CmoCh07G001190 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh07G001190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	mitochondrial inner membrane protease subunit 1-like
Location	Cmo_Chr07: 669212 .. 671298 (-)
RNA-Seq Expression	CmoCh07G001190
Synteny	CmoCh07G001190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGACTGAGAAAACTGGCGCAGTTGAAACCCATAGCCGAAGAAGCATTGGCCGGAACAGTTTTCTTAGGGAAGCTCCTCTGTGGCCTTCATGTCGCCAACACATACGTCTGCACCGCCGCTCTTGTAAGTTCAATTTTGCGTCTCTTTGAAATCAATGTCTCAGAACGCTTATTTTGAGGGTTTACTTGAGTTGATCTGCGTGTTCCTCTGTGTTTAGACCTACGGTCCCAGCATGCTCCCTACTCTGAACCTAACCGGCGATTTCATCTTGGCCGAACGAATCTCCACTCGTTTTGGCAGAGTCGGCGTCGGAGACATTGTTCTCGTGAGGTCTCCTGAGAACCCTCGCAAAGTAATGGCGAAGCGCTTGATGGGCATGGAAGGTGATTCTGTTACTTATGTTGTAGACCCGAAGAATAACGATTGGCGTGAAACTGTTGTGGTATGGCTGATTAGAATTCTTCTTACTTGCTTCATTTTTTCTGGAGTTTCGTAAATTGTGTGTGTTGTTTAATTGTTGACCTTGTGTTCAATTAGGTTCCTAAGGGACATGTTTGGATAGAGGGAGATAACATGTATGATTCAAAGGATTCAAGATATTTTGGGGCCGTCCCATATGGTCTTCTGCAAGGGAAAGTATTCTGGAGGGTAAGTGTGATGAATGTTCTAATTCCTTTCCATCAAGAAAAATGGTTGTTGATCCAATGCTAGTATGCTTGTTCATAACAAAAATCCATTACTAGTATGCAGGGATTATGTGGTTCTGTGTTCTGTTTGCATTCAGAGTACAAATGGATACTGATAATGAAGCTGAAAATGTCATAGATGATGCCTTGAAGAATGGTCCTAAAGTAATGAATTTTAGTTTTTCTTATGGTAAAACAGCTCCCTGAATTGGTCGGTCACTGTAACAGCCCAACTCCATCTGGTTACTTATCACCATCAGTCTCACGGTTTTAAAACGCTTTGATAGGAAGAGGTCTCCACACCCTTATAAGAAATGCTCCGTTCCTCCCGTCAGCCTCACGATTTTAAAACGCGTCTGTTAGGGAGAGGTTCCCACACCCTTATAAATATGTTTTGTTTTCCTCTCCAACCGATGTGGGATCTCATAGTCACAAGTGGATCAAATATTAGCATGATTAGGAGACTTAAACGTGTTTGGGAGACTGCATGGAAAGTAGTTTTCTGCTTTTCAACACAGATTTTAGAAACTCTTATCAGAAGGGTGTTGTGAAAATTGAAGTTTATGCACTTAGAATACCATGTTGTCTAGGAAATCCATGAAGACAAAGCATAAGGCATAAGCGAAAAGTAGTCCTCAAAGGGGCAAAAGACTGCCTTATTCGATATGATTTGCATGATAGATCTCTAAGAGATAGCAATAACTCATACAAATAGCTACACCCTAAGCTAGTCCTCGTAGATGCAGCCTTATGTTTCAGTGACATTTCTAAATCTATTATGCATTGTTACTTTCGATTTTTCGATTTATTATCATTATAATTGCTTTCATCGTCTTAAAATAGCTTCTGATATATCTTTTGTGCGTAGTTGTGGCCACCTAAAAGTTTTGGACCGTTGGAGAAGAGGAAACCGAATGAGACAGTCTTATGAGGTAAGCTCAAACGCTCTCTAGTGACGCACTCTAGGAATGAGACAACTAAACAACACGATTCTTTTCCCCTTAGTTGTTGGGAATCACAAGTTTTTCCTTTTCCTTCTTTGTTTTTTTGTTTCTTTTGCTCCCCTGCTATTCGGTAAACGTTTGTTCTTCTGTTTTCCTTCAGAAGCTATCTTATCGTTGTCGTTCGTCGAGATTGCTTACGTCTCTTTACATTAGTGATTAACGAAGATTCGGGTGACTTGAAATTCTTCATAATATTCCTATATGGTGTCTGGAAGTTGCTTGGAGCTCCCTTGTCGTGGATGTTCATTAGTTCATTTCTGAAACTACCATCTCTCTGACGATTCCCAATCTCATTTTTAAGCCTTGGAACAATGATGGAATGCATTTGATGAACAGAGATTCTTGTAGTTTGTAACTTGTTCTCCATTTTGTAATAAGAGGGTCACTGTAA

mRNA sequence

ATGGGTGGACTGAGAAAACTGGCGCAGTTGAAACCCATAGCCGAAGAAGCATTGGCCGGAACAGTTTTCTTAGGGAAGCTCCTCTGTGGCCTTCATGTCGCCAACACATACGTCTGCACCGCCGCTCTTACCTACGGTCCCAGCATGCTCCCTACTCTGAACCTAACCGGCGATTTCATCTTGGCCGAACGAATCTCCACTCGTTTTGGCAGAGTCGGCGTCGGAGACATTGTTCTCGTGAGGTCTCCTGAGAACCCTCGCAAAGTAATGGCGAAGCGCTTGATGGGCATGGAAGGTGATTCTGTTACTTATGTTGTAGACCCGAAGAATAACGATTGGCGTGAAACTGTTGTGGTTCCTAAGGGACATGTTTGGATAGAGGGAGATAACATGTATGATTCAAAGGATTCAAGATATTTTGGGGCCGTCCCATATGGTCTTCTGCAAGGGAAAGTATTCTGGAGGGTAAGTGTGATGAATGTTCTAATTCCTTTCCATCAAGAAAAATGGTTGTTGATCCAATGCTAAGTACAAATGGATACTGATAATGAAGCTGAAAATGTCATAGATGATGCCTTGAAGAATGGTCCTAAATTGTGGCCACCTAAAAGTTTTGGACCGTTGGAGAAGAGGAAACCGAATGAGACAGTCTTATGAGAAGCTATCTTATCGTTGTCGTTCGTCGAGATTGCTTACGTCTCTTTACATTAGTGATTAACGAAGATTCGGGTGACTTGAAATTCTTCATAATATTCCTATATGGTGTCTGGAAGTTGCTTGGAGCTCCCTTGTCGTGGATGTTCATTAGTTCATTTCTGAAACTACCATCTCTCTGACGATTCCCAATCTCATTTTTAAGCCTTGGAACAATGATGGAATGCATTTGATGAACAGAGATTCTTGTAGTTTGTAACTTGTTCTCCATTTTGTAATAAGAGGGTCACTGTAA

Coding sequence (CDS)

ATGGGTGGACTGAGAAAACTGGCGCAGTTGAAACCCATAGCCGAAGAAGCATTGGCCGGAACAGTTTTCTTAGGGAAGCTCCTCTGTGGCCTTCATGTCGCCAACACATACGTCTGCACCGCCGCTCTTACCTACGGTCCCAGCATGCTCCCTACTCTGAACCTAACCGGCGATTTCATCTTGGCCGAACGAATCTCCACTCGTTTTGGCAGAGTCGGCGTCGGAGACATTGTTCTCGTGAGGTCTCCTGAGAACCCTCGCAAAGTAATGGCGAAGCGCTTGATGGGCATGGAAGGTGATTCTGTTACTTATGTTGTAGACCCGAAGAATAACGATTGGCGTGAAACTGTTGTGGTTCCTAAGGGACATGTTTGGATAGAGGGAGATAACATGTATGATTCAAAGGATTCAAGATATTTTGGGGCCGTCCCATATGGTCTTCTGCAAGGGAAAGTATTCTGGAGGGTAAGTGTGATGAATGTTCTAATTCCTTTCCATCAAGAAAAATGGTTGTTGATCCAATGCTAA

Protein sequence

MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRVSVMNVLIPFHQEKWLLIQC

Homology

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BLAST of CmoCh07G001190 vs. ExPASy Swiss-Prot
Match: Q9CQU8 (Mitochondrial inner membrane protease subunit 1 OS=Mus musculus OX=10090 GN=Immp1l PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 51/128 (39.84%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 29  CGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGRVGVGDIVLVRSPENPRK 88
           C  H A  YV    +  GPSM PT+    D + AE +S  F  +  GDIV+ +SP +P+ 
Sbjct: 21  CIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKS 80

Query: 89  VMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLL 148
            + KR++G+EGD +  +    ++ ++    VP GHVW+EGDN+ +S DSRY+G +PYGL+
Sbjct: 81  NICKRVIGLEGDKI--LSTSPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRYYGPIPYGLI 140

Query: 149 QGKVFWRV 157
           +G++F+++
Sbjct: 141 RGRIFFKI 145

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BLAST of CmoCh07G001190 vs. ExPASy Swiss-Prot
Match: Q96LU5 (Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens OX=9606 GN=IMMP1L PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23
Identity = 50/128 (39.06%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 29  CGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGRVGVGDIVLVRSPENPRK 88
           C  H A  YV    +  GPSM PT+    D + AE +S  F  +  GDIV+ +SP +P+ 
Sbjct: 21  CIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKS 80

Query: 89  VMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLL 148
            + KR++G+EGD +  +    ++ ++    VP GHVW+EGDN+ +S DSR +G +PYGL+
Sbjct: 81  NICKRVIGLEGDKI--LTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIPYGLI 140

Query: 149 QGKVFWRV 157
           +G++F+++
Sbjct: 141 RGRIFFKI 145

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BLAST of CmoCh07G001190 vs. ExPASy Swiss-Prot
Match: O74800 (Mitochondrial inner membrane protease subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=imp1 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.4e-23
Identity = 53/127 (41.73%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 31  LHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGR-VGVGDIVLVRSPENPRKV 90
           +H  + Y+    +T GPSM+PTLN  G+F+L +++  RF R   VGD+V+   P + ++ 
Sbjct: 18  VHQIHEYLFQVQMTSGPSMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSKQH 77

Query: 91  MAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQ 150
           + KR++GM GD  T  VDP +++  + + +P GHVW+ GDN+  S DSR +G VP GL++
Sbjct: 78  VCKRIIGMPGD--TIYVDPTSSN--KKITIPLGHVWLAGDNIAHSLDSRNYGPVPMGLIK 137

Query: 151 GKVFWRV 157
            KV  RV
Sbjct: 138 AKVIARV 140

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BLAST of CmoCh07G001190 vs. ExPASy Swiss-Prot
Match: Q28I39 (Mitochondrial inner membrane protease subunit 1 OS=Xenopus tropicalis OX=8364 GN=immp1l PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.8e-21
Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 29  CGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGRVGVGDIVLVRSPENPRK 88
           C  H A  Y+    +  GPSM PT+    D +L + +S  F  +  GDI++ +SP+ P  
Sbjct: 21  CIAHCAFEYIGEVVICSGPSMEPTIR-NYDVLLCDNLSRHFFSIHKGDIIVAKSPDKPSV 80

Query: 89  VMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLL 148
            + KR++G+EGD V  +  P     R T  VPKGHVW+EGDN+ +S DSR +G VPY L+
Sbjct: 81  NICKRVIGLEGDKVC-MSSPSALLKRHT-YVPKGHVWLEGDNLDNSTDSRSYGPVPYALI 140

Query: 149 QGKVFWRV 157
           +G++  RV
Sbjct: 141 RGRICLRV 145

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BLAST of CmoCh07G001190 vs. ExPASy Swiss-Prot
Match: P28627 (Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IMP1 PE=1 SV=3)

HSP 1 Score: 92.8 bits (229), Expect = 4.1e-18
Identity = 53/153 (34.64%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 28  LCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGRVGVGDIVLVRSPENPR 87
           LC LH+ + Y      T G SMLPTL+ T D++   +       + +GD ++   P +P 
Sbjct: 20  LCFLHIIHMYAYEFTETRGESMLPTLSATNDYVHVLKNFQNGRGIKMGDCIVALKPTDPN 79

Query: 88  KVMAKRLMGMEGD--------SVTYVVDPKNNDWR--ETVVVPKGHVWIEGDNMYDSKDS 147
             + KR+ GM GD         V YV D   ++ R    + VP+GHVW+ GDN+  S DS
Sbjct: 80  HRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTYIKVPEGHVWVTGDNLSHSLDS 139

Query: 148 RYFGAVPYGLLQGKV---------FWRVSVMNV 162
           R + A+P GL+ GK+         FW  S+ N+
Sbjct: 140 RTYNALPMGLIMGKIVAANNFDKPFWDGSIRNI 172

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BLAST of CmoCh07G001190 vs. ExPASy TrEMBL
Match: A0A6J1EKV6 (mitochondrial inner membrane protease subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433526 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP
Sbjct: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWR+
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRL 156

[Close]

BLAST of CmoCh07G001190 vs. ExPASy TrEMBL
Match: A0A6J1KRC7 (mitochondrial inner membrane protease subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496939 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MGGLRKL++LKPIAEEALAGTVFL KLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLSKLKPIAEEALAGTVFLAKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
            AERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDW ETVVVP
Sbjct: 61  FAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWCETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWR+
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRL 156

[Close]

BLAST of CmoCh07G001190 vs. ExPASy TrEMBL
Match: A0A1S3AZY4 (mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103484382 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 134/156 (85.90%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLRKLA+LKPI  EALAGT+F+GKL CGLHVANTY+CTA  TYGPSMLPTLNLTGDF+
Sbjct: 1   MAGLRKLARLKPIVNEALAGTIFVGKLFCGLHVANTYICTATFTYGPSMLPTLNLTGDFV 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKV+ KRL+GMEGDSVTYVVDPKN+DW ETVVVP
Sbjct: 61  LAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVDPKNSDWSETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDN+YDS+DSR FGAVPYGLLQGK+FWR+
Sbjct: 121 KGHVWIEGDNIYDSRDSRNFGAVPYGLLQGKIFWRI 156

[Close]

BLAST of CmoCh07G001190 vs. ExPASy TrEMBL
Match: A0A5A7UEG7 (Mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001600 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 134/156 (85.90%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLRKLA+LKPI  EALAGT+F+GKL CGLHVANTY+CTA  TYGPSMLPTLNLTGDF+
Sbjct: 1   MAGLRKLARLKPIVNEALAGTIFVGKLFCGLHVANTYICTATFTYGPSMLPTLNLTGDFV 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKV+ KRL+GMEGDSVTYVVDPKN+DW ETVVVP
Sbjct: 61  LAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVDPKNSDWSETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDN+YDS+DSR FGAVPYGLLQGK+FWR+
Sbjct: 121 KGHVWIEGDNIYDSRDSRNFGAVPYGLLQGKIFWRI 156

[Close]

BLAST of CmoCh07G001190 vs. ExPASy TrEMBL
Match: A0A5D3CPC4 (Mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008880 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.2e-75
Identity = 133/156 (85.26%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLRKLA+LKPI  EALAGT+F+GKL CGLHVANTY+CTA  TYGPSM+PTLNLTGDF+
Sbjct: 1   MAGLRKLARLKPIVNEALAGTIFVGKLFCGLHVANTYICTATFTYGPSMIPTLNLTGDFV 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKV+ KRL+GMEGDSVTYVVDPKN+DW ETVVVP
Sbjct: 61  LAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVDPKNSDWSETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDN+YDS+DSR FGAVPYGLLQGK+FWR+
Sbjct: 121 KGHVWIEGDNIYDSRDSRNFGAVPYGLLQGKIFWRI 156

[Close]

BLAST of CmoCh07G001190 vs. NCBI nr
Match: XP_022926349.1 (mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926350.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926351.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926353.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926354.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 3.2e-84
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP
Sbjct: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWR+
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRL 156

[Close]

BLAST of CmoCh07G001190 vs. NCBI nr
Match: XP_023517480.1 (mitochondrial inner membrane protease subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023517481.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81
Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MGGLRKLAQLKPIAEEALAGTVFL KLL GLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLAQLKPIAEEALAGTVFLAKLLAGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDW ETVVVP
Sbjct: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWCETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWR+
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRL 156

[Close]

BLAST of CmoCh07G001190 vs. NCBI nr
Match: XP_023003285.1 (mitochondrial inner membrane protease subunit 1-like [Cucurbita maxima] >XP_023003286.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita maxima])

HSP 1 Score: 312.4 bits (799), Expect = 2.5e-81
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MGGLRKL++LKPIAEEALAGTVFL KLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLSKLKPIAEEALAGTVFLAKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
            AERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDW ETVVVP
Sbjct: 61  FAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWCETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWR+
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRL 156

[Close]

BLAST of CmoCh07G001190 vs. NCBI nr
Match: XP_038882983.1 (mitochondrial inner membrane protease subunit 1-like [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 140/156 (89.74%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLR+LAQLKPIAEEALAGTVF+ K LCGLHVANTY+CTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MAGLRRLAQLKPIAEEALAGTVFVAKFLCGLHVANTYICTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LA+R+STRFGRVGVGDIVLV+SPENPRKVMAKRLMGMEGDSVTYVVDPKN+DW ETVVVP
Sbjct: 61  LADRLSTRFGRVGVGDIVLVKSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDWCETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDN+YDS DSR+FGAVPYGLLQGK+FWR+
Sbjct: 121 KGHVWIEGDNIYDSNDSRHFGAVPYGLLQGKIFWRI 156

[Close]

BLAST of CmoCh07G001190 vs. NCBI nr
Match: XP_008439652.1 (PREDICTED: mitochondrial inner membrane protease subunit 1-like [Cucumis melo] >XP_016899161.1 PREDICTED: mitochondrial inner membrane protease subunit 1-like [Cucumis melo] >KAA0052556.1 mitochondrial inner membrane protease subunit 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 2.7e-75
Identity = 134/156 (85.90%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLRKLA+LKPI  EALAGT+F+GKL CGLHVANTY+CTA  TYGPSMLPTLNLTGDF+
Sbjct: 1   MAGLRKLARLKPIVNEALAGTIFVGKLFCGLHVANTYICTATFTYGPSMLPTLNLTGDFV 60

Query: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKV+ KRL+GMEGDSVTYVVDPKN+DW ETVVVP
Sbjct: 61  LAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVDPKNSDWSETVVVP 120

Query: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           KGHVWIEGDN+YDS+DSR FGAVPYGLLQGK+FWR+
Sbjct: 121 KGHVWIEGDNIYDSRDSRNFGAVPYGLLQGKIFWRI 156

[Close]

BLAST of CmoCh07G001190 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 177.6 bits (449), Expect = 9.0e-45
Identity = 81/153 (52.94%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 4   LRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAE 63
           L  L Q +  A+EA      + K LC LHV + Y+ +    +GPSMLPTLNLTGD ILAE
Sbjct: 6   LSYLKQWRGTAKEAFENVSIVAKFLCLLHVTDRYIISTTHVHGPSMLPTLNLTGDVILAE 65

Query: 64  RISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGH 123
            +S RFG++G+GD+VLVRSP +P++++ KR++G+EGD +T+  DP   D   +V+VPKGH
Sbjct: 66  HLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEGDRLTFSADPLVGDASVSVLVPKGH 125

Query: 124 VWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
           VWI+GDN+Y S DSR+FG VPY L++GK   RV
Sbjct: 126 VWIQGDNLYASTDSRHFGPVPYSLIEGKALLRV 158

[Close]

BLAST of CmoCh07G001190 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.2e-42
Identity = 74/143 (51.75%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 14  AEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGRVG 73
           + EA+   +F+ K+ C LHV   Y+   A  YGPSM+PTL+ +G+ +LAERIS R+ +  
Sbjct: 13  SREAMKSGMFVAKVYCFLHVTTNYLGFMAYAYGPSMIPTLHPSGNMLLAERISKRYQKPS 72

Query: 74  VGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYD 133
            GDIV++RSPENP K   KR++G+EGD +++V+DP  +D  +T+VVPKGHV+++GD  ++
Sbjct: 73  RGDIVVIRSPENPNKTPIKRVVGVEGDCISFVIDPVKSDESQTIVVPKGHVFVQGDYTHN 132

Query: 134 SKDSRYFGAVPYGLLQGKVFWRV 157
           S+DSR FG VPYGL+QG+V WRV
Sbjct: 133 SRDSRNFGPVPYGLIQGRVLWRV 155

[Close]

BLAST of CmoCh07G001190 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 75/143 (52.45%), Postives = 105/143 (73.43%), Query Frame = 0


Query: 14  AEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERISTRFGRVG 73
           + EA+   V L KL C LHV   Y+   A  YGPSM PTL+ +G+ +LAERIS R+ +  
Sbjct: 13  SREAMKSGVLLAKLYCFLHVTTNYLGFMAYAYGPSMTPTLHPSGNVLLAERISKRYQKPS 72

Query: 74  VGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYD 133
            GDIV++RSPENP K   KR++G+EGD +++V+D + +D  +T+VVPKGHV+++GD  ++
Sbjct: 73  RGDIVVIRSPENPNKTPIKRVIGIEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHN 132

Query: 134 SKDSRYFGAVPYGLLQGKVFWRV 157
           S+DSR FG VPYGL+QG+V WRV
Sbjct: 133 SRDSRNFGTVPYGLIQGRVLWRV 155

[Close]

BLAST of CmoCh07G001190 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-36
Identity = 65/108 (60.19%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 49  MLPTLNLTGDFILAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDP 108
           MLPTLNLTGD ILAE +S RFG++G+GD+VLVRSP +P++++ KR++G+EGD +T+  DP
Sbjct: 1   MLPTLNLTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEGDRLTFSADP 60

Query: 109 KNNDWRETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRV 157
              D   +V+VPKGHVWI+GDN+Y S DSR+FG VPY L++GK   RV
Sbjct: 61  LVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLRV 108

[Close]

BLAST of CmoCh07G001190 vs. TAIR 10
Match: AT3G08980.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 23  FLGKLLCGLHVANTYVCTAALTYGPSMLPTLN-----LTGDFILAERISTRFGRVGVGDI 82
           F G ++ GL +++   C+     G SM PT N        D++L ++   +  +   GD+
Sbjct: 15  FTGSII-GLTISDR-CCSVVPVRGDSMSPTFNPQRNSYLDDYVLVDKFCLKDYKFARGDV 74

Query: 83  VLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVPKGHVWIEGDNMYDSKDS 142
           V+  SP +      KR++GM G+ +        +  R+ + VP+GH W+EGDN   S DS
Sbjct: 75  VVFSSPTHFGDRYIKRIVGMPGEWI--------SSSRDVIRVPEGHCWVEGDNKTSSLDS 134

Query: 143 RYFGAVPYGLLQGKV 153
           R FG +P GL+QG+V
Sbjct: 135 RSFGPIPLGLIQGRV 139

The following BLAST results are available for this feature:

BLAST of CmoCh07G001190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQU8	2.2e-24	39.84	Mitochondrial inner membrane protease subunit 1 OS=Mus musculus OX=10090 GN=Immp...	[more]
Q96LU5	1.9e-23	39.06	Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens OX=9606 GN=IMMP1...	[more]
O74800	9.4e-23	41.73	Mitochondrial inner membrane protease subunit 1 OS=Schizosaccharomyces pombe (st...	[more]
Q28I39	8.8e-21	41.41	Mitochondrial inner membrane protease subunit 1 OS=Xenopus tropicalis OX=8364 GN...	[more]
P28627	4.1e-18	34.64	Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces cerevisiae (str...	[more]

BLAST of CmoCh07G001190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKV6	1.5e-84	99.36	mitochondrial inner membrane protease subunit 1-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KRC7	1.2e-81	96.15	mitochondrial inner membrane protease subunit 1-like OS=Cucurbita maxima OX=3661...	[more]
A0A1S3AZY4	1.3e-75	85.90	mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7UEG7	1.3e-75	85.90	Mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo var. makuwa...	[more]
A0A5D3CPC4	2.2e-75	85.26	Mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo var. makuwa...	[more]

BLAST of CmoCh07G001190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926349.1	3.2e-84	99.36	mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_02...	[more]
XP_023517480.1	1.5e-81	97.44	mitochondrial inner membrane protease subunit 1-like [Cucurbita pepo subsp. pepo...	[more]
XP_023003285.1	2.5e-81	96.15	mitochondrial inner membrane protease subunit 1-like [Cucurbita maxima] >XP_0230...	[more]
XP_038882983.1	1.3e-77	89.74	mitochondrial inner membrane protease subunit 1-like [Benincasa hispida]	[more]
XP_008439652.1	2.7e-75	85.90	PREDICTED: mitochondrial inner membrane protease subunit 1-like [Cucumis melo] >...	[more]

BLAST of CmoCh07G001190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53530.1	9.0e-45	52.94	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G23465.1	4.2e-42	51.75	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	1.2e-41	52.45	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.2	2.0e-36	60.19	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT3G08980.1	2.5e-15	33.33	Peptidase S24/S26A/S26B/S26C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 119..138 score: 48.45 coord: 37..53 score: 34.31 coord: 90..102 score: 42.86
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 112..155 e-value: 6.7E-9 score: 35.9 coord: 32..104 e-value: 2.2E-12 score: 47.2
IPR019533	Peptidase S26	CDD	cd06530	S26_SPase_I	coord: 46..152 e-value: 2.19737E-23 score: 86.4855
None	No IPR available	GENE3D	2.10.109.10	Umud Fragment, subunit A	coord: 34..170 e-value: 3.5E-26 score: 93.6
None	No IPR available	PANTHER	PTHR12383	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	coord: 4..165
None	No IPR available	PANTHER	PTHR12383:SF30	PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN	coord: 4..165
IPR019758	Peptidase S26A, signal peptidase I, conserved site	PROSITE	PS00761	SPASE_I_3	coord: 124..137
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 36..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G001190.1	CmoCh07G001190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006627	protein processing involved in protein targeting to mitochondrion
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042720	mitochondrial inner membrane peptidase complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity