Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTACGCACCAATCCAACCACCACCCATCTCTTGTCGTTCAATCCTCCATTGCTCTACTTCAAGAGAGATTCAGACAGCTTCAGAAAGTGAAGGAGATGAGAGAGGAGAGAGAGCTTGTACGATTGCTATCACTTTCCAACCCCAAAAAACATGGCTTGTTCAATACTTGTGTGCTGTTTGAACCCTCCGTTGCGACGATGATGATGCTACCTACCACGACGACGACAAAGATGTTAACTTTGCCTCAAACGTCTCTATCGCTTTGGCCGACGTCGCCATCACCAGGCAAGAAGCTCGCCGTTGGTGTTGATGTTGACGTGCCTGCATTGATGAACTTATGGCCGGTGGATAATGTAACTACTAGTACTACTTCGTCTTGTGATAGCGCCATCTCATTGATTAGTAAACTAGAACATGATCATGAGTCTGACTCTAATATCGATGTTGATACTTCTCTTCGCTTGTAA
mRNA sequence
ATGGGTACGCACCAATCCAACCACCACCCATCTCTTGTCGTTCAATCCTCCATTGCTCTACTTCAAGAGAGATTCAGACAGCTTCAGAAAGTGAAGGAGATGAGAGAGGAGAGAGAGCTTGTACGATTGCTATCACTTTCCAACCCCAAAAAACATGGCTTGTTCAATACTTGTGTGCTGTTTGAACCCTCCGTTGCGACGATGATGATGCTACCTACCACGACGACGACAAAGATGTTAACTTTGCCTCAAACGTCTCTATCGCTTTGGCCGACGTCGCCATCACCAGGCAAGAAGCTCGCCGTTGGTGTTGATGTTGACGTGCCTGCATTGATGAACTTATGGCCGGTGGATAATGTAACTACTAGTACTACTTCGTCTTGTGATAGCGCCATCTCATTGATTAGTAAACTAGAACATGATCATGAGTCTGACTCTAATATCGATGTTGATACTTCTCTTCGCTTGTAA
Coding sequence (CDS)
ATGGGTACGCACCAATCCAACCACCACCCATCTCTTGTCGTTCAATCCTCCATTGCTCTACTTCAAGAGAGATTCAGACAGCTTCAGAAAGTGAAGGAGATGAGAGAGGAGAGAGAGCTTGTACGATTGCTATCACTTTCCAACCCCAAAAAACATGGCTTGTTCAATACTTGTGTGCTGTTTGAACCCTCCGTTGCGACGATGATGATGCTACCTACCACGACGACGACAAAGATGTTAACTTTGCCTCAAACGTCTCTATCGCTTTGGCCGACGTCGCCATCACCAGGCAAGAAGCTCGCCGTTGGTGTTGATGTTGACGTGCCTGCATTGATGAACTTATGGCCGGTGGATAATGTAACTACTAGTACTACTTCGTCTTGTGATAGCGCCATCTCATTGATTAGTAAACTAGAACATGATCATGAGTCTGACTCTAATATCGATGTTGATACTTCTCTTCGCTTGTAA
Protein sequence
MGTHQSNHHPSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSNPKKHGLFNTCVLFEPSVATMMMLPTTTTTKMLTLPQTSLSLWPTSPSPGKKLAVGVDVDVPALMNLWPVDNVTTSTTSSCDSAISLISKLEHDHESDSNIDVDTSLRL
Homology
BLAST of CmoCh07G003460 vs. ExPASy TrEMBL
Match:
A0A5D3CME5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005880 PE=4 SV=1)
HSP 1 Score: 120.6 bits (301), Expect = 6.0e-24
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 5 QSNHHPSLVV-QSSIALLQERFRQLQKVKEMREERELVRLLSLSN-PKKHGL-------- 64
+ N S+VV SSIALLQERFRQLQKVKEMREERE+V+LLSLS PK H
Sbjct: 8 KDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNNT 67
Query: 65 ---FNTCVLFEPSVAT-------MMML--------PTTTTTKMLTLPQTSLSLWPTSPSP 124
NTCV+FEPS++ MM + ++TTT + LPQTSLSL T+ S
Sbjct: 68 NTNTNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTSSS 127
Query: 125 GKKLAVGVDVDVPALMNLWPVDNVTTSTTSSCDSAISLISKL-EHDHES------DSNID 157
+ ++P LM+LWPV + T++T+SSCDSAIS ISKL +HDH DS+I+
Sbjct: 128 HDHDHQQSN-NIPTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFDSDIE 187
BLAST of CmoCh07G003460 vs. ExPASy TrEMBL
Match:
A0A0A0KJS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511110 PE=4 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 7.9e-24
Identity = 92/180 (51.11%), Postives = 111/180 (61.67%), Query Frame = 0
Query: 12 LVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSN-PKKH------------GLFNTC 71
L+ SSIALLQERFRQLQKVKEMREE+E+V+LLSLS PK H NTC
Sbjct: 17 LLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTC 76
Query: 72 VLFEPSVAT-------MMML--------PTTTTTKMLTLPQTSLSLWPTSPSPGKKLAVG 131
V+FEPS++ MM + +TTTT + LPQTSLSL TS S
Sbjct: 77 VVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQ 136
Query: 132 VDVDVPALMNLWPVDNVTTSTTSSCDSAISLISKL-EHDHES------DSNIDVDTSLRL 157
+ ++P LM+LWPV +TSTTSSCDSAIS I+KL +HDH DS+I+VDTSL L
Sbjct: 137 SN-NIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL 195
BLAST of CmoCh07G003460 vs. ExPASy TrEMBL
Match:
A0A2P5EXK0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_139070 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 4.9e-10
Identity = 66/158 (41.77%), Postives = 88/158 (55.70%), Query Frame = 0
Query: 5 QSNHHPSL--VVQSSIALLQERFRQLQKVKEMREERELVRLL-SLSNPKKHGLFNTCVLF 64
+S+ +P+ +V SSIALLQERFR+LQ+VKEMREEREL+R+L N + FNT +
Sbjct: 4 ESHEYPTTTHMVHSSIALLQERFRELQRVKEMREERELLRMLVEPHNSTIYKRFNTTQYY 63
Query: 65 EPSVATMMMLPTTTTTKMLTLPQTSLSLWPTSPSPGKK--LAVGVDVDVPALMNLWP-VD 124
EP+ A + + T PQ SLSLWPT + ++ V+ P LM WP VD
Sbjct: 64 EPA-AKLAFHHDMMFQQRSTAPQVSLSLWPTFQNSFEEQYYYCSSFVESPLLMKSWPKVD 123
Query: 125 NVTTSTTSSCDSAISLISKLEHDHESDSNIDVDTSLRL 157
T S ++ ++ DHES DVDTSL L
Sbjct: 124 ------TPSFEACLNKSQDSVDDHES----DVDTSLHL 150
BLAST of CmoCh07G003460 vs. ExPASy TrEMBL
Match:
A0A6P3ZU56 (uncharacterized protein LOC107415217 OS=Ziziphus jujuba OX=326968 GN=LOC107415217 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 0
Query: 9 HPSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLS-NPKKHG--LFNTCVLFEPSV 68
H + + SSIALLQERFRQLQ++KEMRE +EL+R+L + N +K N + FEP
Sbjct: 6 HNPIAIHSSIALLQERFRQLQRMKEMREGKELIRMLVVEPNKQKQSDINLNPTLYFEPPK 65
Query: 69 ATMMMLPTTTTTKMLTL-PQTSLSLWPTSPS-PGKKLAVGVDVDV---PALMNLWPVDNV 128
+ P T ++ + Q SLSLW S + G+++ P LMNLWPV N
Sbjct: 66 S--FPNPDFLTPQIRPISQQDSLSLWQNLRSNMNIEDFRGIEISCCVPPTLMNLWPV-ND 125
Query: 129 TTSTTSSCDSAISLISKLEHDHESDSNIDVDTSLRL 157
T S++++ S+ S I K E +SDS+ DVDTSL L
Sbjct: 126 TPSSSNASSSSSSNIYKFE---DSDSDSDVDTSLHL 155
BLAST of CmoCh07G003460 vs. ExPASy TrEMBL
Match:
A0A059CF52 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D01438 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 69/167 (41.32%), Postives = 87/167 (52.10%), Query Frame = 0
Query: 1 MGTHQSNHHPSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSN----------PK 60
MG +SN +V+QSSIALLQERFRQLQKVKEMREER+ ++LL+ N P
Sbjct: 1 MGIGESN--DPIVIQSSIALLQERFRQLQKVKEMREERQTLKLLTEPNSKVLSPTASPPP 60
Query: 61 KHGLFNTCVLFEPSVATMMMLPTTTTTKMLTLPQTSLSLWPTSPSPGKKLAVGVDVDVPA 120
H P + + P ++ PQ SLSLWP+S S L G + PA
Sbjct: 61 SHCEPLGFFFHHPEMMVNNIYPACSSP-----PQLSLSLWPSSRSNYSHLRFG---ETPA 120
Query: 121 LM-NLWPVDNVTTSTTSSCDSAISLISKLEHDHESDSNIDVDTSLRL 157
L+ +LWPV+ TTS +S E+DH DVDTSL L
Sbjct: 121 LVTSLWPVE--TTSL------RVSSTKYKEYDHFD----DVDTSLHL 145
BLAST of CmoCh07G003460 vs. NCBI nr
Match:
KAG6594702.1 (hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 151/161 (93.79%), Postives = 154/161 (95.65%), Query Frame = 0
Query: 1 MGTHQSNHHPSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSNPKKHGLFNTCVL 60
MGTHQSNHHPSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSNPKKHGLFNTCVL
Sbjct: 1 MGTHQSNHHPSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSNPKKHGLFNTCVL 60
Query: 61 FEPSVATMMMLPTTTT-----TKMLTLPQTSLSLWPTSPSPGKKLAVGVDVDVPALMNLW 120
FEPSVATMMMLPTTTT TKMLTLPQTSLSLWPTSPSPGKKL VGVDVDVPALMNLW
Sbjct: 61 FEPSVATMMMLPTTTTTTMTATKMLTLPQTSLSLWPTSPSPGKKLTVGVDVDVPALMNLW 120
Query: 121 PVDNVTTSTTSSCDSAISLISKLEHDHESDSNIDVDTSLRL 157
PVD+VTTST+SSCDSAISLISKLEHDHESDS+IDVDTSL L
Sbjct: 121 PVDSVTTSTSSSCDSAISLISKLEHDHESDSDIDVDTSLHL 161
BLAST of CmoCh07G003460 vs. NCBI nr
Match:
TYK12991.1 (hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa])
HSP 1 Score: 120.6 bits (301), Expect = 1.2e-23
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 5 QSNHHPSLVV-QSSIALLQERFRQLQKVKEMREERELVRLLSLSN-PKKHGL-------- 64
+ N S+VV SSIALLQERFRQLQKVKEMREERE+V+LLSLS PK H
Sbjct: 8 KDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNNT 67
Query: 65 ---FNTCVLFEPSVAT-------MMML--------PTTTTTKMLTLPQTSLSLWPTSPSP 124
NTCV+FEPS++ MM + ++TTT + LPQTSLSL T+ S
Sbjct: 68 NTNTNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTSSS 127
Query: 125 GKKLAVGVDVDVPALMNLWPVDNVTTSTTSSCDSAISLISKL-EHDHES------DSNID 157
+ ++P LM+LWPV + T++T+SSCDSAIS ISKL +HDH DS+I+
Sbjct: 128 HDHDHQQSN-NIPTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFDSDIE 187
BLAST of CmoCh07G003460 vs. NCBI nr
Match:
KGN49044.1 (hypothetical protein Csa_002770 [Cucumis sativus])
HSP 1 Score: 120.2 bits (300), Expect = 1.6e-23
Identity = 92/180 (51.11%), Postives = 111/180 (61.67%), Query Frame = 0
Query: 12 LVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSN-PKKH------------GLFNTC 71
L+ SSIALLQERFRQLQKVKEMREE+E+V+LLSLS PK H NTC
Sbjct: 17 LLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTC 76
Query: 72 VLFEPSVAT-------MMML--------PTTTTTKMLTLPQTSLSLWPTSPSPGKKLAVG 131
V+FEPS++ MM + +TTTT + LPQTSLSL TS S
Sbjct: 77 VVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQ 136
Query: 132 VDVDVPALMNLWPVDNVTTSTTSSCDSAISLISKL-EHDHES------DSNIDVDTSLRL 157
+ ++P LM+LWPV +TSTTSSCDSAIS I+KL +HDH DS+I+VDTSL L
Sbjct: 137 SN-NIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL 195
BLAST of CmoCh07G003460 vs. NCBI nr
Match:
PON90257.1 (hypothetical protein TorRG33x02_139070 [Trema orientale])
HSP 1 Score: 74.3 bits (181), Expect = 1.0e-09
Identity = 66/158 (41.77%), Postives = 88/158 (55.70%), Query Frame = 0
Query: 5 QSNHHPSL--VVQSSIALLQERFRQLQKVKEMREERELVRLL-SLSNPKKHGLFNTCVLF 64
+S+ +P+ +V SSIALLQERFR+LQ+VKEMREEREL+R+L N + FNT +
Sbjct: 4 ESHEYPTTTHMVHSSIALLQERFRELQRVKEMREERELLRMLVEPHNSTIYKRFNTTQYY 63
Query: 65 EPSVATMMMLPTTTTTKMLTLPQTSLSLWPTSPSPGKK--LAVGVDVDVPALMNLWP-VD 124
EP+ A + + T PQ SLSLWPT + ++ V+ P LM WP VD
Sbjct: 64 EPA-AKLAFHHDMMFQQRSTAPQVSLSLWPTFQNSFEEQYYYCSSFVESPLLMKSWPKVD 123
Query: 125 NVTTSTTSSCDSAISLISKLEHDHESDSNIDVDTSLRL 157
T S ++ ++ DHES DVDTSL L
Sbjct: 124 ------TPSFEACLNKSQDSVDDHES----DVDTSLHL 150
BLAST of CmoCh07G003460 vs. NCBI nr
Match:
KAF3451851.1 (hypothetical protein FNV43_RR07947 [Rhamnella rubrinervis])
HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09
Identity = 66/161 (40.99%), Postives = 91/161 (56.52%), Query Frame = 0
Query: 1 MGTHQSNHHPSLVVQSSIALLQERFRQLQKVKEMREERELV-RLLSLSNPKKHGLFNTCV 60
MGT +S+ PS VV SSIALLQERFRQLQ++KEMREE+EL+ R+L+++ N V
Sbjct: 1 MGT-ESHECPS-VVHSSIALLQERFRQLQRMKEMREEKELINRMLAVAESNNKHYLNIHV 60
Query: 61 ----LFEPSVATMMMLPTTTTTKMLTLPQTSLSLWPTSPSPGKKLAVGVDVDVPALMNLW 120
FEP+ + ++ Q S+S W ++ + + LMNLW
Sbjct: 61 KPTMYFEPA---CLFPKPQRAIQVQPQNQDSVSQWQSNVEYRSVESSSISSCTRPLMNLW 120
Query: 121 PVDNVTTSTTSSCDSAISLISKLEHDHESDSNIDVDTSLRL 157
P+D T S SS D+++S SKL ++ DS DVDTSL L
Sbjct: 121 PIDYDTPS--SSSDASLS-FSKLSEEYLCDSESDVDTSLHL 153
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CME5 | 6.0e-24 | 49.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KJS5 | 7.9e-24 | 51.11 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511110 PE=4 SV=1 | [more] |
A0A2P5EXK0 | 4.9e-10 | 41.77 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_139070 PE=4 SV... | [more] |
A0A6P3ZU56 | 1.1e-09 | 42.31 | uncharacterized protein LOC107415217 OS=Ziziphus jujuba OX=326968 GN=LOC10741521... | [more] |
A0A059CF52 | 1.1e-09 | 41.32 | Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D01438 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
KAG6594702.1 | 1.4e-72 | 93.79 | hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
TYK12991.1 | 1.2e-23 | 49.73 | hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa] | [more] |
KGN49044.1 | 1.6e-23 | 51.11 | hypothetical protein Csa_002770 [Cucumis sativus] | [more] |
PON90257.1 | 1.0e-09 | 41.77 | hypothetical protein TorRG33x02_139070 [Trema orientale] | [more] |
KAF3451851.1 | 1.7e-09 | 40.99 | hypothetical protein FNV43_RR07947 [Rhamnella rubrinervis] | [more] |
Match Name | E-value | Identity | Description | |