CmoCh07G000840 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G000840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr07: 516646 .. 519303 (+)
RNA-Seq ExpressionCmoCh07G000840
SyntenyCmoCh07G000840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAATATGAAACGGATCGGCAATTTAAGTTCGGTGGTTATGGAGGCTGAAGAGTCTACTAATGAAGAAGAGGAAGGTGTGGATGTTGATAATGACGGGGATCTTTTGGTGTCTAATATGTCTGATAGAAATCATGGATAAGGAAATGATTTCAAAAGAGTTGAAACTGGTGAAGATGTATTTAGATATCCCTTAGTGAAAGATGCCTGTAAATTGATCCAGCTAAGTTCCTCTTGGAATCGGAAGTTTGAAGGGGAGTTGAGGCATTTAGTGTAAGAAGCCTTAATCCGCCACAGGTTTGTGTTGTTTTGTTCTCTCAGGATGGCAAAAGAATTGCTTTGATATTCTTGTATTGGGCAGATAGATTGTGGCGGTACAGACATGATTCATTCGTTAACTTGCAGGAGATTAACCTAATTTGTCTATTTTTAACACTGCAATCCATATTAAAGAGTAAAAGAAGGCATTGAGGTTTGCAGAACGTAGGTTCTAATTGGCATTGCTCCAAATGTTGTGAGCTATAACTGTTTTATCAAGGGCTATTGTAACTTGCATCAGGGTGACCAAGCCAACTGATTGCTCAAATGCCATCTAAGGGATGCTCCCCAGATAAAATTAGTTGCTATAATTTCATGGGATTTCTCTGTAGACACAAGAGGATGAATGAAATTAGGGAGCTGATGAAGAAAATGAGAATGGATAGTGACTTATTTCCAGGCCATGTTACTTACAATTCTCTAATCCAGATGCTTTCCAAGCATGACCACGGAGATGAGGCTTTAGAGATTCTTAGAGAAGCTGAATAATTGTAATGTAAAATTGACAAGGTCGAGTATAGTGCAATAGTTCATGCATATTGCAAGGAAGGAAAGATTAAGAAGGCAAAAGAGCTTGTTGGTGAAATGTTCTTCAAGGGATGTGCTCCAGATGTTGTAACATGCACCTCTATCCTTGACAGGTTTTGACGCATTGGGAAACTTGATCAAGCACAAAGAGATGATGCAGCAGATGTATTAGTATCACTGCAAACCTAATGCTATAACATTTACAAAATTGCTAAATGGTTTATGCCGAAATTGAAAATCATTAGAAGTTAGAGTGATGATGAACACGAGTGAGACCACCTAATGCTATCACTTATAGCACTGTGGTTCATGGGTTACGCCTGAAAGGGAAATTGCATGAAGCCTGTCAGGGAGGTGATTGGAAAAGGTTTCTTTCCAAATCTAGTTGAAATCAACTTATTGGCGCAGTCTCTTTGCCGGGATGGGCAACCACATGAAGCTCAGCAGTTACTCATGGAGTGCATGAACAAGGGTTGTGCTGTTAACGTAGTCAATTTCTCCACTGTCATTCATGGATTTGGTCAGAAAGATGATTTGGAAGCTGCACTGTCATTGTGGGATGATATGTACTTTTGTAACAAGGACCCTGGTTCTGTGACATACACAACATTAATTGATGCACTAGGCAAAGCTGGCCGTATAGAAGACGCCACTGAACTTTCAATGAAGATGCTGAGGCAAGGGTTGGCTCCTTCTCCTGTTACATACAGGCCTGTCATCCACCAGTATTGTCGAAAGGGTAGGGTAGAAGATTTGATGAAATTATTGAAGAACATGATTTCAAAAGGCAGATTTCAAACCCTATTTAATCTAGTTATTGAGAAACTTTGTAAATTTGGATACCTTAAAGAGGCCGACAGCCTTTTAGGTGAGGGTTTGAGGACGGCTTCAAGAACTGATGCTAAAACTTGTCATGTTTATTTAAGTGTTGGAATTCCTATGTCAACATATACAGTTTCTTGTCAAATGTTCAATAGAAATCTACTTCCTGATTTATTGTTATGTGAGAAGGTAAGCAGGAGACTTCTTATAGGAGGAAAATTGGAGGAGGCCGATAGGCTTGTATTACGGTTTGTAGAGCGTGATTGTGTTTTGTCTCAAGATCAAAAGCACTTGCAGGACTAAGATTTCTAATAATCTATCTTGGTTGACTTCATGTTTACATCATATTTCTGTGCTGTGAGTTGCATAAATCTGCTTCCAGGTTTCAGAATTCTTATCATTTGCTTCGTGGTGGTTCTTCATGATATTTTGTTTAGCATGATGTTCTCACAAGTGAATATTTGGAATTGTTGGACGCATCATGTATTTCTCTTGTAATTTTGATTGAAGATGTCAGGTGCTATAATCACCATGGTTGGCTCTATGGCAAAGATTAGTTGCACACGCACATTTTTTAGTTTATGCAGATCTTAGTAGCTATTACCGAACATTGATGTCCTGTGAGTTTTTACCATTCTCTAATTACTGCAGAGCTAGGTAATAGTCTTCCGGAATTTATTAAGAGTAGATCCGATCCAGTTTATCCAAATACCCCCGTGAGCAAATTACACAACGAAGGAACAAAGGACGAAAAGAAGATACCTGCTGCTTTAAAGGTTTCAATATCATGTCAGTGTAATAGTTGGCATACATTCAATTTCTTGTTCCTTGTGCCACTGGGGTTGAGTTTTAGGAACTCAAGGGTGTTTTTTTTTTTTTTTTCGAAATATACGATACACAAACCTATGACTTAAGTTTCCGCCCCCCCTCAAAAGTTTCAATGTGCTAAACTGGAATGGGTGTCTATGTAGGTTGGAATTGCATGTAA

mRNA sequence

ATGAGGAATATGAAACGGATCGGCAATTTAAGTTCGGTGGTTATGGAGGCTGAAGAGTCTACTAATGAAGAAGAGGAAGGTGTGGATGTTGATAATGACGGGGATCTTTTGGTCGAGTATAGTGCAATAGTTCATGCATATTGCAAGGAAGGAAAGATTAAGAAGGCAAAAGAGCTTGTTGGTGAAATGTTCTTCAAGGGATGTGCTCCAGATGTTTCTCTTTGCCGGGATGGGCAACCACATGAAGCTCAGCAGTTACTCATGGAGTGCATGAACAAGGGTTGTGCTGTTAACGTAGTCAATTTCTCCACTGTCATTCATGGATTTGGTCAGAAAGATGATTTGGAAGCTGCACTGTCATTGTGGGATGATATGTACTTTTGTAACAAGGACCCTGGTTCTGTGACATACACAACATTAATTGATGCACTAGGCAAAGCTGGCCGTATAGAAGACGCCACTGAACTTTCAATGAAGATGCTGAGGCAAGGGTTGGCTCCTTCTCCTGTTACATACAGGCCTGTCATCCACCAGTATTGTCGAAAGGGTAGGGTAGAAGATTTGATGAAATTATTGAAGAACATGATTTCAAAAGGCAGATTTCAAACCCTATTTAATCTAGTTATTGAGAAACTTTGTAAATTTGGATACCTTAAAGAGGCCGACAGCCTTTTAGAGCTAGGTAATAGTCTTCCGGAATTTATTAAGAGTAGATCCGATCCAGTTTATCCAAATACCCCCGTGAGCAAATTACACAACGAAGGAACAAAGGACGAAAAGAAGATACCTGCTGCTTTAAAGGTTTCAATATCATGTTGGAATTGCATGTAA

Coding sequence (CDS)

ATGAGGAATATGAAACGGATCGGCAATTTAAGTTCGGTGGTTATGGAGGCTGAAGAGTCTACTAATGAAGAAGAGGAAGGTGTGGATGTTGATAATGACGGGGATCTTTTGGTCGAGTATAGTGCAATAGTTCATGCATATTGCAAGGAAGGAAAGATTAAGAAGGCAAAAGAGCTTGTTGGTGAAATGTTCTTCAAGGGATGTGCTCCAGATGTTTCTCTTTGCCGGGATGGGCAACCACATGAAGCTCAGCAGTTACTCATGGAGTGCATGAACAAGGGTTGTGCTGTTAACGTAGTCAATTTCTCCACTGTCATTCATGGATTTGGTCAGAAAGATGATTTGGAAGCTGCACTGTCATTGTGGGATGATATGTACTTTTGTAACAAGGACCCTGGTTCTGTGACATACACAACATTAATTGATGCACTAGGCAAAGCTGGCCGTATAGAAGACGCCACTGAACTTTCAATGAAGATGCTGAGGCAAGGGTTGGCTCCTTCTCCTGTTACATACAGGCCTGTCATCCACCAGTATTGTCGAAAGGGTAGGGTAGAAGATTTGATGAAATTATTGAAGAACATGATTTCAAAAGGCAGATTTCAAACCCTATTTAATCTAGTTATTGAGAAACTTTGTAAATTTGGATACCTTAAAGAGGCCGACAGCCTTTTAGAGCTAGGTAATAGTCTTCCGGAATTTATTAAGAGTAGATCCGATCCAGTTTATCCAAATACCCCCGTGAGCAAATTACACAACGAAGGAACAAAGGACGAAAAGAAGATACCTGCTGCTTTAAAGGTTTCAATATCATGTTGGAATTGCATGTAA

Protein sequence

MRNMKRIGNLSSVVMEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDVSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLLELGNSLPEFIKSRSDPVYPNTPVSKLHNEGTKDEKKIPAALKVSISCWNCM
Homology
[Close]
BLAST of CmoCh07G000840 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.1e-25
Identity = 68/219 (31.05%), Postives = 117/219 (53.42%), Query Frame = 0 

Query: 38  VEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLME 97
           V ++ ++ A+CKE +I +A E+  EM  KGC PDV         LC   +   A  LL +
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519

Query: 98  CMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGR 157
            +++G   N V ++T+I+ F ++ +++ A  L ++M F       +TY +LI  L +AG 
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579

Query: 158 IEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTL--FNL 217
           ++ A  L  KMLR G APS ++   +I+  CR G VE+ ++  K M+ +G    +  FN 
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639

Query: 218 VIEKLCKFGYLKEADSLLELGNSLPEFIKSRSDPVYPNT 247
           +I  LC+ G +++          L  F K +++ + P+T
Sbjct: 640 LINGLCRAGRIED---------GLTMFRKLQAEGIPPDT 669

[Close]
BLAST of CmoCh07G000840 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.1e-25
Identity = 61/199 (30.65%), Postives = 108/199 (54.27%), Query Frame = 0 

Query: 37  LVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLM 96
           ++ Y+AI+  +C+ G + +A +L  EMF KG  PD           C+ G   +A ++  
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 97  ECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAG 156
             +  GC+ NVV ++T+I G  ++ DL++A  L  +M+     P   TY ++++ L K+G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 157 RIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTL--FN 216
            IE+A +L  +    GL    VTY  ++  YC+ G ++   ++LK M+ KG   T+  FN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565

Query: 217 LVIEKLCKFGYLKEADSLL 226
           +++   C  G L++ + LL
Sbjct: 566 VLMNGFCLHGMLEDGEKLL 584

[Close]
BLAST of CmoCh07G000840 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 60/204 (29.41%), Postives = 114/204 (55.88%), Query Frame = 0 

Query: 38  VEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLME 97
           + Y+ ++H +CKE K+ +A E +  M  +GC PD+        +LC+DG+  +A ++L +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 98  CMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGR 157
             +KGC+  ++ ++TVI G  +      A+ L D+M   +  P ++TY++L+  L + G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 158 IEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKG--RFQTLFNL 217
           +++A +   +  R G+ P+ VT+  ++   C+  + +  +  L  MI++G    +T + +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 218 VIEKLCKFGYLKEADSLLELGNSL 232
           +IE L   G  KEA   LEL N L
Sbjct: 560 LIEGLAYEGMAKEA---LELLNEL 580

[Close]
BLAST of CmoCh07G000840 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24
Identity = 72/237 (30.38%), Postives = 119/237 (50.21%), Query Frame = 0 

Query: 31  DNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHE 90
           DN    ++ Y+ ++ A   EG + +A +L+ EM  +G  PD+         +C++G    
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281

Query: 91  AQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLID 150
           A +++     KGC  +V++++ ++     +   E    L   M+    DP  VTY+ LI 
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341

Query: 151 ALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQ 210
            L + G+IE+A  L   M  +GL P   +Y P+I  +CR+GR++  ++ L+ MIS G   
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401

Query: 211 TL--FNLVIEKLCKFGYLKEADSLLELGNSLPEFIKSRSDPVYPNTPVSKLHNEGTK 258
            +  +N V+  LCK G   +AD  LE+   L E   S +   Y NT  S L + G K
Sbjct: 402 DIVNYNTVLATLCKNG---KADQALEIFGKLGEVGCSPNSSSY-NTMFSALWSSGDK 454

[Close]
BLAST of CmoCh07G000840 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-23
Identity = 63/196 (32.14%), Postives = 101/196 (51.53%), Query Frame = 0 

Query: 40  YSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLMECM 99
           +++++   C     + A EL  EM  KGC PD         SLC  G+  EA  +L +  
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 100 NKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIE 159
             GCA +V+ ++T+I GF + +    A  ++D+M        SVTY TLID L K+ R+E
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522

Query: 160 DATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTL--FNLVI 219
           DA +L  +M+ +G  P   TY  ++  +CR G ++    +++ M S G    +  +  +I
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

Query: 220 EKLCKFGYLKEADSLL 226
             LCK G ++ A  LL
Sbjct: 583 SGLCKAGRVEVASKLL 598

[Close]
BLAST of CmoCh07G000840 vs. ExPASy TrEMBL
Match: A0A6J1EEV9 (pentatricopeptide repeat-containing protein At1g64583, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111433694 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.1e-84
Identity = 159/180 (88.33%), Postives = 164/180 (91.11%), Query Frame = 0 

Query: 53  IKKAKELVGEMFFKGCAP----DVSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHG 112
           +K  +E++G+ FF           SLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHG
Sbjct: 1   MKPVREVIGKGFFPNLVEINLLAQSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHG 60

Query: 113 FGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPS 172
           FGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPS
Sbjct: 61  FGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPS 120

Query: 173 PVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLLELG 229
           PVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL  G
Sbjct: 121 PVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLLGEG 180

[Close]
BLAST of CmoCh07G000840 vs. ExPASy TrEMBL
Match: A0A6J1EJG8 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433162 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.1e-73
Identity = 147/219 (67.12%), Postives = 168/219 (76.71%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPD--- 74
           +EA +  N  EE     N     + YS +VH   +EGK+ +A +LV EM  KG  P+   
Sbjct: 543 LEARKMMNMSEEEWWTPN----AITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVE 602

Query: 75  -----VSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+PHEA QLL ECMNKGCAVNVVNF+TVIHG+ QKDDLEAALSL DDMY
Sbjct: 603 INLLVQSLCRDGKPHEATQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 662

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
            CNK P +VTYTTLIDALGK GRIE+ATE +MKMLRQGL PSPVTYR VIHQYCRKGRVE
Sbjct: 663 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 722

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+KLL  M++K RFQT +NLVIEKLCKFGYL+EA+SLL
Sbjct: 723 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLL 757

[Close]
BLAST of CmoCh07G000840 vs. ExPASy TrEMBL
Match: A0A5D3CSD4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009280 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 4.3e-73
Identity = 147/219 (67.12%), Postives = 168/219 (76.71%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV-- 74
           +EA +  N  EE     N     + YS +VH   +EGK+ +A ++V EM  KG  P+   
Sbjct: 544 LEARKMMNMSEEEWWTPN----AITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 603

Query: 75  ------SLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+P+EA QLL ECMNKGCAVNVVNF+TVIHGF QKDDLEAALSL DDMY
Sbjct: 604 INLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 663

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
            CNK P +VTYTTLIDALGK  RIE+ATEL+MKMLRQGL PSPVTYR VIHQYCRKGRVE
Sbjct: 664 LCNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 723

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+KLLK M+ K RFQT +NLVIEKLCKFGYL+EA+SLL
Sbjct: 724 DLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLL 758

[Close]
BLAST of CmoCh07G000840 vs. ExPASy TrEMBL
Match: A0A1S3AYP8 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103484342 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 4.3e-73
Identity = 147/219 (67.12%), Postives = 168/219 (76.71%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV-- 74
           +EA +  N  EE     N     + YS +VH   +EGK+ +A ++V EM  KG  P+   
Sbjct: 544 LEARKMMNMSEEEWWTPN----AITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 603

Query: 75  ------SLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+P+EA QLL ECMNKGCAVNVVNF+TVIHGF QKDDLEAALSL DDMY
Sbjct: 604 INLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 663

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
            CNK P +VTYTTLIDALGK  RIE+ATEL+MKMLRQGL PSPVTYR VIHQYCRKGRVE
Sbjct: 664 LCNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 723

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+KLLK M+ K RFQT +NLVIEKLCKFGYL+EA+SLL
Sbjct: 724 DLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLL 758

[Close]
BLAST of CmoCh07G000840 vs. ExPASy TrEMBL
Match: A0A6J1IPW1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477747 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 2.1e-72
Identity = 145/219 (66.21%), Postives = 167/219 (76.26%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPD--- 74
           +EA +  N  +E     N     + YS +VH    EGK+ +A +LV EM  KG  P+   
Sbjct: 557 LEARKMMNMSDEEWWTPN----AITYSVVVHGLRWEGKLNEACDLVREMIGKGFFPNPVE 616

Query: 75  -----VSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+PHEA QLL ECMNKGCAVNVVNF+TVIHG+ QKDDLEAALSL DDMY
Sbjct: 617 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 676

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
            CNK P +VTYTTLIDALGK GRIE+ATE +MKMLRQGL PSPVTYR VIHQYCRKG+VE
Sbjct: 677 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGQVE 736

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+KLL  M++K RFQT +NLVIEKLCKFGYL+EA+SLL
Sbjct: 737 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLL 771

[Close]
BLAST of CmoCh07G000840 vs. NCBI nr
Match: KAG7026447.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378.3 bits (970), Expect = 5.9e-101
Identity = 204/280 (72.86%), Postives = 206/280 (73.57%), Query Frame = 0 

Query: 1   MRNMKRIGNLSSVVMEAEESTNEEEEGVDVDNDGDLL----------------------- 60
           MRNMKRIGNLSSVVMEAEESTNEEEEGVDVDNDGDLL                       
Sbjct: 1   MRNMKRIGNLSSVVMEAEESTNEEEEGVDVDNDGDLLLSSSWNRKFEGELRHLVRSLNPP 60

Query: 61  -VEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDVSLCR-------------------- 120
            VEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV  C                     
Sbjct: 61  QVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDVVTCTSILDREVIGKGFFPNLVEIN 120

Query: 121 --------DGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFC 180
                   DGQPHEAQQLL ECM+KGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFC
Sbjct: 121 LLAQPLRWDGQPHEAQQLLKECMSKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFC 180

Query: 181 NKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDL 229
           NKDPGS               +EDATELSMKMLRQ LAPSPVTYRPVIHQYCRKGRVEDL
Sbjct: 181 NKDPGSAKLA-----------VEDATELSMKMLRQRLAPSPVTYRPVIHQYCRKGRVEDL 240

[Close]
BLAST of CmoCh07G000840 vs. NCBI nr
Match: XP_022926617.1 (pentatricopeptide repeat-containing protein At1g64583, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-84
Identity = 159/180 (88.33%), Postives = 164/180 (91.11%), Query Frame = 0 

Query: 53  IKKAKELVGEMFFKGCAP----DVSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHG 112
           +K  +E++G+ FF           SLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHG
Sbjct: 1   MKPVREVIGKGFFPNLVEINLLAQSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHG 60

Query: 113 FGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPS 172
           FGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPS
Sbjct: 61  FGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPS 120

Query: 173 PVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLLELG 229
           PVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL  G
Sbjct: 121 PVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLLGEG 180

[Close]
BLAST of CmoCh07G000840 vs. NCBI nr
Match: XP_023543303.1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543304.1 pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543305.1 pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543306.1 pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-73
Identity = 147/219 (67.12%), Postives = 168/219 (76.71%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPD--- 74
           +EA +  N  EE     N     + YS +VH   +EGK+ +A +LV EM  KG  P+   
Sbjct: 544 LEARKMMNMSEEEWWTPN----AITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVE 603

Query: 75  -----VSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+PHEA QLL ECMNKGCAVNVVNF+TVIHG+ QKDDLEAALSL DDMY
Sbjct: 604 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 663

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
            CNK P +VTYTTLIDALGK GRIE+ATE +MKMLRQGL PSPVTYR VIHQYCRKGRVE
Sbjct: 664 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 723

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+KLL  M++K RFQT +NLVIEKLCKFGYL+EA+SLL
Sbjct: 724 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLL 758

[Close]
BLAST of CmoCh07G000840 vs. NCBI nr
Match: XP_023543308.1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023543309.1 pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-73
Identity = 147/219 (67.12%), Postives = 168/219 (76.71%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPD--- 74
           +EA +  N  EE     N     + YS +VH   +EGK+ +A +LV EM  KG  P+   
Sbjct: 544 LEARKMMNMSEEEWWTPN----AITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVE 603

Query: 75  -----VSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+PHEA QLL ECMNKGCAVNVVNF+TVIHG+ QKDDLEAALSL DDMY
Sbjct: 604 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 663

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
            CNK P +VTYTTLIDALGK GRIE+ATE +MKMLRQGL PSPVTYR VIHQYCRKGRVE
Sbjct: 664 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 723

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+KLL  M++K RFQT +NLVIEKLCKFGYL+EA+SLL
Sbjct: 724 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLL 758

[Close]
BLAST of CmoCh07G000840 vs. NCBI nr
Match: XP_023543307.1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-73
Identity = 147/219 (67.12%), Postives = 168/219 (76.71%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPD--- 74
           +EA +  N  EE     N     + YS +VH   +EGK+ +A +LV EM  KG  P+   
Sbjct: 544 LEARKMMNMSEEEWWTPN----AITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVE 603

Query: 75  -----VSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+PHEA QLL ECMNKGCAVNVVNF+TVIHG+ QKDDLEAALSL DDMY
Sbjct: 604 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 663

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
            CNK P +VTYTTLIDALGK GRIE+ATE +MKMLRQGL PSPVTYR VIHQYCRKGRVE
Sbjct: 664 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 723

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+KLL  M++K RFQT +NLVIEKLCKFGYL+EA+SLL
Sbjct: 724 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLL 758

[Close]
BLAST of CmoCh07G000840 vs. TAIR 10
Match: AT1G30290.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 225.3 bits (573), Expect = 5.9e-59
Identity = 115/219 (52.51%), Postives = 152/219 (69.41%), Query Frame = 0 

Query: 15  MEAEESTNEEEEGVDVDNDGDLLVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPD--- 74
           +EA E  N  EE     N     + YS I+H   +EGK+ +A ++V EM  KG  P    
Sbjct: 506 LEAREMMNMSEEHWWSPNS----ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVE 565

Query: 75  -----VSLCRDGQPHEAQQLLMECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMY 134
                 SLCRDG+ HEA++ + EC+NKGCA+NVVNF+TVIHGF Q D+L+AALS+ DDMY
Sbjct: 566 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 625

Query: 135 FCNKDPGSVTYTTLIDALGKAGRIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVE 194
             NK     TYTTL+D LGK GRI +ATEL  KML +G+ P+PVTYR VIH+YC+ G+V+
Sbjct: 626 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 685

Query: 195 DLMKLLKNMISKGRFQTLFNLVIEKLCKFGYLKEADSLL 226
           DL+ +L+ MIS+ + +T++N VIEKLC  G L+EAD+LL
Sbjct: 686 DLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLL 720

[Close]
BLAST of CmoCh07G000840 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-26
Identity = 61/199 (30.65%), Postives = 108/199 (54.27%), Query Frame = 0 

Query: 37  LVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLM 96
           ++ Y+AI+  +C+ G + +A +L  EMF KG  PD           C+ G   +A ++  
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 97  ECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAG 156
             +  GC+ NVV ++T+I G  ++ DL++A  L  +M+     P   TY ++++ L K+G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 157 RIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTL--FN 216
            IE+A +L  +    GL    VTY  ++  YC+ G ++   ++LK M+ KG   T+  FN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565

Query: 217 LVIEKLCKFGYLKEADSLL 226
           +++   C  G L++ + LL
Sbjct: 566 VLMNGFCLHGMLEDGEKLL 584

[Close]
BLAST of CmoCh07G000840 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-26
Identity = 61/199 (30.65%), Postives = 108/199 (54.27%), Query Frame = 0 

Query: 37  LVEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLM 96
           ++ Y+AI+  +C+ G + +A +L  EMF KG  PD           C+ G   +A ++  
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 97  ECMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAG 156
             +  GC+ NVV ++T+I G  ++ DL++A  L  +M+     P   TY ++++ L K+G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 157 RIEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTL--FN 216
            IE+A +L  +    GL    VTY  ++  YC+ G ++   ++LK M+ KG   T+  FN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565

Query: 217 LVIEKLCKFGYLKEADSLL 226
           +++   C  G L++ + LL
Sbjct: 566 VLMNGFCLHGMLEDGEKLL 584

[Close]
BLAST of CmoCh07G000840 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-26
Identity = 68/219 (31.05%), Postives = 117/219 (53.42%), Query Frame = 0 

Query: 38  VEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLME 97
           V ++ ++ A+CKE +I +A E+  EM  KGC PDV         LC   +   A  LL +
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519

Query: 98  CMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGR 157
            +++G   N V ++T+I+ F ++ +++ A  L ++M F       +TY +LI  L +AG 
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579

Query: 158 IEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKGRFQTL--FNL 217
           ++ A  L  KMLR G APS ++   +I+  CR G VE+ ++  K M+ +G    +  FN 
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639

Query: 218 VIEKLCKFGYLKEADSLLELGNSLPEFIKSRSDPVYPNT 247
           +I  LC+ G +++          L  F K +++ + P+T
Sbjct: 640 LINGLCRAGRIED---------GLTMFRKLQAEGIPPDT 669

[Close]
BLAST of CmoCh07G000840 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 60/204 (29.41%), Postives = 114/204 (55.88%), Query Frame = 0 

Query: 38  VEYSAIVHAYCKEGKIKKAKELVGEMFFKGCAPDV--------SLCRDGQPHEAQQLLME 97
           + Y+ ++H +CKE K+ +A E +  M  +GC PD+        +LC+DG+  +A ++L +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 98  CMNKGCAVNVVNFSTVIHGFGQKDDLEAALSLWDDMYFCNKDPGSVTYTTLIDALGKAGR 157
             +KGC+  ++ ++TVI G  +      A+ L D+M   +  P ++TY++L+  L + G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 158 IEDATELSMKMLRQGLAPSPVTYRPVIHQYCRKGRVEDLMKLLKNMISKG--RFQTLFNL 217
           +++A +   +  R G+ P+ VT+  ++   C+  + +  +  L  MI++G    +T + +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 218 VIEKLCKFGYLKEADSLLELGNSL 232
           +IE L   G  KEA   LEL N L
Sbjct: 560 LIEGLAYEGMAKEA---LELLNEL 580

The following BLAST results are available for this feature:
BLAST of CmoCh07G000840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FMF67.1e-2531.05Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q0WVK77.1e-2530.65Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q3EDF81.6e-2429.41Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR002.7e-2430.38Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
Q9LFF13.0e-2332.14Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
BLAST of CmoCh07G000840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EEV91.1e-8488.33pentatricopeptide repeat-containing protein At1g64583, mitochondrial-like OS=Cuc... [more]
A0A6J1EJG81.1e-7367.12pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like OS=Cuc... [more]
A0A5D3CSD44.3e-7367.12Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AYP84.3e-7367.12pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1IPW12.1e-7266.21pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... [more]
BLAST of CmoCh07G000840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026447.15.9e-10172.86Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022926617.12.2e-8488.33pentatricopeptide repeat-containing protein At1g64583, mitochondrial-like [Cucur... [more]
XP_023543303.11.8e-7367.12pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... [more]
XP_023543308.11.8e-7367.12pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... [more]
XP_023543307.11.8e-7367.12pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... [more]
BLAST of CmoCh07G000840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G30290.15.9e-5952.51Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.15.0e-2630.65Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.25.0e-2630.65Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G64320.15.0e-2631.05Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09900.11.1e-2529.41Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 40..63
e-value: 2.3E-6
score: 27.2
coord: 93..125
e-value: 1.2E-5
score: 24.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 205..226
e-value: 0.15
score: 12.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 132..176
e-value: 1.1E-10
score: 41.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 40..72
e-value: 3.1E-8
score: 31.3
coord: 102..126
e-value: 2.3E-4
score: 19.1
coord: 170..199
e-value: 1.9E-5
score: 22.5
coord: 135..168
e-value: 4.4E-8
score: 30.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 133..167
score: 11.969797
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 98..132
score: 8.900633
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 36..70
score: 10.972319
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..202
score: 10.128299
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..73
e-value: 1.9E-7
score: 32.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 74..240
e-value: 8.3E-32
score: 112.8
NoneNo IPR availablePANTHERPTHR46128:SF175SUBFAMILY NOT NAMEDcoord: 25..73
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 84..225
NoneNo IPR availablePANTHERPTHR46128:SF175SUBFAMILY NOT NAMEDcoord: 84..225
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 25..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G000840.1CmoCh07G000840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding