CmoCh07G001270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G001270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH144-like
Location	Cmo_Chr07: 697827 .. 698525 (-)
RNA-Seq Expression	CmoCh07G001270
Synteny	CmoCh07G001270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTCATGCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAACCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTTCCCAAAATTTCATCATCTTTGACCACACGGACGATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAACTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATTGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGTCTCGGGAGCTTGGAGAACTAA

mRNA sequence

ATGGACTTCATGCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAACCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTTCCCAAAATTTCATCATCTTTGACCACACGGACGATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAACTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATTGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGTCTCGGGAGCTTGGAGAACTAA

Coding sequence (CDS)

ATGGACTTCATGCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAACCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTTCCCAAAATTTCATCATCTTTGACCACACGGACGATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAACTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATTGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGTCTCGGGAGCTTGGAGAACTAA

Protein sequence

MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN

Homology

[Close]

BLAST of CmoCh07G001270 vs. ExPASy Swiss-Prot
Match: Q9ASX9 (Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.0e-32
Identity = 94/234 (40.17%), Postives = 133/234 (56.84%), Query Frame = 0


Query: 27  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQNFIIFDHTDDRSQIMFHPAICNK 86
           H      S++ ++ PP  K   P++ VE QPS +C +NF+IFD T DRSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 87  L------------------GGPTANY--EDREIPSPLMEDEDDIDALLSLEDEDHE---- 146
           L                  GG   NY   ++E+ S   ED ++IDALLS  DED+E    
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLS-ADEDYEENDD 138

Query: 147 ---DVDGSEDDEINSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDG 206
              + DG + +E+++AR S  +YGN + +S  SSY      N +      + S+ SS + 
Sbjct: 139 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 198

Query: 207 DMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
              + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

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BLAST of CmoCh07G001270 vs. ExPASy TrEMBL
Match: A0A6J1EHT0 (transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433525 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120
           CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED
Sbjct: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120

Query: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180
           HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM
Sbjct: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180

Query: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of CmoCh07G001270 vs. ExPASy TrEMBL
Match: A0A6J1KSW3 (transcription factor bHLH144-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496938 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120
Identity = 224/232 (96.55%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAF SVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFSSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120
           C QNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSP MED DDIDALLSLEDED
Sbjct: 61  CPQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPSMEDVDDIDALLSLEDED 120

Query: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180
           H+DVDGSEDDEI+SARS LNYGNRSPDSSSSSYSSKPRKNQSVNPVHTA SSGSSCDGDM
Sbjct: 121 HKDVDGSEDDEISSARSHLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 180

Query: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of CmoCh07G001270 vs. ExPASy TrEMBL
Match: A0A6J1KM08 (transcription factor bHLH144-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496938 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 224/247 (90.69%), Postives = 226/247 (91.50%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAF SVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFSSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTA---------------NYEDREIPSPLME 120
           C QNFIIFDHTDDRSQIMFHPAICNKLGGPTA               NYEDREIPSP ME
Sbjct: 61  CPQNFIIFDHTDDRSQIMFHPAICNKLGGPTANMSSKYIQKNSCIDENYEDREIPSPSME 120

Query: 121 DEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNP 180
           D DDIDALLSLEDEDH+DVDGSEDDEI+SARS LNYGNRSPDSSSSSYSSKPRKNQSVNP
Sbjct: 121 DVDDIDALLSLEDEDHKDVDGSEDDEISSARSHLNYGNRSPDSSSSSYSSKPRKNQSVNP 180

Query: 181 VHTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 233
           VHTA SSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL
Sbjct: 181 VHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 240

[Close]

BLAST of CmoCh07G001270 vs. ExPASy TrEMBL
Match: A0A1S3AYV1 (transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 5.0e-99
Identity = 195/249 (78.31%), Postives = 210/249 (84.34%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLN YLK+A  PTA QGD +HMQIPLSSAFPSVLPPGRKNLGPFN VEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTAN----------------YEDREIPSPLM 120
           C QNFIIFDHTD+RSQIMFHPAI NKL GPTAN                YEDREI SPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 121 EDEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSS-YSSKPRKNQSV 180
           ED DDIDALLSLE+E+HE +DGSEDDE+++ARS LNYGN+SPDSSSSS YSSKPRKN S 
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 181 NPVHTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQ 233
           NPVH + SSGSSC  DMKQLKLKKMV+KLREILPGGYQMTT  VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

[Close]

BLAST of CmoCh07G001270 vs. ExPASy TrEMBL
Match: A0A6J1EDR8 (transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.5e-99
Identity = 194/250 (77.60%), Postives = 210/250 (84.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLK AMLPTANQG  +HMQIPLSSA+PSVLPPGR NLGPFN VEFQPSE+
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANY-----------------EDREIPSPL 120
           C QNFIIFDHTD+RSQIMFHPAI NKL GPTAN                  + REI SPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSV 180
           MED DDIDALLSL+DEDHED+DGSED+EI++ARS LNYGN+SPDSSSSSYSSKPRKN+S 
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSF 180

Query: 181 NPVHTALSSG-SSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEV 233
           NPVH   SSG SS D DMKQLK+KKMV+KLREILPGGYQMTT  VLDEAVKYLKSLKDEV
Sbjct: 181 NPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: XP_022926347.1 (transcription factor bHLH144-like [Cucurbita moschata] >XP_022926348.1 transcription factor bHLH144-like [Cucurbita moschata])

HSP 1 Score: 459.1 bits (1180), Expect = 2.2e-125
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120
           CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED
Sbjct: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120

Query: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180
           HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM
Sbjct: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180

Query: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: KAG6594488.1 (Transcription factor basic helix-loop-helix 144, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444.1 bits (1141), Expect = 7.3e-121
Identity = 227/232 (97.84%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120
           C QNFIIFDHT +RSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED
Sbjct: 61  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120

Query: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180
           HEDVDGSEDDEI+SARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTA SSGSSCDGDM
Sbjct: 121 HEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 180

Query: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 231

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: XP_023003284.1 (transcription factor bHLH144-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 441.4 bits (1134), Expect = 4.7e-120
Identity = 224/232 (96.55%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAF SVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFSSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120
           C QNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSP MED DDIDALLSLEDED
Sbjct: 61  CPQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPSMEDVDDIDALLSLEDED 120

Query: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180
           H+DVDGSEDDEI+SARS LNYGNRSPDSSSSSYSSKPRKNQSVNPVHTA SSGSSCDGDM
Sbjct: 121 HKDVDGSEDDEISSARSHLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 180

Query: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: KAG7026477.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 224/232 (96.55%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           M   QSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120
           C QNFIIFDHT +RSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED
Sbjct: 92  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 151

Query: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180
           HEDVDGSEDDEI+SARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTA SSGSSCDGDM
Sbjct: 152 HEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 211

Query: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 212 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 262

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: XP_023003282.1 (transcription factor bHLH144-like isoform X1 [Cucurbita maxima] >XP_023003283.1 transcription factor bHLH144-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 224/247 (90.69%), Postives = 226/247 (91.50%), Query Frame = 0


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAF SVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFSSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTA---------------NYEDREIPSPLME 120
           C QNFIIFDHTDDRSQIMFHPAICNKLGGPTA               NYEDREIPSP ME
Sbjct: 61  CPQNFIIFDHTDDRSQIMFHPAICNKLGGPTANMSSKYIQKNSCIDENYEDREIPSPSME 120

Query: 121 DEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNP 180
           D DDIDALLSLEDEDH+DVDGSEDDEI+SARS LNYGNRSPDSSSSSYSSKPRKNQSVNP
Sbjct: 121 DVDDIDALLSLEDEDHKDVDGSEDDEISSARSHLNYGNRSPDSSSSSYSSKPRKNQSVNP 180

Query: 181 VHTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 233
           VHTA SSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL
Sbjct: 181 VHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 240

[Close]

BLAST of CmoCh07G001270 vs. TAIR 10
Match: AT1G29950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-33
Identity = 94/234 (40.17%), Postives = 133/234 (56.84%), Query Frame = 0


Query: 27  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQNFIIFDHTDDRSQIMFHPAICNK 86
           H      S++ ++ PP  K   P++ VE QPS +C +NF+IFD T DRSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 87  L------------------GGPTANY--EDREIPSPLMEDEDDIDALLSLEDEDHE---- 146
           L                  GG   NY   ++E+ S   ED ++IDALLS  DED+E    
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLS-ADEDYEENDD 138

Query: 147 ---DVDGSEDDEINSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDG 206
              + DG + +E+++AR S  +YGN + +S  SSY      N +      + S+ SS + 
Sbjct: 139 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 198

Query: 207 DMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
              + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of CmoCh07G001270 vs. TAIR 10
Match: AT1G29950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-33
Identity = 94/234 (40.17%), Postives = 133/234 (56.84%), Query Frame = 0


Query: 27  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQNFIIFDHTDDRSQIMFHPAICNK 86
           H      S++ ++ PP  K   P++ VE QPS +C +NF+IFD T DRSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 87  L------------------GGPTANY--EDREIPSPLMEDEDDIDALLSLEDEDHE---- 146
           L                  GG   NY   ++E+ S   ED ++IDALLS  DED+E    
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLS-ADEDYEENDD 138

Query: 147 ---DVDGSEDDEINSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDG 206
              + DG + +E+++AR S  +YGN + +S  SSY      N +      + S+ SS + 
Sbjct: 139 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 198

Query: 207 DMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
              + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of CmoCh07G001270 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.0e-04
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 184 KLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 226
           ++ + ++ L+ ++PGG +M TA +LDEA+ Y+K LK +VQ L
Sbjct: 140 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181

[Close]

BLAST of CmoCh07G001270 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.0e-04
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 184 KLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 226
           ++ + ++ L+ ++PGG +M TA +LDEA+ Y+K LK +VQ L
Sbjct: 143 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184

The following BLAST results are available for this feature:

BLAST of CmoCh07G001270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASX9	5.0e-32	40.17	Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=...	[more]

BLAST of CmoCh07G001270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHT0	1.1e-125	100.00	transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433525 ...	[more]
A0A6J1KSW3	2.3e-120	96.55	transcription factor bHLH144-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1KM08	2.4e-117	90.69	transcription factor bHLH144-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3AYV1	5.0e-99	78.31	transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1	[more]
A0A6J1EDR8	6.5e-99	77.60	transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 ...	[more]

BLAST of CmoCh07G001270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926347.1	2.2e-125	100.00	transcription factor bHLH144-like [Cucurbita moschata] >XP_022926348.1 transcrip...	[more]
KAG6594488.1	7.3e-121	97.84	Transcription factor basic helix-loop-helix 144, partial [Cucurbita argyrosperma...	[more]
XP_023003284.1	4.7e-120	96.55	transcription factor bHLH144-like isoform X2 [Cucurbita maxima]	[more]
KAG7026477.1	1.2e-118	96.55	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023003282.1	4.9e-117	90.69	transcription factor bHLH144-like isoform X1 [Cucurbita maxima] >XP_023003283.1 ...	[more]

BLAST of CmoCh07G001270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29950.1	3.6e-33	40.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G29950.2	3.6e-33	40.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	6.0e-04	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	6.0e-04	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..177
None	No IPR available	PANTHER	PTHR36066:SF11	TRANSCRIPTION FACTOR BHLH144	coord: 4..230
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 193..225 e-value: 1.03529E-8 score: 48.3316
IPR037546	Transcription factor SAC51-like	PANTHER	PTHR36066	TRANSCRIPTION FACTOR BHLH145	coord: 4..230
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 184..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G001270.1	CmoCh07G001270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity