CmoCh07G000750 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh07G000750
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr07: 472276 .. 474096 (+)
RNA-Seq ExpressionCmoCh07G000750
SyntenyCmoCh07G000750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATGTCGCCATTAATATTTCCCCTCGACCCCCTCAGTATTTCACCGACGCGCGCCGTCCGGGTTTCTTGTTACCGATTCATCTTCTTAATGTTATGCAGGTGATTGTTTTCTCTCTCTTTTTCAAATGTTAGTTATAATCCTGTGAATTTGTTGAAATTTTGTTCGTAACTAGCCATTGGCTCCAATTTCAAAGACATCGAGGTTTACGTTTTTATTTCCGATGATTGGAGGATAATAAATTTTTTATGGTCGTCGTTATTTCTAGGTTGAAAAGTGGTTTTGAATCCGTAATTATTTAAGAAACAGAAAAGGATGCGAAGGGAAATGATGCTTTTATGTTTTGGATGATGAAGATTACGTTTAGCAGGTAACGGATGATTGTTTTGTGTTCTTTTTTTTTCTATAGCTGGTCAATGAATGTTCTTAGCTTACTTGTAAGTCCGTTGCCATACACTTCTCAGATCTCTGCAGAAATGGTATGTTTTACTTGTATTTCTGTCAATCTTGAGTTTTAGTTATACTCATGCAAGCAGTTGGAAGCGTTTTATGGCCAAGATAGCTACGGGGTAATGCTAGTTCAATTTATGTATGCGTTTTGAGTTGTATAAATTCAGCTGATATTGATGTCTTATGAAGGGATTCATTCCCTTTAAATTGCAGTCATTAGCCTGTTTCAGCTGCAAGTTCATTCCAACTAGGTTGTCTAGTCTGCCTTCGTTAATCAATTTCTGTGCAGTCTTTGGTTTTGTGCATTTGATTTGTAGTCCTACTTCATATACTATAATTCACTGTGATATCAGAGCTTCACGTTGAGAAGTTTGTCTCGTGAGGTTTAAAAACAGTGGCATATCAATTAGAGCCTCATGGAACCCTTTTGATTACGAGATGATCACTTGGAAGAATTTTGAAAGTCGGTGGCTCTACATATACAGACACTGCTCTCTTATTGTTGTAAACACCTTGGCAATCATAAAGTTGTAAAAGATCCCTTATCTTCATAGGACCTTACTTGAACAAGATCTGTTCTTTAGGCTGTATCATTGTGTCCTTGAGTTCGAAGTTTCCTTGATCTTCCTCCTCCAGCCAAATTATCAAAAGCGCCTAAGTTTGTGCTTGTGGCTGAGATTGCTGAAATCTCGGTACCTCAACCAGGTCTTTACACCACTATTATGCTTTCTTCTGTTTGTTTGCTTTGAAATGTCAAATTCAAAAATCTATTTTCTTGTTTATCGTTCTGATTTCTGAATCACACAGAACATTTACCGCAGTAATTGCATTAACTGAATTTTATCCCGCCCCTTTTTCAAACTTAATATTCAACTACTACGTTCATTCACTTCATTATTTTCCTTCCAGATGCCAATGGAATCTCAGGAGCCATTAGATTTGGTTCGCTGTTCGTTGTTCGTTGTTCGGCCGATGATCGCGCCAAAGCTCTGATGGGTTTTCGGTCTATTCCACTCGAGGTTCATGCAATGGCTACGGGATCTGAACATATGCAGCTTGTGTTTCTGATGCCATGTAAGTCGAAAGCTCGCTTTGAACTACAGAGAGCTCGTTTTGAAGATCTTCAAGTCTCTTATGAAGAATTGATGTAAAGCAGACGCAGCCATACACAGGCTCATGCAGCCAAAGCCTCTGCCTCATAGACCAAAGAGTCGACAGCTTCATTGCGCACATCATAGCTCAAAAATGCACTTCTGTGAACAATTTGGAATTTCTGAAGCTGGTCTGCTGGAAAATGTGGCGCAAAAATGCAATCTGGAAGACACTTTCTTCTTAGAAGTTTACAGGCTGCACATGGTGAGCCGTAATTAA

mRNA sequence

TTGATGTCGCCATTAATATTTCCCCTCGACCCCCTCAGTATTTCACCGACGCGCGCCGTCCGGGTTTCTTGTTACCGATTCATCTTCTTAATGTTATGCAGGTTGAAAAGTGATTACGTTTAGCAGATGCCAATGGAATCTCAGGAGCCATTAGATTTGGTTCGCTGTTCGTTGTTCGTTGTTCGGCCGATGATCGCGCCAAAGCTCTGATGGGTTTTCGGTCTATTCCACTCGAGGTTCATGCAATGGCTACGGGATCTGAACATATGCAGCTTGTGTTTCTGATGCCATACGCAGCCATACACAGGCTCATGCAGCCAAAGCCTCTGCCTCATAGACCAAAGAGTCGACAGCTTCATTGCGCACATCATAGCTCAAAAATGCACTTCTGTGAACAATTTGGAATTTCTGAAGCTGGTCTGCTGGAAAATGTGGCGCAAAAATGCAATCTGGAAGACACTTTCTTCTTAGAAGTTTACAGGCTGCACATGGTGAGCCGTAATTAA

Coding sequence (CDS)

ATGGGTTTTCGGTCTATTCCACTCGAGGTTCATGCAATGGCTACGGGATCTGAACATATGCAGCTTGTGTTTCTGATGCCATACGCAGCCATACACAGGCTCATGCAGCCAAAGCCTCTGCCTCATAGACCAAAGAGTCGACAGCTTCATTGCGCACATCATAGCTCAAAAATGCACTTCTGTGAACAATTTGGAATTTCTGAAGCTGGTCTGCTGGAAAATGTGGCGCAAAAATGCAATCTGGAAGACACTTTCTTCTTAGAAGTTTACAGGCTGCACATGGTGAGCCGTAATTAA

Protein sequence

MGFRSIPLEVHAMATGSEHMQLVFLMPYAAIHRLMQPKPLPHRPKSRQLHCAHHSSKMHFCEQFGISEAGLLENVAQKCNLEDTFFLEVYRLHMVSRN
Homology
[Close]
BLAST of CmoCh07G000750 vs. NCBI nr
Match: KAG7026440.1 (hypothetical protein SDJN02_10440 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 58.2 bits (139), Expect = 4.8e-05
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 1  MGFRSIPLEVHAMATGSEHMQLVFLMP 28
          MGFRSIPLEVHAMATGSEHMQLVFLMP
Sbjct: 51 MGFRSIPLEVHAMATGSEHMQLVFLMP 77

[Close]
BLAST of CmoCh07G000750 vs. NCBI nr
Match: KAG6594434.1 (hypothetical protein SDJN03_10987, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.2 bits (139), Expect = 4.8e-05
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 1  MGFRSIPLEVHAMATGSEHMQLVFLMP 28
          MGFRSIPLEVHAMATGSEHMQLVFLMP
Sbjct: 71 MGFRSIPLEVHAMATGSEHMQLVFLMP 97

The following BLAST results are available for this feature:
BLAST of CmoCh07G000750 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G000750 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh07G000750 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026440.14.8e-05100.00hypothetical protein SDJN02_10440 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6594434.14.8e-05100.00hypothetical protein SDJN03_10987, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmoCh07G000750 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G000750.1CmoCh07G000750.1mRNA