CmoCh06G017370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G017370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	SNARE associated Golgi protein family
Location	Cmo_Chr06: 11909165 .. 11912739 (-)
RNA-Seq Expression	CmoCh06G017370
Synteny	CmoCh06G017370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAGTCTCCGCCCTGAACGGTTTTTAACCGGAATCAAATCTCCAGGAAGATGGGATCTGGGTGGGGACGGTGGTTCAAATTAGCCGCCGTAGTGGCGGTGCTGGCGATTTTGAGAGAGTTAGGGAAGCGATACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTGTTCGACCAATGGTCCGATCGATTGGGGATATGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCCTACGCCGTATTCTTTGAGGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCCGCCGTGATTTGCGTTTTCTGTGCCAAGGTGCTTGGGGCTTCCCTTTCCTTCTGGATCGGCAGGTTTGTTCTAACATTTCCTTTTTCTTGTCTGATTTCCTCTTATTCAATACTGAGATTATGCAAGGCTTCCGACGTTTTGTGATGTGAAATTGTGTGTTCATGGTATGGAATTAAGTTCGGAATTTTGTTGCTGTAGTTTTAGATATGTTTGTTGATTGGGGATTTTATATGTCTTATCTTACAATTTTACGTTGGATTCCCTGAAATGGATTATTTTTCCCTGATGCTGTATTTGAGGATAGAAGTTGATTGGCGTTTTTAGTCTATATAGAAAGTGAAAGGATTGAAGTTTTGTTGAATTTCTTGTGTTCCACATTGTTGAGAGAATAGCTGGTGCTTACTATTTGTTGTAAGCTGTTCTGTTTGGTAAATAATGAAGGTAGAAAGCTTGTGTATGATTCGGGCTGTGGCGTGGTAGGGGAAATCATATGCCACGACTTTATAGTTTTTATATTATTTTGAAACAGAAACAGAAACTTTTCATTAGTATAGTTTTTTTTTATGAGAATTCTACTCTGTATTGACTAAACAAACTGTACAAAAGTGGATAAAGTGCACCAATTAGAGAATAAGTATATAACTAGGCCCCTCAAGTCACATCTTTAAACACCCTTTAATTTCTTTAAAACCACAACCTCCAAGGTAACTCATGATAGCATTATACAAAGAATCTTTGCTTGATCTAGGAAGGGAAGACTCACCCTAATACAAACCACATTATCCAACCTCCCCACTTAATGCATTTCTCTATTCGAAATGCTACAAAAAGTGACTTCGGATATAGAAAGATTATTTAGAAACTATTTGTGGAAAGATGGCTGACACCTTGTTCGATGAAATTTTATGAACCTCTCAATAGAAAAGGGAGGCCTCGGTCTTTTCTCGATAAAGAAGAGGAACAACACTCTCCTCGCAAAATGGATATTGAGATATCATCATCAAGAAAATGTCTTACGGAGAAATCTTATAAAGGCTAAATATACTCATATATCAGTCAAAAATCAACCCTTCCATCATCTGCAAAAGGGCCTTGGAAGTACGTAAAGGAACATTAAAACCTCATTGGTGAGTGATGAGGAAGCACATCATTTTGGACCGACCCATGGATTGAAAACCCCATGCTAGTCTTGCCGTATCCACTTTTGTACAGGCTCTCTCATAGCAAAAAAGCCACGATCAAAGAAACATGGATTGTTGTTAACGAATTTTGGGACTTGAACTGTGGTAAGAATTTAAAGGATATGAAGCAACGGAATGGGCCGAATTAAGCCTTGAACTTGCTCCAGTGGTATTGTCAAACGAAGCAGACTTACTCACTTAGCTCCCTAGCGCTGACGGGGTCTTCTCTACAAAATCCTTGATGATGGACATGGGGGAAAGTAGAAGCAATAAATCTCACGTTAGCAAAGACAATACGAAGGACATCACCCTAAATAGGTGAAAATTTTCCTTTGGGAAATAGCACATAAAGCCCAATTAGCACAAGCAAAAATCTTCAAAAAAGAATGTCTTACATTTACTCTTCCTCCATATTGGTGTCCATTAAGGAAAGAAAATGGATCACAAAGCCACTTATTTATGCAATGCACAAACGCTCAGAATTTTTGGACAACGATTCTTAACGTATTCGGATGACATCTCACATTTCCTAGGGAGGTAAAGGATCTATTGGACATGGCCTTAATGTACCACTCATCCAAGAATGCAAAAGCCCTATTATGGAAAAACCTTTCTTTTGGAACATGTGGAAAGAAAAAAACACAAACTTATACAGAACTCTTCGACAATATTGTTTACCAAACTATATCTTGGTGTAAGCTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTTTACTACCTCCCTCATTTTAGAGGAGTACCCATGGAGGTTAAATTGATTAAATAACTTCCCCCAACTTGTAGCTTCAAAGGAGCCATGAAAGTAGAGGCGAGTCTAGTCATCTAATGATATTTTATGAAAGGAGCACAAACTTATGGACAAAATATAGTGAGGAAACATTTTCCACTCTTTGTTGCTAGTGTCCAACCGATCTTGGAATTTTAGACTTCCAAATAGCCTTGTCCAGCAGCTACCAAGGATTCGTTTCCTTTGAAAGAGACCTAAAAACACGGATTTTAGAGGCAGGGGAACCACTGATCTTTGAAAAGACAGGACTCCCTCCATTGATGAGCTTTTCTGTGGCGAGCTTCCTTGAATGGATGCTGAAGAGCAGTGAATTCCTTACCTGCAAGTTGGTGCTTATATCCGACCCACCTTGAGGGGAAAAAAAGGCACTCTTTTTCAAGTTTAGCAGAAAACAGAGGAATTTTATGATGTGATGAAAAAATATGAGTTGGAAGGCAGTTTGAGAAGTGCATTGCTTTATATACTTAATTTATAAGTTGTTGCCCCATCTAGAAACATGTCCTGAAATGTTTGAAGTGTCTGGTGTTATGAATTTCTATTATCCAACATCTCAATCCAAGGTCATGTTTTGTTCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATACTTCCATCTTCTTTGTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGATTTTCACCAATTCCCTCATACGTTATAAATTATGCTCTTGCAGCAACCAAAGTGGGGTTCTTTTTAGATTTTCTGGTGCCAACTGTGATGGGATGCTTGCCAATGATACTTCAGAATACGTCAATTGGCAGTCTCGCTGGTGCTGCAGTTGCTTCAGCCTCTGGGTCTCAGAAATCTCAGATATGGTCGTACATTTTTCCTGTACTTGGTATTGGATCCAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTACTGGACTCGCAGTGCCTGAAAGTTCCTCTACTGTTGACCCATCTAAAACCAAAGTACTGTAGTCATACCTTTTCTTTTCTTTCTTAAGAGATTATTAGATTGATGCCACATTTTCGGCTTTTGATTTATGAGTCCCGGAGGTTTTATTATAATCTTCATCAGTGATACAACACAAGACATAATCTCCAAGTTGAGAGGGAGCAAAGAAAAATGTTTAGTGCAAATCTCTCGTCCTTTCGACCTTTCTTTCTACCTCTGTTTCTTTTCCACTCGTATTGTTGTTTAGAGTGCCGAGGAAAGGGAACTAAGCATGAACAAATC

mRNA sequence

TGGTAGTCTCCGCCCTGAACGGTTTTTAACCGGAATCAAATCTCCAGGAAGATGGGATCTGGGTGGGGACGGTGGTTCAAATTAGCCGCCGTAGTGGCGGTGCTGGCGATTTTGAGAGAGTTAGGGAAGCGATACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTGTTCGACCAATGGTCCGATCGATTGGGGATATGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCCTACGCCGTATTCTTTGAGGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCCGCCGTGATTTGCGTTTTCTGTGCCAAGGTGCTTGGGGCTTCCCTTTCCTTCTGGATCGGCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATACTTCCATCTTCTTTGTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGATTTTCACCAATTCCCTCATACGTTATAAATTATGCTCTTGCAGCAACCAAAGTGGGGTTCTTTTTAGATTTTCTGGTGCCAACTGTGATGGGATGCTTGCCAATGATACTTCAGAATACGTCAATTGGCAGTCTCGCTGGTGCTGCAGTTGCTTCAGCCTCTGGGTCTCAGAAATCTCAGATATGGTCGTACATTTTTCCTGTACTTGGTATTGGATCCAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTACTGGACTCGCAGTGCCTGAAAGTTCCTCTACTGTTGACCCATCTAAAACCAAAGTACTGTAGTCATACCTTTTCTTTTCTTTCTTAAGAGATTATTAGATTGATGCCACATTTTCGGCTTTTGATTTATGAGTCCCGGAGGTTTTATTATAATCTTCATCAGTGATACAACACAAGACATAATCTCCAAGTTGAGAGGGAGCAAAGAAAAATGTTTAGTGCAAATCTCTCGTCCTTTCGACCTTTCTTTCTACCTCTGTTTCTTTTCCACTCGTATTGTTGTTTAGAGTGCCGAGGAAAGGGAACTAAGCATGAACAAATC

Coding sequence (CDS)

ATGGGATCTGGGTGGGGACGGTGGTTCAAATTAGCCGCCGTAGTGGCGGTGCTGGCGATTTTGAGAGAGTTAGGGAAGCGATACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTGTTCGACCAATGGTCCGATCGATTGGGGATATGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCCTACGCCGTATTCTTTGAGGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCCGCCGTGATTTGCGTTTTCTGTGCCAAGGTGCTTGGGGCTTCCCTTTCCTTCTGGATCGGCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATACTTCCATCTTCTTTGTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGATTTTCACCAATTCCCTCATACGTTATAAATTATGCTCTTGCAGCAACCAAAGTGGGGTTCTTTTTAGATTTTCTGGTGCCAACTGTGATGGGATGCTTGCCAATGATACTTCAGAATACGTCAATTGGCAGTCTCGCTGGTGCTGCAGTTGCTTCAGCCTCTGGGTCTCAGAAATCTCAGATATGGTCGTACATTTTTCCTGTACTTGGTATTGGATCCAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTACTGGACTCGCAGTGCCTGAAAGTTCCTCTACTGTTGACCCATCTAAAACCAAAGTACTGTAG

Protein sequence

MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTVDPSKTKVL

Homology

[Close]

BLAST of CmoCh06G017370 vs. ExPASy TrEMBL
Match: A0A6J1I539 (uncharacterized protein LOC111470758 OS=Cucurbita maxima OX=3661 GN=LOC111470758 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 7.6e-138
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH
Sbjct: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM
Sbjct: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240

Query: 241 TVDPSKTKVL 251
           TVDPSKTKVL
Sbjct: 241 TVDPSKTKVL 250

[Close]

BLAST of CmoCh06G017370 vs. ExPASy TrEMBL
Match: A0A6J1F2J1 (uncharacterized protein LOC111439086 OS=Cucurbita moschata OX=3662 GN=LOC111439086 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 7.6e-138
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH
Sbjct: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM
Sbjct: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240

Query: 241 TVDPSKTKVL 251
           TVDPSKTKVL
Sbjct: 241 TVDPSKTKVL 250

[Close]

BLAST of CmoCh06G017370 vs. ExPASy TrEMBL
Match: A0A6J1J5V4 (uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.7e-124
Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MG+GWGRW KLAAVVAV+AILRELGK YGWEIDREAALKVF  WSDRLG+WAMPAYVGIH
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGHWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYS+GL + ESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 TVDPSKTK 249
           +V+PSKTK
Sbjct: 241 SVEPSKTK 248

[Close]

BLAST of CmoCh06G017370 vs. ExPASy TrEMBL
Match: A0A0A0LFP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122
Identity = 226/254 (88.98%), Postives = 238/254 (93.70%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MG+ WGRW KLAA+VAV+AILR+LGK YGWE DR+AALKVF QWSDRLG+WAMPAYVGIH
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYS+GL V  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 T------VDPSKTK 249
           +      VDPSKTK
Sbjct: 241 SDEGNDNVDPSKTK 254

[Close]

BLAST of CmoCh06G017370 vs. ExPASy TrEMBL
Match: A0A6J1F1R5 (uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC111441406 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.0e-122
Identity = 227/254 (89.37%), Postives = 239/254 (94.09%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MG+GWGRW KLAAVVAV+AILRELGK YGWEIDREAALKVF QWSDRLG+WAMPAYVG+H
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYS+GL + ESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 ------TVDPSKTK 249
                 +V+PSK K
Sbjct: 241 SVERSDSVEPSKAK 254

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: XP_022932570.1 (uncharacterized protein LOC111439086 [Cucurbita moschata] >XP_022972126.1 uncharacterized protein LOC111470758 [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH
Sbjct: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM
Sbjct: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240

Query: 241 TVDPSKTKVL 251
           TVDPSKTKVL
Sbjct: 241 TVDPSKTKVL 250

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: KAG6597725.1 (hypothetical protein SDJN03_10905, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029172.1 hypothetical protein SDJN02_10357 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.0 bits (1281), Expect = 4.6e-137
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH
Sbjct: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM
Sbjct: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240

Query: 241 TVDPSKTKVL 251
           T DPSKTKVL
Sbjct: 241 TADPSKTKVL 250

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: XP_023540911.1 (uncharacterized protein LOC111801151 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.9 bits (1278), Expect = 1.0e-136
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MGSGWGRWFKLAAVVAVLAILRELGK YGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH
Sbjct: 1   MGSGWGRWFKLAAVVAVLAILRELGKLYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM
Sbjct: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240

Query: 241 TVDPSKTKVL 251
           TVDPSKTKVL
Sbjct: 241 TVDPSKTKVL 250

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: XP_023521094.1 (uncharacterized protein LOC111784712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.4 bits (1178), Expect = 4.0e-125
Identity = 229/248 (92.34%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MG+GWGRWFKLAAVVAV+AILRELGK YGWEIDREAALKVF QWSDRLG+WAMPAYVGIH
Sbjct: 1   MGAGWGRWFKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYS+GL + ESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 TVDPSKTK 249
           +V+PSK K
Sbjct: 241 SVEPSKAK 248

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: XP_022982788.1 (uncharacterized protein LOC111481545 [Cucurbita maxima])

HSP 1 Score: 455.3 bits (1170), Expect = 3.4e-124
Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 0


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MG+GWGRW KLAAVVAV+AILRELGK YGWEIDREAALKVF  WSDRLG+WAMPAYVGIH
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGHWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYS+GL + ESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 TVDPSKTK 249
           +V+PSKTK
Sbjct: 241 SVEPSKTK 248

[Close]

BLAST of CmoCh06G017370 vs. TAIR 10
Match: AT1G44960.1 (SNARE associated Golgi protein family )

HSP 1 Score: 321.2 bits (822), Expect = 7.2e-88
Identity = 159/240 (66.25%), Postives = 194/240 (80.83%), Query Frame = 0


Query: 7   RWFKLAAVVAVLAIL-RELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLA 66
           +W  +AA VA++AI+ R+   +YGW  ++EAAL+   +WSDRLGIWA+P YV +HT TLA
Sbjct: 3   KWLAIAATVAIIAIIVRQGTTQYGW--NKEAALEKLKEWSDRLGIWAIPTYVAVHTITLA 62

Query: 67  LCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKY 126
           LCLP+AVFFEA AS+LFGF PA++CVF AKVL AS SFWIGR +F++S+ A  WA  NKY
Sbjct: 63  LCLPHAVFFEAGASMLFGFLPALLCVFSAKVLAASFSFWIGRFVFKSSTRATGWAHSNKY 122

Query: 127 FHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNT 186
           F++L RGVE+DGWKFVLLARFSPIPSYVINYALAAT+V F  DFL PTV+GCLPMILQN 
Sbjct: 123 FNILSRGVERDGWKFVLLARFSPIPSYVINYALAATEVRFVADFLFPTVIGCLPMILQNA 182

Query: 187 SIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTVDPS 246
           S+GSLAG AVAS +G QKSQ+W Y+FPVLGI SS+LIS RIKKYS G+    S ++ + S
Sbjct: 183 SVGSLAGMAVASVAGKQKSQVWGYVFPVLGILSSVLISLRIKKYSAGITEASSDTSANNS 240

[Close]

BLAST of CmoCh06G017370 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family )

HSP 1 Score: 45.1 bits (105), Expect = 9.9e-05
Identity = 46/190 (24.21%), Postives = 83/190 (43.68%), Query Frame = 0


Query: 11  LAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLALCLPY 70
           LA V+ +  +    G  Y +       L  F  + +  G      ++ ++     L +P 
Sbjct: 111 LAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFIAVYAGLEILAIP- 170

Query: 71  AVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYFHLLC 130
           A+    +A LLFG     I V  +  + AS++F I R   R     ++  + NK F  + 
Sbjct: 171 ALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFAR--ERILKLVEDNKKFLAID 230

Query: 131 RGVEQDGWKFVLLARFSP-IPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNTSIGS 190
           + + ++G++ V L R SP +P  + NY    T V  F+ +++ + +G LP      S G+
Sbjct: 231 KAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVK-FVPYVLGSWLGMLPGSWAYVSAGA 290

Query: 191 LAGAAVASAS 200
              A +   S
Sbjct: 291 FGRAIIQEES 296

The following BLAST results are available for this feature:

BLAST of CmoCh06G017370 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G017370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I539	7.6e-138	100.00	uncharacterized protein LOC111470758 OS=Cucurbita maxima OX=3661 GN=LOC111470758...	[more]
A0A6J1F2J1	7.6e-138	100.00	uncharacterized protein LOC111439086 OS=Cucurbita moschata OX=3662 GN=LOC1114390...	[more]
A0A6J1J5V4	1.7e-124	91.94	uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545...	[more]
A0A0A0LFP4	1.2e-122	88.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1	[more]
A0A6J1F1R5	2.0e-122	89.37	uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]

BLAST of CmoCh06G017370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932570.1	1.6e-137	100.00	uncharacterized protein LOC111439086 [Cucurbita moschata] >XP_022972126.1 unchar...	[more]
KAG6597725.1	4.6e-137	99.60	hypothetical protein SDJN03_10905, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023540911.1	1.0e-136	99.60	uncharacterized protein LOC111801151 [Cucurbita pepo subsp. pepo]	[more]
XP_023521094.1	4.0e-125	92.34	uncharacterized protein LOC111784712 [Cucurbita pepo subsp. pepo]	[more]
XP_022982788.1	3.4e-124	91.94	uncharacterized protein LOC111481545 [Cucurbita maxima]	[more]

BLAST of CmoCh06G017370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44960.1	7.2e-88	66.25	SNARE associated Golgi protein family	[more]
AT1G22850.1	9.9e-05	24.21	SNARE associated Golgi protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 68..189 e-value: 1.3E-20 score: 74.0
None	No IPR available	PANTHER	PTHR47699	SNARE ASSOCIATED GOLGI PROTEIN FAMILY	coord: 6..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G017370.1	CmoCh06G017370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane