGTTTTTGATCTGTTTTCAATTTATGAAAATCCAGTGACGAAGTGTTTGGATTCGTTTAAGAATGCCGCACAGTGAGTAGTCCAGAAGATTCAAGAGAGACTTGTTGCGGAACATGGCGAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCTAGCCCTAGGGAAAAAGAAAAGGACGAAGCAGAAAATGAGTTAAAAAGTGAGGAGCAAGAACCTTTGGTCTCTGACGAGGACGGTATGTTGAAATTGATTCTTATTTTCCGAAGCCTGAACTTATTTTTGGGAAGGAAAATTGTTTTGCGTCTCTTTCAATGACAATTGTTCATTGAATTTATATTTTTCCGCTGCTTTTGCCTTCATTTGTGTATAGTTGAACGACATGCTGCTGCAATTCGCGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAATTGCGCTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCAAGGAGAAACTTCCAAACTTGTCCATTTCTGGAAAAGGCGAAGTAGGAGAAATTGAAGTACAGTGGAAGGAAACTGAAAGTGAATTACGCGCCAATCCAGTTGATGGAATGGATGTACACGCTTCTCTCTTACAGCGTCTGTCCATAGCTTATCCTAACTACTCTGCTGGAATGCGATCTTTAAATGGATTTGAATTTTCCAGTAAATCAGGTATATGTAGATTGTGGATTATGGTGCATAAAACGAACTGCTAAGATGCTCCCTTATTTGATGCTTGTTTGCTGCAACTCACCGTATTTTCTCTACTGGTGGCAGTGAAAACCAATCCTTTCAATGTTGAGAGCCTGCAAATTCCGAGCTTGGTAAGTAATTTTGCGTTTGATACCTTAAACTCTTTACTTCGAATTCTCTTCTTTAGATCAGTAAAATGAATGATACCATGTGAGCTCACAAAATTTGTTTTAGTTTGTCTATGTCTATTGTTTCATGTTGTTTATTTGGTGAAGCTGAAGATTGTCCTCTCGTCGGATGGTCATTCATAAGAAGATGCTCGGTATTGACTGATATATTTATTGATAATTCCTGCATTTTAGGTTTTGGAGGCAGAGCCCTCGGATAGTATGATGCTTGGAATGACAGATATTCTCCAAACTCCTGGGGTTAGAACTTCACGTTTTTGCACACCACTTATTGCATTAACTTCGTCTTGTTAATACCCTAGAGTTGTCTGTTATTGGTATTTTCCAGTATTTGTTACATTGTTGTTGACTCAAATCTAGGTACATAGTGGTGGTCTTGGTCAAAGGAACAAAGTTACTGTATTGGTAGCGTCTGTTTTCCATTATTCATTTTTATTTTTATGTTCTATGCTTATCTCATTTCAATATATATAAGAAACAATTTGATTGACAGAATGAAATTTAGAAAACAATTCAGGGAAAGTCTTGACCGGAGGTGCAAAAATGAATTGCAACGAGTACAAAAGTTAGTAAGGCTATGACTAGAAAACAGCTTGAAGTTTATTACACTCAGCTTCGCGAGGTCTCATGGGGAATTGTTTCAAAAAAGTCTTCTTTATCTCTTTTGAAAAAGATCGAGTAACATGTTTTGATAATTGTTTCTAAGAGTCTAATTTTGCTTTTATTTAGTGTATTCTACAATAAGCTAACTAGTTCTGCTTTCATAGGTAAGTAACCAAAGATTGTCCATTGGAATGACACCGAGAACCCGAAGGCTTCCAAAGCCCGGTGAGATGCTTGTATCTATACACGGATCCCCCCTTGGTGTTTATAAGGAAGACAACATGGAAGCAATACATGGTACGTACATATAGGTCATATGTAGACAATGGAGCGTTTCGACGCTTTAATTTGGAACTGTGAATATGTAGGCCAAATAAGTTGGTGGGTATATATACATTTATCATACTTCTGCATGTTTCTAATACATAAATTAATGTGCAGAATCAGATGAGGATTGATTAGCTCTGATTTGAGGCCACTTGACAGCTTGTCGAATGTAAAATTTCAAATTTCTATCTACCTTTTTGTATTGTATCCAACATTTTGATTACTTTCATATTAAGAGCGACTCGTACAAGGTGTATAACTAATTTTAGTGTTACTTTACTCAAAGAAACGAGTTAAAGGTTATGATATCTGGTTTAATTTGATTGCTTTTTATATGATCATCCCGTTTTTACCATATGCATCC

mRNA sequence

GATTTTCCCCACGTCTTAACTCGCTCCTCGCCCGGAGCGGAAGAGGAGGACATCACCTATTTCGCGGCGGTACACCGGCACGGTTTAGTCCTATATTCCTGTCTCCAGTGGTTAGCTTTCGTCAAGTTTTGGAAACCAATTGTGACGAAGTGTTTGGATTCGTTTAAGAATGCCGCACAGTGAGTAGTCCAGAAGATTCAAGAGAGACTTGTTGCGGAACATGGCGAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCTAGCCCTAGGGAAAAAGAAAAGGACGAAGCAGAAAATGAGTTAAAAAGTGAGGAGCAAGAACCTTTGGTCTCTGACGAGGACGTTGAACGACATGCTGCTGCAATTCGCGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAATTGCGCTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCAAGGAGAAACTTCCAAACTTGTCCATTTCTGGAAAAGGCGAAGTAGGAGAAATTGAAGTACAGTGGAAGGAAACTGAAAGTGAATTACGCGCCAATCCAGTTGATGGAATGGATGTACACGCTTCTCTCTTACAGCGTCTGTCCATAGCTTATCCTAACTACTCTGCTGGAATGCGATCTTTAAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACCAATCCTTTCAATGTTGAGAGCCTGCAAATTCCGAGCTTGGTTTTGGAGGCAGAGCCCTCGGATAGTATGATGCTTGGAATGACAGATATTCTCCAAACTCCTGGGGTAAGTAACCAAAGATTGTCCATTGGAATGACACCGAGAACCCGAAGGCTTCCAAAGCCCGGTGAGATGCTTGTATCTATACACGGATCCCCCCTTGGTGTTTATAAGGAAGACAACATGGAAGCAATACATGAATCAGATGAGGATTGATTAGCTCTGATTTGAGGCCACTTGACAGCTTGTCGAATGTAAAATTTCAAATTTCTATCTACCTTTTTGTATTGTATCCAACATTTTGATTACTTTCATATTAAGAGCGACTCGTACAAGGTGTATAACTAATTTTAGTGTTACTTTACTCAAAGAAACGAGTTAAAGGTTATGATATCTGGTTTAATTTGATTGCTTTTTATATGATCATCCCGTTTTTACCATATGCATCC

Coding sequence (CDS)

ATGGCGAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCTAGCCCTAGGGAAAAAGAAAAGGACGAAGCAGAAAATGAGTTAAAAAGTGAGGAGCAAGAACCTTTGGTCTCTGACGAGGACGTTGAACGACATGCTGCTGCAATTCGCGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAATTGCGCTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCAAGGAGAAACTTCCAAACTTGTCCATTTCTGGAAAAGGCGAAGTAGGAGAAATTGAAGTACAGTGGAAGGAAACTGAAAGTGAATTACGCGCCAATCCAGTTGATGGAATGGATGTACACGCTTCTCTCTTACAGCGTCTGTCCATAGCTTATCCTAACTACTCTGCTGGAATGCGATCTTTAAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACCAATCCTTTCAATGTTGAGAGCCTGCAAATTCCGAGCTTGGTTTTGGAGGCAGAGCCCTCGGATAGTATGATGCTTGGAATGACAGATATTCTCCAAACTCCTGGGGTAAGTAACCAAAGATTGTCCATTGGAATGACACCGAGAACCCGAAGGCTTCCAAAGCCCGGTGAGATGCTTGTATCTATACACGGATCCCCCCTTGGTGTTTATAAGGAAGACAACATGGAAGCAATACATGAATCAGATGAGGATTGA

Protein sequence

MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGMDVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED
Homology
[Close]
BLAST of CmoCh07G005100 vs. ExPASy TrEMBL
Match: A0A6J1HHY4 (uncharacterized protein LOC111463139 OS=Cucurbita moschata OX=3662 GN=LOC111463139 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.0e-123
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60
           MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI
Sbjct: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60

Query: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120
           TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM
Sbjct: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120

Query: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180
           DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM
Sbjct: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180

Query: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240
           LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED
Sbjct: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240

[Close]
BLAST of CmoCh07G005100 vs. ExPASy TrEMBL
Match: A0A6J1KR76 (uncharacterized protein LOC111496903 OS=Cucurbita maxima OX=3661 GN=LOC111496903 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120
Identity = 235/240 (97.92%), Postives = 235/240 (97.92%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60
           MARRKAKK VKKSSPREKEKDEAENELKSEEQ PLVSDEDVERHAAAIRAIRDVEIERLI
Sbjct: 1   MARRKAKKIVKKSSPREKEKDEAENELKSEEQAPLVSDEDVERHAAAIRAIRDVEIERLI 60

Query: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120
           TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGK EVGEIEVQWKETESELRANPVDGM
Sbjct: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKSEVGEIEVQWKETESELRANPVDGM 120

Query: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180
           DVHASLL RLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM
Sbjct: 121 DVHASLLHRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180

Query: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240
           LGMTDILQTPG SNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED
Sbjct: 181 LGMTDILQTPGASNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240

[Close]
BLAST of CmoCh07G005100 vs. ExPASy TrEMBL
Match: A0A6J1BYE7 (uncharacterized protein LOC111005854 OS=Momordica charantia OX=3673 GN=LOC111005854 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.7e-98
Identity = 200/239 (83.68%), Postives = 211/239 (88.28%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60
           MARRKAKKT KK SP      EAENE K EEQ PLVS+EDVERHAAAIRAIRDVEIERLI
Sbjct: 1   MARRKAKKTAKKLSPSPVR--EAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIERLI 60

Query: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120
           TELRLLRSYFNKEQLQTP+LQFF+EKLPNLSIS  GE GEIEVQWK+   EL   P DG+
Sbjct: 61  TELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPADGI 120

Query: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180
           D+HASLL RLSIAYPN SAGM+S+NGFEFSSKSVKTN FNVE+LQIPS VLE EPSDSMM
Sbjct: 121 DIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLE-EPSDSMM 180

Query: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDE 240
           LGM DILQTPGV NQRLSIGMTP+TRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHES+E
Sbjct: 181 LGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 236

[Close]
BLAST of CmoCh07G005100 vs. ExPASy TrEMBL
Match: A0A6J1ILD3 (uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.8e-97
Identity = 196/242 (80.99%), Postives = 216/242 (89.26%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPR--EKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+VKKSSP    + KD + NELKSE+Q  LVSDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120
           LITELRLLRSYFNKEQLQTPLLQFF EKLP+LSIS +GE GEIEVQWK+TE EL  NP D
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFVEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GMDVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180
           G+D+HASLL RLS AYPN SAG+RS NGFEFSSKSVKTNPFNVE+LQIP+ VLE EPSD+
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGIRSFNGFEFSSKSVKTNPFNVENLQIPNFVLE-EPSDN 180

Query: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD 240
           M+LGM D+LQTPG SNQRLSIGMTP+TRRLPKPGE++VSIHGSPLGVY+E NMEAIHES+
Sbjct: 181 MVLGMPDLLQTPGASNQRLSIGMTPKTRRLPKPGEVIVSIHGSPLGVYREYNMEAIHESE 240

[Close]
BLAST of CmoCh07G005100 vs. ExPASy TrEMBL
Match: A0A1S4DWB9 (uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.7e-94
Identity = 194/241 (80.50%), Postives = 212/241 (87.97%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPR--EKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKTVKKSSP      KDEA +++K+       SDEDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTH------SDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120
           LITELRLLRSYFNKEQLQTPLLQFF+EKLP+LSIS +G+ GEIEVQWK+TE EL  NP D
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GMDVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180
           G+D+HASLL RLS AYP  SAGMRS NGFEFSSKSVKTNPFN E+LQIP+ VLE EPSD+
Sbjct: 121 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLE-EPSDN 180

Query: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD 240
           M+LGM DILQTPG+SNQRLSIGMTP+TRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHES+
Sbjct: 181 MVLGMPDILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESE 234

[Close]
BLAST of CmoCh07G005100 vs. NCBI nr
Match: XP_022962735.1 (uncharacterized protein LOC111463139 [Cucurbita moschata] >XP_022962736.1 uncharacterized protein LOC111463139 [Cucurbita moschata] >XP_022962737.1 uncharacterized protein LOC111463139 [Cucurbita moschata] >XP_022962739.1 uncharacterized protein LOC111463139 [Cucurbita moschata] >XP_022962740.1 uncharacterized protein LOC111463139 [Cucurbita moschata])

HSP 1 Score: 451.1 bits (1159), Expect = 6.2e-123
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60
           MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI
Sbjct: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60

Query: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120
           TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM
Sbjct: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120

Query: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180
           DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM
Sbjct: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180

Query: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240
           LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED
Sbjct: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240

[Close]
BLAST of CmoCh07G005100 vs. NCBI nr
Match: XP_023003233.1 (uncharacterized protein LOC111496903 [Cucurbita maxima] >XP_023003234.1 uncharacterized protein LOC111496903 [Cucurbita maxima] >XP_023003235.1 uncharacterized protein LOC111496903 [Cucurbita maxima] >XP_023003236.1 uncharacterized protein LOC111496903 [Cucurbita maxima])

HSP 1 Score: 440.7 bits (1132), Expect = 8.4e-120
Identity = 235/240 (97.92%), Postives = 235/240 (97.92%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60
           MARRKAKK VKKSSPREKEKDEAENELKSEEQ PLVSDEDVERHAAAIRAIRDVEIERLI
Sbjct: 1   MARRKAKKIVKKSSPREKEKDEAENELKSEEQAPLVSDEDVERHAAAIRAIRDVEIERLI 60

Query: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120
           TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGK EVGEIEVQWKETESELRANPVDGM
Sbjct: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKSEVGEIEVQWKETESELRANPVDGM 120

Query: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180
           DVHASLL RLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM
Sbjct: 121 DVHASLLHRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180

Query: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240
           LGMTDILQTPG SNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED
Sbjct: 181 LGMTDILQTPGASNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240

[Close]
BLAST of CmoCh07G005100 vs. NCBI nr
Match: XP_023518319.1 (uncharacterized protein LOC111781838 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 235/240 (97.92%), Postives = 237/240 (98.75%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60
           MARRKAKKTVKK+SPREKEKDEAENELKSEEQ PLVSDEDVERHAAAIRAIRDVEIERLI
Sbjct: 1   MARRKAKKTVKKTSPREKEKDEAENELKSEEQAPLVSDEDVERHAAAIRAIRDVEIERLI 60

Query: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120
           TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQ KETESELRANP+DGM
Sbjct: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQRKETESELRANPIDGM 120

Query: 121 DVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180
           DVHASLL RLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM
Sbjct: 121 DVHASLLHRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSMM 180

Query: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240
           LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED
Sbjct: 181 LGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESDED 240

[Close]
BLAST of CmoCh07G005100 vs. NCBI nr
Match: KAG6594850.1 (hypothetical protein SDJN03_11403, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 437.6 bits (1124), Expect = 7.1e-119
Identity = 236/242 (97.52%), Postives = 236/242 (97.52%), Query Frame = 0 

Query: 1   MARRKAKKTVKKS--SPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKTVK S  SPREK KDEAENELKSEEQ PLVSDEDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKNSSPSPREKAKDEAENELKSEEQAPLVSDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120
           LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120

Query: 121 GMDVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180
           GMDVHASLL RLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS
Sbjct: 121 GMDVHASLLHRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180

Query: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD 240
           MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD
Sbjct: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD 240

[Close]
BLAST of CmoCh07G005100 vs. NCBI nr
Match: KAG7026813.1 (hypothetical protein SDJN02_10820, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 230/237 (97.05%), Postives = 230/237 (97.05%), Query Frame = 0 

Query: 1   MARRKAKKTVKKS--SPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKTVK S  SPREK KDEAENELKSEEQ PLV DEDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKNSSPSPREKAKDEAENELKSEEQAPLVPDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120
           LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120

Query: 121 GMDVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180
           GMDVHASLL RLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS
Sbjct: 121 GMDVHASLLHRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180

Query: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 236
           MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 237

[Close]
BLAST of CmoCh07G005100 vs. TAIR 10
Match: AT4G39630.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-49
Identity = 120/240 (50.00%), Postives = 170/240 (70.83%), Query Frame = 0 

Query: 1   MARRKAKKTVKKSSPREKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIERLI 60
           M +RKAK+ VK +   E+++++ E  ++ EE++    DE+VER  AAIRAIRDVEIE+++
Sbjct: 1   MPKRKAKECVKLT---EEDRND-EKRIRIEEKKEDFVDEEVERQIAAIRAIRDVEIEQML 60

Query: 61  TELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVDGM 120
           T LRLLRSYF +EQL TP+L FFKE LP+LSIS   E GEIE++W++   +  A   +G+
Sbjct: 61  TALRLLRSYFTEEQLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNENGV 120

Query: 121 DVHASLLQRLSIAYPN-YSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDSM 180
           D++ S+L+RLS+ + + YS    SL G++    +VK N    ++ Q+ +LV +   S++ 
Sbjct: 121 DMNYSILKRLSMRFTDLYSRS--SLGGYDLPD-NVKANLLGTDNPQLDNLVFQG-TSENQ 180

Query: 181 MLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKED-NMEAIHESD 239
           ML   D  QTPGV+ QRLS GMTP+T RLPK GEM++S+HGSPLGVYKED NM AI+E +
Sbjct: 181 MLPGHDAFQTPGVNGQRLSFGMTPKTLRLPKAGEMMLSVHGSPLGVYKEDHNMGAINEEN 232

The following BLAST results are available for this feature:
BLAST of CmoCh07G005100 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G005100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HHY43.0e-123100.00uncharacterized protein LOC111463139 OS=Cucurbita moschata OX=3662 GN=LOC1114631... [more]
A0A6J1KR764.0e-12097.92uncharacterized protein LOC111496903 OS=Cucurbita maxima OX=3661 GN=LOC111496903... [more]
A0A6J1BYE75.7e-9883.68uncharacterized protein LOC111005854 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1ILD34.8e-9780.99uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496... [more]
A0A1S4DWB91.7e-9480.50uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=... [more]
BLAST of CmoCh07G005100 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962735.16.2e-123100.00uncharacterized protein LOC111463139 [Cucurbita moschata] >XP_022962736.1 unchar... [more]
XP_023003233.18.4e-12097.92uncharacterized protein LOC111496903 [Cucurbita maxima] >XP_023003234.1 uncharac... [more]
XP_023518319.11.4e-11997.92uncharacterized protein LOC111781838 [Cucurbita pepo subsp. pepo][more]
KAG6594850.17.1e-11997.52hypothetical protein SDJN03_11403, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026813.11.2e-11597.05hypothetical protein SDJN02_10820, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh07G005100 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39630.12.8e-4950.00unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR37248TRANSLATION INITIATION FACTORcoord: 1..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G005100.1CmoCh07G005100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
molecular_function GO:0003743 translation initiation factor activity