CmoCh07G001360 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G001360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Coatomer subunit zeta
Location	Cmo_Chr07: 739407 .. 742560 (+)
RNA-Seq Expression	CmoCh07G001360
Synteny	CmoCh07G001360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGCTTCAAAATCCGCCTCATAAACACAAACCTCAACCCATTTCTCCATCTCTTCAATTCGTTTGCAATTTACACACAACTGTAAACAATGGTAAATTCTACCCTTCACTTTTTCCGTATTTGATTTCCCCTCTGTGATTGATAATCTTGCACTTGAGCTCGTTATAGGCGTTGATTTAATTTGATACTACGATCTTCACGTGTGTTTGTCACCGATTTGAACCCATTTCTTCCAATGCTGTTCTCTTTATCTCTCATAATGCTTGATTCGATAGTGTATACTTTTGAGATTGTGATTATAATTGAATCGCTTAGAATCTCTGATCGGATCAAACTAATTCATGCACACACATTCATCTGGGCGCTAATATTTGGTTTTGGAGGTAGAATGATCCGATGTTCAGGATGTTATTAGCAGGAAGATCGCCAATTTTTTTCTCTCCCTCAAATGAACACTGTTATGTTTCTTCCTATCGTGGTTTGCCAGGGTAAACTTTTGAATTCCATATGAGAAGATGAATGAAATTAGATATAAGCTTGCAAAAGTTATTCTGTCGGCTTGGGTTTTGAATCATGATGAACGATTAGAATTTTCTTATGTTAGAGCGGTACCTCACTGTTGCTGGTGCAGCCTGAGTCACTCATAACAAATCCATAATTCTTGCTTGTTTCTTCGTCAAGATCATCCATCGGACGTCTAGGCCACTGCTATAAAACCACTATGATGCTGAATCGCTGATATGCATACCTGTAGTATTACTACAAATACTACGGATTTTCATGTGATGATTCTTTGCTCTGTACGTGGATTTGATGTAGGATTCCTGTCCTTCAATAAAAAATATTCTCCTGTTGGATTCTGACGGGAAACGTGTGGCCGTCAAGTATTACTCAGATGAGTGGCCAACAAATAATGCAAGGGAATCTTTTGAGAAATCTTTATTTAGCAAAACTCAAAAGAGCAATGCTCGAAATGAAGGTAATCCATTGTTTATGGCTTTTTAGCCTCTCTTTTCACCGTCTTAACGTTTCCATGGAACTATTACCTTCTTAGAACCAAGATAGCATTGAGATAAAACAAGAAATATGCTCCAAGTAGTTTTAGAAAAGTTTGATACTTCTATATACTGTTAACTTGTTATTTATTGTTTATCTGCAGCGGAGATAACGATGTTTGAAAGCAATACTGTTGTTTACAAGTTTGTGCAAGACCTACATTTTTTTGTCACTGGTGGAGAATATGAGAATGAGCTCATTTTGGCGACTGTTCTTCAGGGATTCTTCGATGCTGTTGGCCTTCTCCTGAGGTCTTATCTTTATAACACTTATTACTGTTTACTGGTTATCAATTTCCCTGCTGTATTTTCTGTATTTCACTGCGAACTTACGCTCACATTTACTGTATGTTGCTTCTACTTCAGGGGTCACGTGGAAAAGAAGGAAGCACGTGAAAACTTGGAACTTATTTTGTTGTGCCTTGATGAAATTGTTGATGGAGGGTATGTTTTTAGCTTATTTCATGCTTTTAAAGTTAATCAATCCTATTGTTCTGTTTAGTTTTCTTGAGCTTTTAAGCATATTTGTCAAAAATGTACTGTGAATAGTTTTTTAATCCTGATTTTATCTAAAACGTAAGAGATTTAAATACATATATTCGGAATGAAATATGTATACTCGATACAATCGGTTTAGGAGATATCTTACAAGGTTGTTTTATTTGAGTAAGATGTCATCATGGTTGTTTTATGGAATATGGAAGGAAGTTCTAGAACATTGTCATGAGGCACAACTTCCCTCCATGAGCATCACACAAACTAGTAATGAGTTGGACAACCTCACTCGATGAGTATGCTACAAACTAGCAATGAGTTAAAACAGTATTATAGTACTGAAATAGATTTAGTATAGCTGTTCCAACAATTGTTTTGTGTGTTATCTCTTGTCCTTGGCTGCTTGAATAAGATGGAAGTGTATAGAAGTAAGAACTGCATCCAAGGTTGCGTTGATATGGAAACCATTTTTTTGTTAGGAAAGAATCTATCGTTGGTTCTAGTTCTGTTCGTATATCTTGGTATTTGCAAATATCATGATTACTATTGTAGCAAAGCTCTCATTTAAGCATTCTACTTGACCAAATTTACCCTCTTCCTCCACATTGTCATCCAATGATTAAATATTGGTTCCCTAAATGCACTCAAGGAAAACGTTTGTTCGAGCATATTTTCTCCTACTATTATTTTTATGCAAGAAAAATGAAAGGGAATACCTATTAGTGCTAAATATACTTTTGAAAATATTTTATGTTAGTGATAATTAAGTTAACTAGTAACCTCTCTTAAAGATCAGAAGTTTGATTCTCTATCCCTCCCTTTAGTAGAACTTTAAGAGAGGGTCATAGGATGCAACTGCGTTTGATATCTTATTTCATTGAACGGCAATATCACTAGATTTAGATGCAGTGCAAATCCATGATACGTGCATTGCAAGTCTTTTAGTTTGATGTTCCATTTGTCTTTAAAGTTACTCAATTAGTGATGGCACTGGTTGTTTTGCGAGCTAGTTTAAACTGCTTTATATTTATGAAGTATTGTTCTTGAGACCGATGGAAATGTCATTGCTGGGAAAGTTGCAACTCAAAGTATAGATTCTTCAGCTCCTTTGTCTGAGCAGGTATTATTACCCTCTTTCCTGTTTGGGTTTTCCTCAAAGCGATATTTCTAACGTTGAGAATTGAAATGGTAAGACAAATGGATGTAAACCAACTCATTCTTATGCACAGACAATTAGCCAAGCACTGGCAACTGCACGTGAACATCTCACGAAATCTCTTCTTACATGACGTATACGCTTGCTCATGGGGGGAGGAGCATGGAGAAAATACCCTTTGATCCGACTAGTGGTTTAAAACGACACAAAGAGTGGTTCGTTCCCATCACCTTGGAGTTGCATTTTTTTTTTTTCTTTTTTCAGTTTCATAGACAATCTCTCGTAATTTGAAGTTCCTGCTATTGGAACCTTTACTTCATACCTTTCTTTTTCCATAAATGGTGCTTATTGAATTGTTTCGTGTAAACTTGATAAAATTAGATGTCGGAGGTATATTATAGTTCATTAATTGATTTGATTTGAGGATCCATTACTCAAGGATGGCC

mRNA sequence

GGGGGCTTCAAAATCCGCCTCATAAACACAAACCTCAACCCATTTCTCCATCTCTTCAATTCGTTTGCAATTTACACACAACTGTAAACAATGGATTCCTGTCCTTCAATAAAAAATATTCTCCTGTTGGATTCTGACGGGAAACGTGTGGCCGTCAAGTATTACTCAGATGAGTGGCCAACAAATAATGCAAGGGAATCTTTTGAGAAATCTTTATTTAGCAAAACTCAAAAGAGCAATGCTCGAAATGAAGCGGAGATAACGATGTTTGAAAGCAATACTGTTGTTTACAAGTTTGTGCAAGACCTACATTTTTTTGTCACTGGTGGAGAATATGAGAATGAGCTCATTTTGGCGACTGTTCTTCAGGGATTCTTCGATGCTGTTGGCCTTCTCCTGAGGGGTCACGTGGAAAAGAAGGAAGCACGTGAAAACTTGGAACTTATTTTGTTGTGCCTTGATGAAATTGTTGATGGAGGTATTGTTCTTGAGACCGATGGAAATGTCATTGCTGGGAAAGTTGCAACTCAAAGTATAGATTCTTCAGCTCCTTTGTCTGAGCAGACAATTAGCCAAGCACTGGCAACTGCACGTGAACATCTCACGAAATCTCTTCTTACATGACGTATACGCTTGCTCATGGGGGGAGGAGCATGGAGAAAATACCCTTTGATCCGACTAGTGGTTTAAAACGACACAAAGAGTGGTTCGTTCCCATCACCTTGGAGTTGCATTTTTTTTTTTTCTTTTTTCAGTTTCATAGACAATCTCTCGTAATTTGAAGTTCCTGCTATTGGAACCTTTACTTCATACCTTTCTTTTTCCATAAATGGTGCTTATTGAATTGTTTCGTGTAAACTTGATAAAATTAGATGTCGGAGGTATATTATAGTTCATTAATTGATTTGATTTGAGGATCCATTACTCAAGGATGGCC

Coding sequence (CDS)

ATGGATTCCTGTCCTTCAATAAAAAATATTCTCCTGTTGGATTCTGACGGGAAACGTGTGGCCGTCAAGTATTACTCAGATGAGTGGCCAACAAATAATGCAAGGGAATCTTTTGAGAAATCTTTATTTAGCAAAACTCAAAAGAGCAATGCTCGAAATGAAGCGGAGATAACGATGTTTGAAAGCAATACTGTTGTTTACAAGTTTGTGCAAGACCTACATTTTTTTGTCACTGGTGGAGAATATGAGAATGAGCTCATTTTGGCGACTGTTCTTCAGGGATTCTTCGATGCTGTTGGCCTTCTCCTGAGGGGTCACGTGGAAAAGAAGGAAGCACGTGAAAACTTGGAACTTATTTTGTTGTGCCTTGATGAAATTGTTGATGGAGGTATTGTTCTTGAGACCGATGGAAATGTCATTGCTGGGAAAGTTGCAACTCAAAGTATAGATTCTTCAGCTCCTTTGTCTGAGCAGACAATTAGCCAAGCACTGGCAACTGCACGTGAACATCTCACGAAATCTCTTCTTACATGA

Protein sequence

MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT

Homology

[Close]

BLAST of CmoCh07G001360 vs. ExPASy Swiss-Prot
Match: Q84LG4 (Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.8e-69
Identity = 135/176 (76.70%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 2   DSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMFE 61
           DSCP +KNILLLDS+GKRVAVKYYSD+WPTN A+ SFEK +FSKT K+NAR EAEIT+ +
Sbjct: 4   DSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 62  SNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILL 121
           SN +VYKF QDLHFFVTGGE ENELILA+VLQGFFDAV LLLR +VEK EA ENL+LI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 122 CLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           CLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQT++QALATAREHL +SLLT
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLLT 179

[Close]

BLAST of CmoCh07G001360 vs. ExPASy Swiss-Prot
Match: Q6Z844 (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.3e-68
Identity = 130/175 (74.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 2   DSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMFE 61
           +SCPS+KNILLLDS+GKRVAVKY+SD+W +N ++ +FEKS+F+KT K+NAR+EAEIT+F+
Sbjct: 7   ESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLFD 66

Query: 62  SNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILL 121
              VVYKFVQDLHFFVT G+ ENELI+A VLQGF D+VGLLLRG VEK+ A ENL+LILL
Sbjct: 67  GYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILL 126

Query: 122 CLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLL 177
           C+DEIVDGGI+LETD N IAGKVAT ++D SAP SEQTISQALATAREHL +SLL
Sbjct: 127 CIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLL 181

[Close]

BLAST of CmoCh07G001360 vs. ExPASy Swiss-Prot
Match: Q8H1F4 (Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 7.4e-68
Identity = 132/176 (75.00%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 2   DSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMFE 61
           DSCP +KNILLLDS+GKRVAVKYYSD+W TN ++ +FEK +FSKT K+NAR EAEIT+ E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 62  SNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILL 121
           SN VVYKF QDLHFFVTGGE ENEL+L++VLQGFFDAV LLLR +VEK EA ENL+LI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 122 CLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           CLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQT++QALATAREHL +SLLT
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLLT 181

[Close]

BLAST of CmoCh07G001360 vs. ExPASy Swiss-Prot
Match: Q940S5 (Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.3e-67
Identity = 130/176 (73.86%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           M+  P +KNILLLDS+GKRVAVKYYSD+WPTN+A+E+FEKS+F+KTQK+NAR E E+T  
Sbjct: 1   MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTAL 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N VVYKFVQDLHFFVTGGE ENELILA+VL+G FDAV LLLR +V+K+EA +NL+LI 
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIF 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLL 177
           L  DEI+DGGIVLETD NVIAGK    S D +APLSEQTISQALATAREHLT+SL+
Sbjct: 121 LSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLM 176

[Close]

BLAST of CmoCh07G001360 vs. ExPASy Swiss-Prot
Match: Q9MAX5 (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-64
Identity = 126/176 (71.59%), Postives = 152/176 (86.36%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           M+SCPS+KNILLLDS+GKRVAVKYY+D+WPT +A+ +FEKS+F KTQK+ A  EAEI MF
Sbjct: 1   MESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           + + VVYKF+QDLHFFVTGGE ENELILA+VLQGF DAV ++LR +V+K+ A ENL+LIL
Sbjct: 61  DGHIVVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLL 177
           LCLDEIVDGGIVLET+G+VIA KV+   I+ +  L+EQTI QAL TAREHLTKSLL
Sbjct: 121 LCLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176

[Close]

BLAST of CmoCh07G001360 vs. ExPASy TrEMBL
Match: A0A6J1EL47 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111433595 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.5e-90
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF
Sbjct: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL
Sbjct: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. ExPASy TrEMBL
Match: A0A6J1KPX3 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111497203 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.6e-89
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           MDSCPSIKNILLLDS+GKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF
Sbjct: 1   MDSCPSIKNILLLDSEGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL
Sbjct: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. ExPASy TrEMBL
Match: A0A0A0KLW2 (Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_6G522120 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 165/177 (93.22%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           MDSCPSIKNILLLDS+GKRVAVKYYSDEWPTN+ARE+FEK++FSKTQKSNARNEAEI MF
Sbjct: 1   MDSCPSIKNILLLDSEGKRVAVKYYSDEWPTNSARETFEKAVFSKTQKSNARNEAEIAMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N V+YKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LIL
Sbjct: 61  ENNIVIYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEALENLDLIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLT+SLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTRSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. ExPASy TrEMBL
Match: A0A1S3B001 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103484394 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-84
Identity = 164/177 (92.66%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           M+SCPSIKNILLLDS+GKRVAVKYYSDEWPTN+ARE+FEK++FSKTQKSNARNEAEI MF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDEWPTNSARETFEKAVFSKTQKSNARNEAEIAMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N V+YKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LIL
Sbjct: 61  ENNIVIYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEALENLDLIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLT+SLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTRSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. ExPASy TrEMBL
Match: A0A6J1CMD1 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111012451 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.9e-84
Identity = 164/177 (92.66%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           M+SCPSIKNILLLDS+GKRVAVKYYSDEWPTN+A+ESFEK++FSKTQKSNARNEAEI MF
Sbjct: 2   MESCPSIKNILLLDSEGKRVAVKYYSDEWPTNSAKESFEKAVFSKTQKSNARNEAEIAMF 61

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N VVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LIL
Sbjct: 62  ENNIVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEALENLDLIL 121

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDS+APLSEQTISQALATAREHLT+SLLT
Sbjct: 122 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSAAPLSEQTISQALATAREHLTRSLLT 178

[Close]

BLAST of CmoCh07G001360 vs. NCBI nr
Match: XP_022926445.1 (coatomer subunit zeta-2-like [Cucurbita moschata] >KAG6594497.1 Coatomer subunit zeta-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340.1 bits (871), Expect = 1.1e-89
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF
Sbjct: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL
Sbjct: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. NCBI nr
Match: XP_023003681.1 (coatomer subunit zeta-2-like [Cucurbita maxima] >XP_023518939.1 coatomer subunit zeta-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338.6 bits (867), Expect = 3.3e-89
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           MDSCPSIKNILLLDS+GKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF
Sbjct: 1   MDSCPSIKNILLLDSEGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL
Sbjct: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. NCBI nr
Match: XP_004134635.1 (coatomer subunit zeta-2 [Cucumis sativus] >KGN49367.1 hypothetical protein Csa_003043 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 2.4e-84
Identity = 165/177 (93.22%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           MDSCPSIKNILLLDS+GKRVAVKYYSDEWPTN+ARE+FEK++FSKTQKSNARNEAEI MF
Sbjct: 1   MDSCPSIKNILLLDSEGKRVAVKYYSDEWPTNSARETFEKAVFSKTQKSNARNEAEIAMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N V+YKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LIL
Sbjct: 61  ENNIVIYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEALENLDLIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLT+SLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTRSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. NCBI nr
Match: XP_038883879.1 (coatomer subunit zeta-2-like [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 4.2e-84
Identity = 165/177 (93.22%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           MDSCPSIKNILLLDS+GKRVAVKYYSDEWPTN+A+E+FEK++FSKTQKSNARNEAEI MF
Sbjct: 1   MDSCPSIKNILLLDSEGKRVAVKYYSDEWPTNSAKETFEKAVFSKTQKSNARNEAEIAMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N VVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEALENLDLIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLT+SLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTRSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. NCBI nr
Match: XP_008439671.1 (PREDICTED: coatomer subunit zeta-1-like [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 7.1e-84
Identity = 164/177 (92.66%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           M+SCPSIKNILLLDS+GKRVAVKYYSDEWPTN+ARE+FEK++FSKTQKSNARNEAEI MF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDEWPTNSARETFEKAVFSKTQKSNARNEAEIAMF 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N V+YKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LIL
Sbjct: 61  ENNIVIYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEALENLDLIL 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLT+SLLT
Sbjct: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTRSLLT 177

[Close]

BLAST of CmoCh07G001360 vs. TAIR 10
Match: AT3G09800.1 (SNARE-like superfamily protein )

HSP 1 Score: 261.2 bits (666), Expect = 6.2e-70
Identity = 134/176 (76.14%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 2   DSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMFE 61
           DSCP +K ILLLDS+GKRVAVKYYSD+WPTN A+ SFEK +FSKT K+NAR EAEIT+ +
Sbjct: 4   DSCPLVKKILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 62  SNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILL 121
           SN +VYKF QDLHFFVTGGE ENELILA+VLQGFFDAV LLLR +VEK EA ENL+LI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 122 CLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           CLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQT++QALATAREHL +SLLT
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLLT 179

[Close]

BLAST of CmoCh07G001360 vs. TAIR 10
Match: AT4G08520.1 (SNARE-like superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.3e-69
Identity = 132/176 (75.00%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 2   DSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMFE 61
           DSCP +KNILLLDS+GKRVAVKYYSD+W TN ++ +FEK +FSKT K+NAR EAEIT+ E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 62  SNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILL 121
           SN VVYKF QDLHFFVTGGE ENEL+L++VLQGFFDAV LLLR +VEK EA ENL+LI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 122 CLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLLT 178
           CLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQT++QALATAREHL +SLLT
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLLT 181

[Close]

BLAST of CmoCh07G001360 vs. TAIR 10
Match: AT1G60970.1 (SNARE-like superfamily protein )

HSP 1 Score: 257.3 bits (656), Expect = 9.0e-69
Identity = 130/176 (73.86%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 1   MDSCPSIKNILLLDSDGKRVAVKYYSDEWPTNNARESFEKSLFSKTQKSNARNEAEITMF 60
           M+  P +KNILLLDS+GKRVAVKYYSD+WPTN+A+E+FEKS+F+KTQK+NAR E E+T  
Sbjct: 1   MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTAL 60

Query: 61  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELIL 120
           E+N VVYKFVQDLHFFVTGGE ENELILA+VL+G FDAV LLLR +V+K+EA +NL+LI 
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIF 120

Query: 121 LCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAREHLTKSLL 177
           L  DEI+DGGIVLETD NVIAGK    S D +APLSEQTISQALATAREHLT+SL+
Sbjct: 121 LSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLM 176

The following BLAST results are available for this feature:

BLAST of CmoCh07G001360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84LG4	1.8e-69	76.70	Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1	[more]
Q6Z844	3.3e-68	74.29	Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 S...	[more]
Q8H1F4	7.4e-68	75.00	Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1	[more]
Q940S5	1.3e-67	73.86	Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1	[more]
Q9MAX5	1.3e-64	71.59	Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 S...	[more]

BLAST of CmoCh07G001360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL47	5.5e-90	100.00	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111433595 PE=3 SV=1	[more]
A0A6J1KPX3	1.6e-89	99.44	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111497203 PE=3 SV=1	[more]
A0A0A0KLW2	1.2e-84	93.22	Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_6G522120 PE=3 SV=1	[more]
A0A1S3B001	3.4e-84	92.66	Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103484394 PE=3 SV=1	[more]
A0A6J1CMD1	5.9e-84	92.66	Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111012451 PE=3 SV=1	[more]

BLAST of CmoCh07G001360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926445.1	1.1e-89	100.00	coatomer subunit zeta-2-like [Cucurbita moschata] >KAG6594497.1 Coatomer subunit...	[more]
XP_023003681.1	3.3e-89	99.44	coatomer subunit zeta-2-like [Cucurbita maxima] >XP_023518939.1 coatomer subunit...	[more]
XP_004134635.1	2.4e-84	93.22	coatomer subunit zeta-2 [Cucumis sativus] >KGN49367.1 hypothetical protein Csa_0...	[more]
XP_038883879.1	4.2e-84	93.22	coatomer subunit zeta-2-like [Benincasa hispida]	[more]
XP_008439671.1	7.1e-84	92.66	PREDICTED: coatomer subunit zeta-1-like [Cucumis melo]	[more]

BLAST of CmoCh07G001360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09800.1	6.2e-70	76.14	SNARE-like superfamily protein	[more]
AT4G08520.1	5.3e-69	75.00	SNARE-like superfamily protein	[more]
AT1G60970.1	9.0e-69	73.86	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 2..148 e-value: 1.1E-40 score: 140.9
None	No IPR available	PANTHER	PTHR11043:SF30	COATOMER SUBUNIT ZETA-2-LIKE	coord: 1..176
None	No IPR available	CDD	cd14829	Zeta-COP	coord: 8..143 e-value: 8.00649E-70 score: 205.858
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 7..146 e-value: 7.6E-21 score: 74.5
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 1..176
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 7..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G001360.1	CmoCh07G001360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0030126	COPI vesicle coat
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome