CmoCh07G001290 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G001290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Cmo_Chr07: 701442 .. 702239 (-)
RNA-Seq Expression	CmoCh07G001290
Synteny	CmoCh07G001290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTCCACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGCCCATCAAGCTCTCCCCCAACGCCCCCGACGTTCAGGGCAGTTCAAGAATCAGCATGAGGAAGACCGCCTCCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCATCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCCGAGCTTCTCTCCCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGTCTCGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTCTGGCCATCTGGGCCTGCCAGGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGCATTGCCGGCGGTCCCCTCGGGGAGATCACCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCCGATGACCCAGAGGCGTTCGCAGAGCTGAAGGTGAAGGAGCTCAAGAACGGAAGGCTAGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTCGCTGATCCAGTCAACAACAATGCTTGGTCCTACGCCACAAACTTCGTTCCCGGAAAGTGA

mRNA sequence

ATGGCCGCTTCCACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGCCCATCAAGCTCTCCCCCAACGCCCCCGACGTTCAGGGCAGTTCAAGAATCAGCATGAGGAAGACCGCCTCCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCATCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCCGAGCTTCTCTCCCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGTCTCGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTCTGGCCATCTGGGCCTGCCAGGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGCATTGCCGGCGGTCCCCTCGGGGAGATCACCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCCGATGACCCAGAGGCGTTCGCAGAGCTGAAGGTGAAGGAGCTCAAGAACGGAAGGCTAGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTCGCTGATCCAGTCAACAACAATGCTTGGTCCTACGCCACAAACTTCGTTCCCGGAAAGTGA

Coding sequence (CDS)

ATGGCCGCTTCCACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGCCCATCAAGCTCTCCCCCAACGCCCCCGACGTTCAGGGCAGTTCAAGAATCAGCATGAGGAAGACCGCCTCCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCATCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCCGAGCTTCTCTCCCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGTCTCGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTCTGGCCATCTGGGCCTGCCAGGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGCATTGCCGGCGGTCCCCTCGGGGAGATCACCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCCGATGACCCAGAGGCGTTCGCAGAGCTGAAGGTGAAGGAGCTCAAGAACGGAAGGCTAGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTCGCTGATCCAGTCAACAACAATGCTTGGTCCTACGCCACAAACTTCGTTCCCGGAAAGTGA

Protein sequence

MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

Homology

[Close]

BLAST of CmoCh07G001290 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 3.3e-144
Identity = 241/255 (94.51%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 11  PSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70
           P+LAG+ +KLSPNAP++QG+++ +MRKTASK VSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYP 190
           FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWSYATNFVPGK 266
           NNNAW+YATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of CmoCh07G001290 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 3.6e-143
Identity = 245/264 (92.80%), Postives = 255/264 (96.59%), Query Frame = 0


Query: 2   AASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGPF 61
           AAS+MALSSPSLAGK +KL P+AP+V    R+SMRKT +KQVSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLADPVNNNAWSYATNFVPGK 266
           LADHLA PVNNNAW+YATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of CmoCh07G001290 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 2.3e-142
Identity = 237/265 (89.43%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSPS AG+ +KLSP+AP++ G+ R+SMRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.2e-141
Identity = 240/267 (89.89%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTAS--KQVSSGSPWYGPDRVKYL 60
           MAASTMALSSPS AGK +KLSP++ ++ G+ +++MRKTAS  K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           LENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CmoCh07G001290 vs. ExPASy Swiss-Prot
Match: P12333 (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 4.9e-140
Identity = 239/267 (89.51%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTAS--KQVSSGSPWYGPDRVKYL 60
           MA+STMALSSPSLAGK +KL P A ++ G  RI+MRKTA   K V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of CmoCh07G001290 vs. ExPASy TrEMBL
Match: A0A6J1KNR2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111496937 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.7e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. ExPASy TrEMBL
Match: A0A6J1EEU5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433523 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.7e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. ExPASy TrEMBL
Match: A0A6J1EKV1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433524 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.1e-150
Identity = 262/265 (98.87%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG  IKLSPNAPD+QGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGNAIKLSPNAPDIQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. ExPASy TrEMBL
Match: A0A5D3CNU3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008830 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 254/265 (95.85%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK +KLSPNAP++QG+ RI+MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. ExPASy TrEMBL
Match: A0A1S3AZZ0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484386 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 254/265 (95.85%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK +KLSPNAP++QG+ RI+MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. NCBI nr
Match: XP_022926344.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_023003280.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima] >XP_023003281.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima] >KAG6594490.1 hypothetical protein SDJN03_11043, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545.0 bits (1403), Expect = 3.5e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. NCBI nr
Match: XP_023518950.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540.0 bits (1390), Expect = 1.1e-149
Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG  IKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGNAIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. NCBI nr
Match: KAG6594489.1 (hypothetical protein SDJN03_11042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 262/265 (98.87%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG  IKLSPNAPD+QGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGNAIKLSPNAPDIQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. NCBI nr
Match: XP_022926345.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita moschata])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 262/265 (98.87%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG  IKLSPNAPD+QGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGNAIKLSPNAPDIQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. NCBI nr
Match: XP_008439659.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA0052561.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa] >TYK13265.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 531.2 bits (1367), Expect = 5.2e-147
Identity = 254/265 (95.85%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK +KLSPNAP++QG+ RI+MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmoCh07G001290 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 480.3 bits (1235), Expect = 9.8e-136
Identity = 233/266 (87.59%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+L GK +KLSP A +V G+ RI+MRK +     SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLADPVNNNAWSYATNFVPGK 266
           ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of CmoCh07G001290 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 478.0 bits (1229), Expect = 4.9e-135
Identity = 233/267 (87.27%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK +KLSP A +V GS R++MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           +ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmoCh07G001290 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 476.1 bits (1224), Expect = 1.8e-134
Identity = 232/267 (86.89%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK + LSP A +V GS R++MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           +ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmoCh07G001290 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 476.1 bits (1224), Expect = 1.8e-134
Identity = 232/267 (86.89%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK + LSP A +V GS R++MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           +ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmoCh07G001290 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 474.2 bits (1219), Expect = 7.0e-134
Identity = 233/267 (87.27%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MA+STMALSSP+ AGK +K  P A DV GS R++MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of CmoCh07G001290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08221	3.3e-144	94.51	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P09756	3.6e-143	92.80	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P27493	2.3e-142	89.43	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27495	1.2e-141	89.89	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P12333	4.9e-140	89.51	Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1...	[more]

BLAST of CmoCh07G001290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNR2	1.7e-151	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EEU5	1.7e-151	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1EKV1	7.1e-150	98.87	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3CNU3	2.5e-147	95.85	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3AZZ0	2.5e-147	95.85	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of CmoCh07G001290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926344.1	3.5e-151	100.00	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_02...	[more]
XP_023518950.1	1.1e-149	99.25	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita pepo subsp. pepo]	[more]
KAG6594489.1	1.5e-149	98.87	hypothetical protein SDJN03_11042, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022926345.1	1.5e-149	98.87	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita moschata]	[more]
XP_008439659.2	5.2e-147	95.85	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA00...	[more]

BLAST of CmoCh07G001290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	9.8e-136	87.59	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	4.9e-135	87.27	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.8e-134	86.89	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.8e-134	86.89	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	7.0e-134	87.27	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 1.2E-49 score: 168.9
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 7.3E-91 score: 305.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G001290.1	CmoCh07G001290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding