CmoCh07G003590 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G003590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr07: 1651476 .. 1651736 (-)
RNA-Seq ExpressionCmoCh07G003590
SyntenyCmoCh07G003590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCCTTCATCATGATTCCCCCCACTAACTCCGCTGATTTTTCTCCCATCGATTGTTGGTTGGTTCTTCTCGATCTGCATGTCGGCCACGTGTCGCCGGCTGTATCACTCTTCTTTTTGTTGGTGGTTTCGGTGGCTAATCGCAGACAACTCTCTTCTTTCTTTCAACTTGTGTCGCCTAATTTCTCCATGCGCGAGCGGGACTGCCGCTGCCGTGCATTTTCCGGCGGCGGCGTTCACTTCCGATTCGAGCAGTAG

mRNA sequence

ATGGCAGCCTTCATCATGATTCCCCCCACTAACTCCGCTGATTTTTCTCCCATCGATTGTTGGTTGGTTCTTCTCGATCTGCATGTCGGCCACGTGTCGCCGGCTGTATCACTCTTCTTTTTGTTGGTGGTTTCGGTGGCTAATCGCAGACAACTCTCTTCTTTCTTTCAACTTGTGTCGCCTAATTTCTCCATGCGCGAGCGGGACTGCCGCTGCCGTGCATTTTCCGGCGGCGGCGTTCACTTCCGATTCGAGCAGTAG

Coding sequence (CDS)

ATGGCAGCCTTCATCATGATTCCCCCCACTAACTCCGCTGATTTTTCTCCCATCGATTGTTGGTTGGTTCTTCTCGATCTGCATGTCGGCCACGTGTCGCCGGCTGTATCACTCTTCTTTTTGTTGGTGGTTTCGGTGGCTAATCGCAGACAACTCTCTTCTTTCTTTCAACTTGTGTCGCCTAATTTCTCCATGCGCGAGCGGGACTGCCGCTGCCGTGCATTTTCCGGCGGCGGCGTTCACTTCCGATTCGAGCAGTAG

Protein sequence

MAAFIMIPPTNSADFSPIDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSMRERDCRCRAFSGGGVHFRFEQ
Homology
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BLAST of CmoCh07G003590 vs. NCBI nr
Match: KAG6594713.1 (hypothetical protein SDJN03_11266, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.8 bits (338), Expect = 3.5e-28
Identity = 69/77 (89.61%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 6  MIPPTNSADFSPIDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSM 65
          MIPPTNSADFS IDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSM
Sbjct: 1  MIPPTNSADFSSIDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSM 60

Query: 66 RERDCRCRAFSGGGVHF 83
          RERDCR  A     VHF
Sbjct: 61 RERDCRSTA---AAVHF 74

The following BLAST results are available for this feature:
BLAST of CmoCh07G003590 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G003590 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G003590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594713.13.5e-2889.61hypothetical protein SDJN03_11266, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmoCh07G003590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G003590.1CmoCh07G003590.1mRNA