CmoCh07G002340 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G002340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	VQ motif-containing protein 4-like
Location	Cmo_Chr07: 1168925 .. 1169602 (-)
RNA-Seq Expression	CmoCh07G002340
Synteny	CmoCh07G002340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATCTCTCCAAGGCCTCATCAAAAGTCCACCACCACCACCACCGCCGCCGCCGCCGCCAATGGGCTTCAACCACCACCGCCGCCGTCTCCAACGACCAGAATCACCAACAGATCCGAATCTGCAAACCCGTACCCGGCCACTTTCGTCCAAGCCGATACCTCCTCTTTCAAAGAAGTAGTTCAAATGCTGACCGGATCGCCCGAAACCGCGAAGCAAATATCCACACCCAAAACCCATATCCCTCCGATTAAATCCATCCCCAAACGCCAACACTCCACGTTCAAGCTGTACGAGCGTAGAAATCTGCTCAATAACTTCCAAATCAGTCCCGTTTTTGCCTCTCTTACTGCCGGATTCTCCCCCAGAAATTACCCCGAAATTCTCTCCCCCACCATGCTGGATTTCCCATCCCTCCTCCTCAGCCCCGTCACGCCCCTCATTCCCGACCCCTTCCGCCGATCGCAGCCGTTGAATTGTGAACCGTCCAACAACATCACTATTAATCCGCCGGTGGATGAACAAGCCGAAGCTAAAGCCATTAGAGAAAAGGGATTTTACTTGCACCCATCGCCGGCCACCACCCCCAGGGAATCGGAGCCGCAGCTCTTGCCTCTGTTTCCAGTCACTTCCCCTGCAGATCAACCAGCTCCACCTCGCTCTTCTGCATCTTGA

mRNA sequence

ATGAAAATCTCTCCAAGGCCTCATCAAAAGTCCACCACCACCACCACCGCCGCCGCCGCCGCCAATGGGCTTCAACCACCACCGCCGCCGTCTCCAACGACCAGAATCACCAACAGATCCGAATCTGCAAACCCGTACCCGGCCACTTTCGTCCAAGCCGATACCTCCTCTTTCAAAGAAGTAGTTCAAATGCTGACCGGATCGCCCGAAACCGCGAAGCAAATATCCACACCCAAAACCCATATCCCTCCGATTAAATCCATCCCCAAACGCCAACACTCCACGTTCAAGCTGTACGAGCGTAGAAATCTGCTCAATAACTTCCAAATCAGTCCCGTTTTTGCCTCTCTTACTGCCGGATTCTCCCCCAGAAATTACCCCGAAATTCTCTCCCCCACCATGCTGGATTTCCCATCCCTCCTCCTCAGCCCCGTCACGCCCCTCATTCCCGACCCCTTCCGCCGATCGCAGCCGTTGAATTGTGAACCGTCCAACAACATCACTATTAATCCGCCGGTGGATGAACAAGCCGAAGCTAAAGCCATTAGAGAAAAGGGATTTTACTTGCACCCATCGCCGGCCACCACCCCCAGGGAATCGGAGCCGCAGCTCTTGCCTCTGTTTCCAGTCACTTCCCCTGCAGATCAACCAGCTCCACCTCGCTCTTCTGCATCTTGA

Coding sequence (CDS)

ATGAAAATCTCTCCAAGGCCTCATCAAAAGTCCACCACCACCACCACCGCCGCCGCCGCCGCCAATGGGCTTCAACCACCACCGCCGCCGTCTCCAACGACCAGAATCACCAACAGATCCGAATCTGCAAACCCGTACCCGGCCACTTTCGTCCAAGCCGATACCTCCTCTTTCAAAGAAGTAGTTCAAATGCTGACCGGATCGCCCGAAACCGCGAAGCAAATATCCACACCCAAAACCCATATCCCTCCGATTAAATCCATCCCCAAACGCCAACACTCCACGTTCAAGCTGTACGAGCGTAGAAATCTGCTCAATAACTTCCAAATCAGTCCCGTTTTTGCCTCTCTTACTGCCGGATTCTCCCCCAGAAATTACCCCGAAATTCTCTCCCCCACCATGCTGGATTTCCCATCCCTCCTCCTCAGCCCCGTCACGCCCCTCATTCCCGACCCCTTCCGCCGATCGCAGCCGTTGAATTGTGAACCGTCCAACAACATCACTATTAATCCGCCGGTGGATGAACAAGCCGAAGCTAAAGCCATTAGAGAAAAGGGATTTTACTTGCACCCATCGCCGGCCACCACCCCCAGGGAATCGGAGCCGCAGCTCTTGCCTCTGTTTCCAGTCACTTCCCCTGCAGATCAACCAGCTCCACCTCGCTCTTCTGCATCTTGA

Protein sequence

MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS

Homology

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BLAST of CmoCh07G002340 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49
Identity = 122/234 (52.14%), Postives = 154/234 (65.81%), Query Frame = 0


Query: 4   SPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQ 63
           SPR H  + +   ++++ +     PP +PT  +T RSES NPYP TFVQADTSSFK+VVQ
Sbjct: 16  SPRCHNSNNSCGMSSSSESN---KPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQ 75

Query: 64  MLTGSPETAKQISTPK---TH-------------IPPIKSIPKRQHST-----FKLYERR 123
           MLTGS E  K  S+ K   TH             IPPIK++P ++ S+     F+LYERR
Sbjct: 76  MLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERR 135

Query: 124 NLLNNFQI---SPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPL 183
           N + N +I   +PVF  + + FSPR  PEILSP++LDFPSL+LSPVTPLIPDPF RS   
Sbjct: 136 NSMKNLKINPLNPVFNPVNSAFSPRK-PEILSPSILDFPSLVLSPVTPLIPDPFDRSGSS 195

Query: 184 NCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSP 214
           N  P+         +  AE KA++E+GFYLHPSPATTP + EP+LLPLFPVTSP
Sbjct: 196 NQSPN---------ELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

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BLAST of CmoCh07G002340 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-30
Identity = 88/198 (44.44%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 28  PPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQMLTGSPETAKQISTPK----THIP 87
           P PS  T    R    + Y  TF++ D SSFK+VVQ+LTG P+       P+      IP
Sbjct: 16  PSPSSCTTTPTRYVKDDMYETTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIP 75

Query: 88  PIKSIP-KRQHSTFKLYERRNLLNNF-QISPVFASLTAGFSPRNYPEILSPTMLDFPSLL 147
           PIK++  K+Q S+F+L ERRN + ++  I+P  +           PEIL+PT+L+FP+L 
Sbjct: 76  PIKAVTNKKQSSSFRLSERRNSMKHYLNINPTHS---------GPPEILTPTILNFPALD 135

Query: 148 LSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE 207
           LSP TPL+ DPF R    +  PS++    P  D+  E ++I+EKGFYL PSP+TTPR++E
Sbjct: 136 LSPDTPLMSDPFYRPGSFSQSPSDS---KPSFDDDQE-RSIKEKGFYLRPSPSTTPRDTE 195

Query: 208 PQLLPLFPVTSPADQPAP 220
           P+LL LFP+T P   PAP
Sbjct: 196 PRLLSLFPMT-PIHSPAP 199

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BLAST of CmoCh07G002340 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-29
Identity = 106/245 (43.27%), Postives = 136/245 (55.51%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           M+IS  P   S++++ +++  NG       S    I  RS+    YP TFVQAD+SSFK+
Sbjct: 1   MEISTNP-PSSSSSSVSSSIING-------SLHHHIITRSDH---YPTTFVQADSSSFKQ 60

Query: 61  VVQMLTG-----SPETAKQISTPKTH----IPPIKSIPKRQHSTFKLYERRN---LLNNF 120
           VVQMLTG     SP++ +  +TP       IPPIK+   ++HS  KLYERR+     NN 
Sbjct: 61  VVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKHSGNKLYERRSHGGFNNNL 120

Query: 121 QISPVFASLTAG--------FSPRNYPEILSPTMLDFPSLLL-SPVTPLIP-------DP 180
           + S +  +L  G        FSPRN  EILSP+ LDFP L L SPVTPL         DP
Sbjct: 121 KNSLMINTLMIGGGGAGSPRFSPRN-QEILSPSCLDFPKLALNSPVTPLKQGTNGNEGDP 180

Query: 181 FRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTS 218
           F +  PL+                 E + I +KG+YLH SP +TPR+SEPQLLPLFPVTS
Sbjct: 181 FDKMSPLS----------------EEERGIADKGYYLHRSPISTPRDSEPQLLPLFPVTS 217

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BLAST of CmoCh07G002340 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.1e-27
Identity = 104/253 (41.11%), Postives = 129/253 (50.99%), Query Frame = 0


Query: 13  TTTTAAAAANGLQPPPPPSPTTRI----------TNRSESANPYPATFVQADTSSFKEVV 72
           +T++ ++    +Q PPP   + R                 +NPYP TFVQADTS+FK+VV
Sbjct: 4   STSSMSSKPEQMQNPPPMISSPRFQPQIISPHHHDQHQHLSNPYPTTFVQADTSTFKQVV 63

Query: 73  QMLTGS---PETAKQISTPKT----------HIPPIKSIPKRQHSTFKLYERRNLLNN-F 132
           QMLTGS     T K    P             IPPIK     + ++FKLYERR   NN F
Sbjct: 64  QMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIK-----KTNSFKLYERRQNNNNMF 123

Query: 133 QISPVFAS-----------LTAG---------FSPRNYPE----ILSPTMLDFPSL-LLS 192
             + +  +            T G         FSPRN       +LSP+MLDFP L L S
Sbjct: 124 AKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSMLDFPKLGLNS 183

Query: 193 PVTPL--IPDPFRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE 215
           PVTPL    DPF +S PL+   S+            E KAI +KGFYLHPSP +TPR+S+
Sbjct: 184 PVTPLRSNDDPFNKSSPLSLGNSSE-----------EDKAIADKGFYLHPSPVSTPRDSQ 240

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BLAST of CmoCh07G002340 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.3e-12
Identity = 62/174 (35.63%), Postives = 90/174 (51.72%), Query Frame = 0


Query: 49  TFVQADTSSFKEVVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNF 108
           TFVQ DT++F+E+VQ LTG  E     +TP+  +  IK+  +++  T KL+ERR  +   
Sbjct: 18  TFVQTDTNTFREIVQRLTGPTENNAAAATPEATV--IKTAIQKR-PTSKLHERRQCMRPK 77

Query: 109 Q--ISPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPV-TPLIPDPFRRSQPLNCEPSN 168
              + P  +    G +P         +     +LL SPV TP     F     +  EP +
Sbjct: 78  LEIVKPPLSFKPTGTTP--------SSKSGNTNLLTSPVGTP--SSLFSNLSLIEGEPDS 137

Query: 169 NITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAP 220
             T     + + E KAI+E+ FYLHPSP + P  +EP+LL LFP+TSP     P
Sbjct: 138 CTT-----NIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSPNSSGKP 173

[Close]

BLAST of CmoCh07G002340 vs. ExPASy TrEMBL
Match: A0A6J1EM47 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433810 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.5e-120
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE
Sbjct: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60

Query: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120
           VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG
Sbjct: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120

Query: 121 FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180
           FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK
Sbjct: 121 FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180

Query: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 226
           AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS
Sbjct: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 225

[Close]

BLAST of CmoCh07G002340 vs. ExPASy TrEMBL
Match: A0A6J1KU05 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497201 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.3e-114
Identity = 216/225 (96.00%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           MKISPRPHQKST TTT   AANGLQPPP PSPTTRITNRSESANPYPATFVQADTSSFKE
Sbjct: 1   MKISPRPHQKSTNTTT--TAANGLQPPPSPSPTTRITNRSESANPYPATFVQADTSSFKE 60

Query: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120
           VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG
Sbjct: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120

Query: 121 FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180
           FSPRNYPEILSPTMLDFPSL+LSPVTPLIPDPFRR+QPLNCEPSNNITINPPVDEQAEAK
Sbjct: 121 FSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRTQPLNCEPSNNITINPPVDEQAEAK 180

Query: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 226
           AIREKGFYLHPSPATTPRESEPQLLPLFPVTSP DQP PPRSSAS
Sbjct: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQPGPPRSSAS 223

[Close]

BLAST of CmoCh07G002340 vs. ExPASy TrEMBL
Match: A0A6J1EIU9 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433020 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.1e-78
Identity = 156/206 (75.73%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 24  LQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQMLTGSPETAKQISTP----K 83
           +QPPPPP P  ++ NRSES NPYP TFVQA+TSSFK+VVQMLTGSPETAKQ+STP    K
Sbjct: 41  VQPPPPPPP--KMMNRSESTNPYPTTFVQANTSSFKQVVQMLTGSPETAKQVSTPDPPSK 100

Query: 84  THIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPS 143
           THIP IKSIP+R HS FKLYERRN L N QI+PVFAS+TAGFSPRN+PEI SP+MLDFPS
Sbjct: 101 THIPSIKSIPQRPHSNFKLYERRNALRNLQINPVFASVTAGFSPRNHPEIHSPSMLDFPS 160

Query: 144 LLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRE 203
           L++SPVTPLIPDPF RSQPLN EPSNN++ NP +D +AEA AIREKGFYLHPSP TTPRE
Sbjct: 161 LVISPVTPLIPDPFGRSQPLNSEPSNNVSSNPGLDVEAEANAIREKGFYLHPSPTTTPRE 220

Query: 204 SEPQLLPLFPVTSPADQPAPPRSSAS 226
           SEPQLLPLFP+TSP  +P P  +S+S
Sbjct: 221 SEPQLLPLFPITSP-PRPGPGPASSS 243

[Close]

BLAST of CmoCh07G002340 vs. ExPASy TrEMBL
Match: A0A6J1IR60 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478627 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.7e-75
Identity = 152/195 (77.95%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 38  NRSESANPYPATFVQADTSSFKEVVQMLTGSPETAKQISTP----KTHIPPIKSIPKRQH 97
           NRSES NPYP TFVQADTSSFK+VVQMLTGSPETAKQ+STP    KTHIP IKSIP+R H
Sbjct: 3   NRSESTNPYPITFVQADTSSFKQVVQMLTGSPETAKQVSTPDSPSKTHIPSIKSIPQRSH 62

Query: 98  STFKLYERRNLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPF 157
           S FKLYERRN L N QI PVFAS TAGFSPR +PEI SP+MLDFPSL++SPVTPLIPDPF
Sbjct: 63  SNFKLYERRNALRNLQIDPVFASFTAGFSPRTHPEIHSPSMLDFPSLVISPVTPLIPDPF 122

Query: 158 RRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTS- 217
            RSQPLN EPSNN++ NP +D +AEAKAIREKGFYLHPSPATTPRESEPQLLPLFP+TS 
Sbjct: 123 GRSQPLNSEPSNNVSSNPGLDVEAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPITSP 182

Query: 218 --PADQPAPPRSSAS 226
             P   P P  SS S
Sbjct: 183 PRPGPGPGPASSSPS 197

[Close]

BLAST of CmoCh07G002340 vs. ExPASy TrEMBL
Match: A0A5D3CP65 (VQ motif-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007530 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.9e-73
Identity = 161/233 (69.10%), Postives = 185/233 (79.40%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           MKIS   H  S+ T+T++  A+  QPPPP     +I NRS+S NPYP TFVQADTSSFK+
Sbjct: 1   MKIS---HPNSSFTSTSSTTADAFQPPPP-----KILNRSDSTNPYPTTFVQADTSSFKQ 60

Query: 61  VVQMLTGSPETAKQISTP----KTHIPPIKSIPKRQHSTFKLYERRNLLNNFQ-ISPVFA 120
           VVQMLTGSPETAKQISTP    K+ IPPIKSIPKRQHS FKLYERRN L+N Q I+PVFA
Sbjct: 61  VVQMLTGSPETAKQISTPDPPSKSPIPPIKSIPKRQHSNFKLYERRNALHNLQIINPVFA 120

Query: 121 SLTAGFSPRNY--PEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNN--ITINP 180
           S  +     N+  PE+LSP+MLDFPSL+LSPVTPLIPDPF RSQPLN EP+NN   + N 
Sbjct: 121 SSVSSLRNNNHNLPEVLSPSMLDFPSLVLSPVTPLIPDPFGRSQPLNSEPTNNNVSSSNS 180

Query: 181 PVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSA 225
            +DE+AEAKAIREKGFYLHPSPATTPRESEP+LLPLFP+TSP  +P PP SS+
Sbjct: 181 GLDEEAEAKAIREKGFYLHPSPATTPRESEPELLPLFPITSP-PRPGPPPSSS 224

[Close]

BLAST of CmoCh07G002340 vs. NCBI nr
Match: XP_022926800.1 (VQ motif-containing protein 4-like [Cucurbita moschata])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE
Sbjct: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60

Query: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120
           VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG
Sbjct: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120

Query: 121 FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180
           FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK
Sbjct: 121 FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180

Query: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 226
           AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS
Sbjct: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 225

[Close]

BLAST of CmoCh07G002340 vs. NCBI nr
Match: KAG6594599.1 (VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430.6 bits (1106), Expect = 8.1e-117
Identity = 222/226 (98.23%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTT-AAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFK 60
           MKISPRPHQKSTTTTT AAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFK
Sbjct: 1   MKISPRPHQKSTTTTTAAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFK 60

Query: 61  EVVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTA 120
           EVVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTA
Sbjct: 61  EVVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTA 120

Query: 121 GFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEA 180
           GFSPRNYPEILSPTMLDFPSL+LSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEA
Sbjct: 121 GFSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEA 180

Query: 181 KAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 226
           KAIREKGFYLHPSPATTPRESEPQLLPLFPVTSP DQPAPPR SAS
Sbjct: 181 KAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQPAPPRPSAS 226

[Close]

BLAST of CmoCh07G002340 vs. NCBI nr
Match: XP_023517089.1 (VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 221/225 (98.22%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           MKISPRPHQKSTTTTT AAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE
Sbjct: 1   MKISPRPHQKSTTTTT-AAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60

Query: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120
           VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG
Sbjct: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120

Query: 121 FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180
           FSPRNYPEILSPTMLDFP+L+LSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK
Sbjct: 121 FSPRNYPEILSPTMLDFPTLVLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180

Query: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 226
           AIREKGFYLHPSPATTPRESEPQLLPLFPVTSP DQPAPPRSSAS
Sbjct: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQPAPPRSSAS 224

[Close]

BLAST of CmoCh07G002340 vs. NCBI nr
Match: XP_023003679.1 (VQ motif-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 216/225 (96.00%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           MKISPRPHQKST TTT   AANGLQPPP PSPTTRITNRSESANPYPATFVQADTSSFKE
Sbjct: 1   MKISPRPHQKSTNTTT--TAANGLQPPPSPSPTTRITNRSESANPYPATFVQADTSSFKE 60

Query: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120
           VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG
Sbjct: 61  VVQMLTGSPETAKQISTPKTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAG 120

Query: 121 FSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAK 180
           FSPRNYPEILSPTMLDFPSL+LSPVTPLIPDPFRR+QPLNCEPSNNITINPPVDEQAEAK
Sbjct: 121 FSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRTQPLNCEPSNNITINPPVDEQAEAK 180

Query: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQPAPPRSSAS 226
           AIREKGFYLHPSPATTPRESEPQLLPLFPVTSP DQP PPRSSAS
Sbjct: 181 AIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQPGPPRSSAS 223

[Close]

BLAST of CmoCh07G002340 vs. NCBI nr
Match: XP_022925670.1 (VQ motif-containing protein 4-like, partial [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 1.3e-77
Identity = 156/206 (75.73%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 24  LQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQMLTGSPETAKQISTP----K 83
           +QPPPPP P  ++ NRSES NPYP TFVQA+TSSFK+VVQMLTGSPETAKQ+STP    K
Sbjct: 41  VQPPPPPPP--KMMNRSESTNPYPTTFVQANTSSFKQVVQMLTGSPETAKQVSTPDPPSK 100

Query: 84  THIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPS 143
           THIP IKSIP+R HS FKLYERRN L N QI+PVFAS+TAGFSPRN+PEI SP+MLDFPS
Sbjct: 101 THIPSIKSIPQRPHSNFKLYERRNALRNLQINPVFASVTAGFSPRNHPEIHSPSMLDFPS 160

Query: 144 LLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRE 203
           L++SPVTPLIPDPF RSQPLN EPSNN++ NP +D +AEA AIREKGFYLHPSP TTPRE
Sbjct: 161 LVISPVTPLIPDPFGRSQPLNSEPSNNVSSNPGLDVEAEANAIREKGFYLHPSPTTTPRE 220

Query: 204 SEPQLLPLFPVTSPADQPAPPRSSAS 226
           SEPQLLPLFP+TSP  +P P  +S+S
Sbjct: 221 SEPQLLPLFPITSP-PRPGPGPASSS 243

[Close]

BLAST of CmoCh07G002340 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 198.0 bits (502), Expect = 8.2e-51
Identity = 122/234 (52.14%), Postives = 154/234 (65.81%), Query Frame = 0


Query: 4   SPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQ 63
           SPR H  + +   ++++ +     PP +PT  +T RSES NPYP TFVQADTSSFK+VVQ
Sbjct: 16  SPRCHNSNNSCGMSSSSESN---KPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQ 75

Query: 64  MLTGSPETAKQISTPK---TH-------------IPPIKSIPKRQHST-----FKLYERR 123
           MLTGS E  K  S+ K   TH             IPPIK++P ++ S+     F+LYERR
Sbjct: 76  MLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERR 135

Query: 124 NLLNNFQI---SPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPL 183
           N + N +I   +PVF  + + FSPR  PEILSP++LDFPSL+LSPVTPLIPDPF RS   
Sbjct: 136 NSMKNLKINPLNPVFNPVNSAFSPRK-PEILSPSILDFPSLVLSPVTPLIPDPFDRSGSS 195

Query: 184 NCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSP 214
           N  P+         +  AE KA++E+GFYLHPSPATTP + EP+LLPLFPVTSP
Sbjct: 196 NQSPN---------ELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of CmoCh07G002340 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 198.0 bits (502), Expect = 8.2e-51
Identity = 122/234 (52.14%), Postives = 154/234 (65.81%), Query Frame = 0


Query: 4   SPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQ 63
           SPR H  + +   ++++ +     PP +PT  +T RSES NPYP TFVQADTSSFK+VVQ
Sbjct: 16  SPRCHNSNNSCGMSSSSESN---KPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQ 75

Query: 64  MLTGSPETAKQISTPK---TH-------------IPPIKSIPKRQHST-----FKLYERR 123
           MLTGS E  K  S+ K   TH             IPPIK++P ++ S+     F+LYERR
Sbjct: 76  MLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERR 135

Query: 124 NLLNNFQI---SPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPL 183
           N + N +I   +PVF  + + FSPR  PEILSP++LDFPSL+LSPVTPLIPDPF RS   
Sbjct: 136 NSMKNLKINPLNPVFNPVNSAFSPRK-PEILSPSILDFPSLVLSPVTPLIPDPFDRSGSS 195

Query: 184 NCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSP 214
           N  P+         +  AE KA++E+GFYLHPSPATTP + EP+LLPLFPVTSP
Sbjct: 196 NQSPN---------ELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of CmoCh07G002340 vs. TAIR 10
Match: AT2G33780.1 (VQ motif-containing protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.3e-31
Identity = 88/198 (44.44%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 28  PPPSPTTRITNRSESANPYPATFVQADTSSFKEVVQMLTGSPETAKQISTPK----THIP 87
           P PS  T    R    + Y  TF++ D SSFK+VVQ+LTG P+       P+      IP
Sbjct: 16  PSPSSCTTTPTRYVKDDMYETTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIP 75

Query: 88  PIKSIP-KRQHSTFKLYERRNLLNNF-QISPVFASLTAGFSPRNYPEILSPTMLDFPSLL 147
           PIK++  K+Q S+F+L ERRN + ++  I+P  +           PEIL+PT+L+FP+L 
Sbjct: 76  PIKAVTNKKQSSSFRLSERRNSMKHYLNINPTHS---------GPPEILTPTILNFPALD 135

Query: 148 LSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE 207
           LSP TPL+ DPF R    +  PS++    P  D+  E ++I+EKGFYL PSP+TTPR++E
Sbjct: 136 LSPDTPLMSDPFYRPGSFSQSPSDS---KPSFDDDQE-RSIKEKGFYLRPSPSTTPRDTE 195

Query: 208 PQLLPLFPVTSPADQPAP 220
           P+LL LFP+T P   PAP
Sbjct: 196 PRLLSLFPMT-PIHSPAP 199

[Close]

BLAST of CmoCh07G002340 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-30
Identity = 106/245 (43.27%), Postives = 136/245 (55.51%), Query Frame = 0


Query: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60
           M+IS  P   S++++ +++  NG       S    I  RS+    YP TFVQAD+SSFK+
Sbjct: 1   MEISTNP-PSSSSSSVSSSIING-------SLHHHIITRSDH---YPTTFVQADSSSFKQ 60

Query: 61  VVQMLTG-----SPETAKQISTPKTH----IPPIKSIPKRQHSTFKLYERRN---LLNNF 120
           VVQMLTG     SP++ +  +TP       IPPIK+   ++HS  KLYERR+     NN 
Sbjct: 61  VVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKHSGNKLYERRSHGGFNNNL 120

Query: 121 QISPVFASLTAG--------FSPRNYPEILSPTMLDFPSLLL-SPVTPLIP-------DP 180
           + S +  +L  G        FSPRN  EILSP+ LDFP L L SPVTPL         DP
Sbjct: 121 KNSLMINTLMIGGGGAGSPRFSPRN-QEILSPSCLDFPKLALNSPVTPLKQGTNGNEGDP 180

Query: 181 FRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTS 218
           F +  PL+                 E + I +KG+YLH SP +TPR+SEPQLLPLFPVTS
Sbjct: 181 FDKMSPLS----------------EEERGIADKGYYLHRSPISTPRDSEPQLLPLFPVTS 217

[Close]

BLAST of CmoCh07G002340 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-28
Identity = 104/253 (41.11%), Postives = 129/253 (50.99%), Query Frame = 0


Query: 13  TTTTAAAAANGLQPPPPPSPTTRI----------TNRSESANPYPATFVQADTSSFKEVV 72
           +T++ ++    +Q PPP   + R                 +NPYP TFVQADTS+FK+VV
Sbjct: 4   STSSMSSKPEQMQNPPPMISSPRFQPQIISPHHHDQHQHLSNPYPTTFVQADTSTFKQVV 63

Query: 73  QMLTGS---PETAKQISTPKT----------HIPPIKSIPKRQHSTFKLYERRNLLNN-F 132
           QMLTGS     T K    P             IPPIK     + ++FKLYERR   NN F
Sbjct: 64  QMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIK-----KTNSFKLYERRQNNNNMF 123

Query: 133 QISPVFAS-----------LTAG---------FSPRNYPE----ILSPTMLDFPSL-LLS 192
             + +  +            T G         FSPRN       +LSP+MLDFP L L S
Sbjct: 124 AKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSMLDFPKLGLNS 183

Query: 193 PVTPL--IPDPFRRSQPLNCEPSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE 215
           PVTPL    DPF +S PL+   S+            E KAI +KGFYLHPSP +TPR+S+
Sbjct: 184 PVTPLRSNDDPFNKSSPLSLGNSSE-----------EDKAIADKGFYLHPSPVSTPRDSQ 240

The following BLAST results are available for this feature:

BLAST of CmoCh07G002340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5M750	1.2e-49	52.14	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
O23660	4.6e-30	44.44	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q9LDZ1	2.3e-29	43.27	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
Q9FHZ3	2.1e-27	41.11	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
Q9FNP0	7.3e-12	35.63	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]

BLAST of CmoCh07G002340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EM47	6.5e-120	100.00	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433810...	[more]
A0A6J1KU05	5.3e-114	96.00	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497201 P...	[more]
A0A6J1EIU9	6.1e-78	75.73	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433020...	[more]
A0A6J1IR60	3.7e-75	77.95	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478627 P...	[more]
A0A5D3CP65	5.9e-73	69.10	VQ motif-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CmoCh07G002340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926800.1	1.3e-119	100.00	VQ motif-containing protein 4-like [Cucurbita moschata]	[more]
KAG6594599.1	8.1e-117	98.23	VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023517089.1	1.4e-116	98.22	VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003679.1	1.1e-113	96.00	VQ motif-containing protein 4-like [Cucurbita maxima]	[more]
XP_022925670.1	1.3e-77	75.73	VQ motif-containing protein 4-like, partial [Cucurbita moschata]	[more]

BLAST of CmoCh07G002340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28280.1	8.2e-51	52.14	VQ motif-containing protein	[more]
AT1G28280.2	8.2e-51	52.14	VQ motif-containing protein	[more]
AT2G33780.1	3.3e-31	44.44	VQ motif-containing protein	[more]
AT3G15300.1	1.6e-30	43.27	VQ motif-containing protein	[more]
AT5G53830.1	1.5e-28	41.11	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 45..71 e-value: 2.1E-10 score: 39.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..225
IPR039827	VQ motif-containing protein 4/13	PANTHER	PTHR33402:SF16	VQ MOTIF-CONTAINING PROTEIN 13-RELATED	coord: 3..216
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 3..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G002340.1	CmoCh07G002340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus