CmoCh07G003670 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGACAAACCGTTGAAATCCGTGCCAACTTCCTCTGTTTCTCTCTCTCTCTCTCTCTCTTTCTTCTTCTCTACATCCTTTTCGCCGTCTAGTTCTTGGAAAGGGATTGGAGGCTCGATTTAGTAATTCAATGCCCCAACAGATTTCATCTTCTCTTTTGTATCTCTAGAAAATTTGGACACCAAAATTCATCGTTTCTTTCCGGTGTTGACTGATTTTCACTTTCAGCATTTCTTTTGGCGATTTGGAAGGTTATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCATGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGTGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTTACTCAACTCGGTGGTGCTAACAGTCAGTACTCTTACCTCTTCTTCTTCTTCTTCTTCTTTTTTACTTCAATGAATCGATTTTTGTTTGCTTTGGTAATGTTTTGCTGAGCTTTTATTCTCATGCATCTGGATTTTTAGTACCTATTATTGGCACTATTTACTCTAGGATTTTCATTTTAAGCTCTCTTGGATTAGGAGACCTGGCTATTGCGTTGAAATGAATTGTGTTCCGTCAGGGTCAAGCACTGGAACGCCTACATTTTAGTACCGGTTTTCGAATAACAATGTAAACGGTGAGTTTGATGTTTGGAGCTTCAATAATTCGGGGATATTGTTGAAAGATTCCCCTTCCATGAAGAGCATCCAGTATTTGGGCTGGTATAAAATGTATAAATTACATAGCTTATGGCTAATGAACCCAAAAGAAAAGAACATGGGACTAGACTTTAGACAAATGGGATGGGAGGTCAGGCTCAGTTATTCCAGAGTAATTAAATTCGGAAGTTCAGCTAGTTTCTATTGCTTGGTTTCAGGAATATTGTGAGATTACATAGCTTGAGTGCTTTAAAGAATGTTCATAAATGATTATTGTCAGGGGAGTTTGTGCTTATAAATGGCTCATAAATTGAGTAGATTTAGAAAGTGGAGGGGTGATCTTGATGTTGTTGGGGTGTCACTTTAATTAAGATGATAATACCAGTCCTTGCATCACCTAACTCTGGGCTTGGGACATTCATTAGGAAACAATTCAGAGTCTGTGTTTTTAGTTGAAATGATTGGATTAAGAATCCGATGATTAGCTCAAATTGACCCTTCTGACAGAGAAAACCTCCAAGGTTGATCAAAACAGGAAAAAGGCTTACAAATCGCTGTAGAAAATTTTGTTTTCTTCCTTGAAAATCTGCTGCAGCATCTCTAGTTCTAGAAATCTAAGCTGTATGGCAACTAAGAATTCTGTTTAGACTTCTGAAGGAAACCTAATTATAAATCTGACGAAGTCAATTGAACTTTTATGCTCTTTTTGAAGATCTGTTACTTATTTTGTTCCGAAGGCGAAGAGGGCTTGACATGTTTGACATGTTTGACCATAAGACTGTAGCTTTACAAAAATCAAACGGGATTGTAATCATTAAGTCCACTTGTGCCAAGACGAGCATAGTTCAGAAGTCAAGGTATCAACTCCTTCCATTGAGGTTGGAGGTTTGAAGCTTAACCCGCTAAAGTCCACATGTTTGCAACAGAGAGTCTGCTATGCGTGCTTTGATTGGATGTCTTGGTGGGGACGAGGGTGGGGAATATGGGGTCATATTTGAATTCTAACCAATGATAGGGTTTGACATTTGAACACTTGGTGCAGAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGGTGATCATAATGGCTTAAAAAGGCATCTTTTTATGTAAGAATTCTGATACTGCTGGAGTTCATGGTGAATTTGTATTCATGATGCTTGCTCTCCTTCATTACAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTAAGGGATAAATCTCTATTTTTTCCCCTTGTTTATCATGTGATGTAAAGCCTCCATGAGTCTGCTGATACTCAACTCCATTATCAGTATTCGCGCTAGCTACTAATTTTTTAAAATTTTAACCTGTCTGTCCAAATATTTAAATCTTTCTTCATGGGTTGGTGCTTTGAACATCAGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGAGTAAGATACTTGTGATATTTGTGATAATGCCTTGAATGTTACAAGATTTTAAGTTCAAACTGTTCATAACTTAGATATCTATTTTAGTGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGTAAAATTCGCATCCTTGACATTAATTAAGATGGAACTTGATATTGGTTTCGGACAGATTCCGTGATGATCCAAATTTGCTAAGTTTCTGGTTGTTAGATTGCTTGCTTAGTTGATTATCCTTGTGCTTGAGTACGCTTCGAATCACGTATTTAAAATGTATGATACACTGCTATAGCTAGCAAGGGAGATTTTTGTACCATTCTTCAGCTAGCTGACCTTACTAGCGTTTGAGCAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTTTCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCGTAAGAGCCCGAGAAGTTCCTCGATCGACCCTCTTGGTTTCTATGCTTCGCAATCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGGTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCTGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAACCATCACGGCGTATCCGAGTGCGACATGTGGGGATGAAATTCTACAAACAAAAACTCATCATGATTGATGAGAAAAGTATGTTCTAGTTTCAACATTGTAAAAAATTTCATCATTTTCCATCCATAGAGAATCTAGCATGAACTAAACATTCCTTAGCTTGTAAAACCAAGCCATTTAGTTCATAGACAACTCGTCGAAATGCACGTAGTTAGCCATTCTTTTTGCTGTTCCAAACATAGTCGATTCCTGTCCAGCTTTTAGCCGATTTGATTCGATTCAATTATCAGGATCTGTAATCAGTAATGTTAAGTTGAAAACACATCCTCTTTCACTAGCTAGTGAAACAGAGATCCTCTTCCATTAATGGTGGCAAAATGAATGAATCTTGTGTCACTTTTGCTTTAATCATTACAAGCAAATCATAATTAATCAAAACATTACAATGGAAACCTCGGATTTAGGAAAAGAAATGAAAGTGTCTCATCCATAAAAGTTTCATCTTTTTATTTTTATTTTTATTATTATTCTTATTATTAGGTGGAGCTGGAAAAGTCCCAACTGCCAAAGCCTTTTTTGACCAAGACCACAAGCCAAGCCAAAACAATTGTGCAGCTTTTTTATTTTTTACTTTTTACTTTCGGTTAAAATTACTCTGATTTGACTTAACAAAATAATAATAATTTATATTCAAGAAACAGTACAATAAAAAAAATATTTTTTCCATATTTTTTTTATCTTTTTTGAAGAATTATTCTTAAACTTATCCGACCAAATTTAAGATTCAAATTTAGAAATTTAAATCATTTACATCTTAATCAATAATTATGTTAATTACTTTTGGAGCTATGTTTGTTTATCTGGTTGTTCATAATAAATTCATTCTAGAATATTGATTCTAACTTCAAGAGATGGGTGTCAACTTGGCCTAAGGAACGAACTCGAAAGTGAGTAATGAATGGTGGAAGTTTTTAATCCGAAAGAGAATGAAATGGCGAAAGGTGAGTGATGGAGAAGAGATTGAAGGCTGAGCCAATGCAATAATGAAAAATGAACCTCCAAATTCCACCAGTTTTTGCTTTGCGTTCGTCCTGTAAACCAGGCAAAGGGCCGATGGGAGAGAGAAGCGCAGCGACGCAGTGACACCGAAGGGAATCCAATTGTTCTATCTTCTTCTTCCCTTGATCATCAAACACTCGAGAGCTACTCAGAAAGTGGCGCCCAATATTGGGGGATGCAGCCGTAGATCTAGGTATCTTCTTAACCTCTTTGTAAACGTATAATCTTACCTTACATTTACATTGGTTTCTTGTTCAAGTCGTTGCTCTGCTTTGCAATTTGCGGAGTTTTCAACTCTAATGCCCATCCATGTCTCTACCCTTCGGTTTCGGATATTGATTTCTTATCCCTTTCAAACTAACCCTGATTCTCTACCTTAGCATCTTTGTCAGTTCGTTGTTCTCCTTCTTTCGTTTGTTTCAGTGCCTGTTGATTAATTTGTTCGTAGCCTTTTAGCTTATTTGAAGTCGTGGATTTGAGCTTGCGAAGTTCGATTAATCTGTTGTTTGGAGGGGTTTCTTCTGAATTGTTATCGAATAAGAATCTGTTTCTGTGATCATTTCATATTCCAATCTATTTTCTTTGGTGAAGAAGAAAGGTGTTTGGTTCAGGAAGAGTGTTCCCTTTGAAGAACAATGGGTCCAAACATCTTTAGCAAAATGACTAACCTCCATTGGAATGTTGAACTCGTTATGATGCTCTTGTAGCATACTTCTTTTCTTCGTTTAGACTTGTTGACTTACTGTTTTCAGGTAA AAAAGACAAACCGTTGAAATCCGTGCCAACTTCCTCTGTTTCTCTCTCTCTCTCTCTCTCTTTCTTCTTCTCTACATCCTTTTCGCCGTCTAGTTCTTGGAAAGGGATTGGAGGCTCGATTTAGTAATTCAATGCCCCAACAGATTTCATCTTCTCTTTTGTATCTCTAGAAAATTTGGACACCAAAATTCATCGTTTCTTTCCGGTGTTGACTGATTTTCACTTTCAGCATTTCTTTTGGCGATTTGGAAGGTTATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCATGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGTGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTTACTCAACTCGGTGGTGCTAACAAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTTTCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCGTAAGAGCCCGAGAAGTTCCTCGATCGACCCTCTTGGTTTCTATGCTTCGCAATCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGGTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCTGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAACCATCACGGCGTATCCGAGTGCGACATGCAAAGGGCCGATGGGAGAGAGAAGCGCAGCGACGCAGTGACACCGAAGGGAATCCAATTGTTCTATCTTCTTCTTCCCTTGATCATCAAACACTCGAGAGCTACTCAGAAAGTGGCGCCCAATATTGGGGGATGCAGCCGTAGATCTAGGTAA ATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCATGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGTGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTTACTCAACTCGGTGGTGCTAACAAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTTTCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCGTAAGAGCCCGAGAAGTTCCTCGATCGACCCTCTTGGTTTCTATGCTTCGCAATCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGGTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCTGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAACCATCACGGCGTATCCGAGTGCGACATGCAAAGGGCCGATGGGAGAGAGAAGCGCAGCGACGCAGTGACACCGAAGGGAATCCAATTGTTCTATCTTCTTCTTCCCTTGATCATCAAACACTCGAGAGCTACTCAGAAAGTGGCGCCCAATATTGGGGGATGCAGCCGTAGATCTAGGTAA MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSISNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPPYQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLIWDEAREGIQDANIIQINHHGVSECDMQRADGREKRSDAVTPKGIQLFYLLLPLIIKHSRATQKVAPNIGGCSRRSR Homology
BLAST of CmoCh07G003670 vs. ExPASy Swiss-Prot
Match: Q94A57 (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.5e-46 Identity = 113/229 (49.34%), Postives = 150/229 (65.50%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy Swiss-Prot
Match: Q8LAJ7 (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.6e-45 Identity = 101/184 (54.89%), Postives = 132/184 (71.74%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy Swiss-Prot
Match: Q9SAK5 (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-36 Identity = 84/166 (50.60%), Postives = 115/166 (69.28%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy Swiss-Prot
Match: E5L8F7 (Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 7.6e-35 Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy Swiss-Prot
Match: Q9SQQ9 (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.9e-35 Identity = 99/237 (41.77%), Postives = 144/237 (60.76%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy TrEMBL
Match: A0A6J1EFI1 (protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111433839 PE=3 SV=1) HSP 1 Score: 620.9 bits (1600), Expect = 3.3e-174 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy TrEMBL
Match: A0A6J1KS45 (protein PHR1-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497132 PE=3 SV=1) HSP 1 Score: 585.9 bits (1509), Expect = 1.2e-163 Identity = 295/308 (95.78%), Postives = 299/308 (97.08%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy TrEMBL
Match: A0A1S4DTK9 (LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX=3656 GN=LOC103485209 PE=3 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 1.1e-156 Identity = 282/311 (90.68%), Postives = 293/311 (94.21%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy TrEMBL
Match: A0A0A0KL09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510300 PE=3 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 5.8e-155 Identity = 280/311 (90.03%), Postives = 290/311 (93.25%), Query Frame = 0
BLAST of CmoCh07G003670 vs. ExPASy TrEMBL
Match: A0A5A7SIG3 (Protein PHR1-LIKE 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00480 PE=3 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 2.2e-154 Identity = 282/320 (88.12%), Postives = 293/320 (91.56%), Query Frame = 0
BLAST of CmoCh07G003670 vs. NCBI nr
Match: XP_022926852.1 (protein PHR1-LIKE 2-like [Cucurbita moschata]) HSP 1 Score: 620.9 bits (1600), Expect = 6.8e-174 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of CmoCh07G003670 vs. NCBI nr
Match: XP_023518425.1 (protein PHR1-LIKE 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 613.6 bits (1581), Expect = 1.1e-171 Identity = 308/311 (99.04%), Postives = 308/311 (99.04%), Query Frame = 0
BLAST of CmoCh07G003670 vs. NCBI nr
Match: KAG6594720.1 (Protein PHR1-LIKE 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 605.1 bits (1559), Expect = 3.9e-169 Identity = 305/311 (98.07%), Postives = 305/311 (98.07%), Query Frame = 0
BLAST of CmoCh07G003670 vs. NCBI nr
Match: XP_023003570.1 (protein PHR1-LIKE 2-like [Cucurbita maxima]) HSP 1 Score: 585.9 bits (1509), Expect = 2.4e-163 Identity = 295/308 (95.78%), Postives = 299/308 (97.08%), Query Frame = 0
BLAST of CmoCh07G003670 vs. NCBI nr
Match: XP_038883093.1 (protein PHR1-LIKE 2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 567.4 bits (1461), Expect = 8.9e-158 Identity = 287/311 (92.28%), Postives = 292/311 (93.89%), Query Frame = 0
BLAST of CmoCh07G003670 vs. TAIR 10
Match: AT3G24120.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 188.3 bits (477), Expect = 1.0e-47 Identity = 113/229 (49.34%), Postives = 150/229 (65.50%), Query Frame = 0
BLAST of CmoCh07G003670 vs. TAIR 10
Match: AT4G13640.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 183.7 bits (465), Expect = 2.6e-46 Identity = 101/184 (54.89%), Postives = 132/184 (71.74%), Query Frame = 0
BLAST of CmoCh07G003670 vs. TAIR 10
Match: AT3G24120.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 183.0 bits (463), Expect = 4.4e-46 Identity = 113/232 (48.71%), Postives = 150/232 (64.66%), Query Frame = 0
BLAST of CmoCh07G003670 vs. TAIR 10
Match: AT4G13640.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 178.3 bits (451), Expect = 1.1e-44 Identity = 101/187 (54.01%), Postives = 132/187 (70.59%), Query Frame = 0
BLAST of CmoCh07G003670 vs. TAIR 10
Match: AT1G79430.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 155.2 bits (391), Expect = 9.8e-38 Identity = 84/166 (50.60%), Postives = 115/166 (69.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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