Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGTGATTATGATGATCTACTTCTCCAATCCCATGGACTCATGAATATGATCACTCAAGCACCACAGCCCCTACAACCAACAACCCTAATCTTTTTCTTAATGGCTCTCTCTTCTTCTTTTCTCCCTTCATACAAACCCCTACTCTTCCATGGCCCCCAAAATTAGCCACCTTTCTCCACCTATTTCCCTCCCTCCATGGCGCCCTCCCCTCACCAAAACATCCCCTTACTTCTCCAACCCCTCGCCTCTCCGGGTCGCCGCCCATGACAATGCTTCCTGCCCATACCCCTCTCTCCCAACTCCGTCCATCCGCCGGCTGCGGCGCCGACCATCTCATGAATGCTGCTCCTCCGCCTATTTCTGAAAATTATTACTATTACTATTCTCATCCTTATCTAATTCCTCTTCCTCCTCCCATGGCGGATGATGACTCCACAACTAACAGTTTTAATGAAGAACCCCCTTTTAATAGAGATGATGGGTGGCTTCAATTAAGTATCGGCCGCGGGAGACCTCCAACAACCTCCAATTTGGTCGAGCTAGATCTATTACCCGGCGGAGGAGGTGACAACCCCGCCGCCACCGCCACCGCCACCGCCACCACCAGCCGGGATTTCTTAACCCCTGAAGCTGCTACGACAGCTCGGTCGGAGACGGGAATGCAGTTGTTTTTTGGAACTCCTACCTCTTCCAACTTTGTACAGCAAGAGATCAATTGGGCATTCAGGCCGATATCGGCTGCGTCGTCGTCTTCTTCCTTTCTACCGGTTGGCGGTCGGCGGAGTTCTTACTTAGGTGGGCCGTTTATCCAATTCCAAAGCTCCGGGGTTCAGGCCGGCGGTGCCGGGCCGAGCTCCGACGTCAGAATCATAAATCCTCCCCGGCGGCCCCATTCTGGTATTTGGTTTACATTAAAAGCCTTAGAAAATCAGTAAGTAAAAAAAATAAAAATAAAAAACAAAAAGATTTCTCCTTAATCTTGTTCTTAATTACATATCATAATCAAATTGTTCTCTAAGCCTTTGAATTTCTGGGTTTTGTTAATGCAGATCAAAACAACCATTCTTGCCTCAGATTTCAAAAAATTATCTCAGAATCAAGTGA
mRNA sequence
GGTGTGATTATGATGATCTACTTCTCCAATCCCATGGACTCATGAATATGATCACTCAAGCACCACAGCCCCTACAACCAACAACCCTAATCTTTTTCTTAATGGCTCTCTCTTCTTCTTTTCTCCCTTCATACAAACCCCTACTCTTCCATGGCCCCCAAAATTAGCCACCTTTCTCCACCTATTTCCCTCCCTCCATGGCGCCCTCCCCTCACCAAAACATCCCCTTACTTCTCCAACCCCTCGCCTCTCCGGGTCGCCGCCCATGACAATGCTTCCTGCCCATACCCCTCTCTCCCAACTCCGTCCATCCGCCGGCTGCGGCGCCGACCATCTCATGAATGCTGCTCCTCCGCCTATTTCTGAAAATTATTACTATTACTATTCTCATCCTTATCTAATTCCTCTTCCTCCTCCCATGGCGGATGATGACTCCACAACTAACAGTTTTAATGAAGAACCCCCTTTTAATAGAGATGATGGGTGGCTTCAATTAAGTATCGGCCGCGGGAGACCTCCAACAACCTCCAATTTGGTCGAGCTAGATCTATTACCCGGCGGAGGAGGTGACAACCCCGCCGCCACCGCCACCGCCACCGCCACCACCAGCCGGGATTTCTTAACCCCTGAAGCTGCTACGACAGCTCGGTCGGAGACGGGAATGCAGTTGTTTTTTGGAACTCCTACCTCTTCCAACTTTGTACAGCAAGAGATCAATTGGGCATTCAGGCCGATATCGGCTGCGTCGTCGTCTTCTTCCTTTCTACCGGTTGGCGGTCGGCGGAGTTCTTACTTAGGTGGGCCGTTTATCCAATTCCAAAGCTCCGGGGTTCAGGCCGGCGGTGCCGGGCCGAGCTCCGACGTCAGAATCATAAATCCTCCCCGGCGGCCCCATTCTGGTATTTGGTTTACATTAAAAGCCTTAGAAAATCAATCAAAACAACCATTCTTGCCTCAGATTTCAAAAAATTATCTCAGAATCAAGTGA
Coding sequence (CDS)
ATGACAATGCTTCCTGCCCATACCCCTCTCTCCCAACTCCGTCCATCCGCCGGCTGCGGCGCCGACCATCTCATGAATGCTGCTCCTCCGCCTATTTCTGAAAATTATTACTATTACTATTCTCATCCTTATCTAATTCCTCTTCCTCCTCCCATGGCGGATGATGACTCCACAACTAACAGTTTTAATGAAGAACCCCCTTTTAATAGAGATGATGGGTGGCTTCAATTAAGTATCGGCCGCGGGAGACCTCCAACAACCTCCAATTTGGTCGAGCTAGATCTATTACCCGGCGGAGGAGGTGACAACCCCGCCGCCACCGCCACCGCCACCGCCACCACCAGCCGGGATTTCTTAACCCCTGAAGCTGCTACGACAGCTCGGTCGGAGACGGGAATGCAGTTGTTTTTTGGAACTCCTACCTCTTCCAACTTTGTACAGCAAGAGATCAATTGGGCATTCAGGCCGATATCGGCTGCGTCGTCGTCTTCTTCCTTTCTACCGGTTGGCGGTCGGCGGAGTTCTTACTTAGGTGGGCCGTTTATCCAATTCCAAAGCTCCGGGGTTCAGGCCGGCGGTGCCGGGCCGAGCTCCGACGTCAGAATCATAAATCCTCCCCGGCGGCCCCATTCTGGTATTTGGTTTACATTAAAAGCCTTAGAAAATCAATCAAAACAACCATTCTTGCCTCAGATTTCAAAAAATTATCTCAGAATCAAGTGA
Protein sequence
MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADDDSTTNSFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFLTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK
Homology
BLAST of CmoCh06G017010 vs. ExPASy Swiss-Prot
Match:
G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1)
HSP 1 Score: 47.0 bits (110), Expect = 3.5e-04
Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 0
Query: 200 VRIINPPR--RPHSGIWFTLKALENQSKQPFLPQISKNYLRIK 241
+R++ PP +G+WF L+A Q ++PFLPQI ++YLRIK
Sbjct: 272 IRVVLPPSAVAAAAGVWFVLQAAPLQGREPFLPQIPRSYLRIK 314
BLAST of CmoCh06G017010 vs. ExPASy TrEMBL
Match:
A0A6J1EXF4 (uncharacterized protein LOC111439151 OS=Cucurbita moschata OX=3662 GN=LOC111439151 PE=4 SV=1)
HSP 1 Score: 486.5 bits (1251), Expect = 6.4e-134
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADDDSTTN 60
MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADDDSTTN
Sbjct: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADDDSTTN 60
Query: 61 SFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFLT 120
SFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFLT
Sbjct: 61 SFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFLT 120
Query: 121 PEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGP 180
PEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGP
Sbjct: 121 PEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGP 180
Query: 181 FIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK 240
FIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK
Sbjct: 181 FIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK 240
BLAST of CmoCh06G017010 vs. ExPASy TrEMBL
Match:
A0A6J1I8S9 (protein LAX PANICLE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470706 PE=4 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 7.4e-114
Identity = 216/245 (88.16%), Postives = 217/245 (88.57%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPS-----AGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADD 60
MTMLPA T LSQ PS GCG DHLMNAAPP ISENYYY YSHPYLI L PPMADD
Sbjct: 1 MTMLPARTRLSQHHPSGGSYVGGCGGDHLMNAAPPLISENYYYCYSHPYLIALHPPMADD 60
Query: 61 DSTTNSFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTS 120
DSTTNSFNEEPP NRDDGWLQLSIGRGRP TSNLVELDLLPGGGGDNP TA TS
Sbjct: 61 DSTTNSFNEEPPSNRDDGWLQLSIGRGRPGRTSNLVELDLLPGGGGDNP------TAATS 120
Query: 121 RDFLTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSS 180
RDF TPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRP+SAAS SSSFLPVGGRRSS
Sbjct: 121 RDFFTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPMSAASPSSSFLPVGGRRSS 180
Query: 181 YLGGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKN 240
YLGGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSK PFLPQISKN
Sbjct: 181 YLGGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKHPFLPQISKN 239
BLAST of CmoCh06G017010 vs. ExPASy TrEMBL
Match:
A0A0A0KYQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G008840 PE=4 SV=1)
HSP 1 Score: 248.4 bits (633), Expect = 2.9e-62
Identity = 149/264 (56.44%), Postives = 169/264 (64.02%), Query Frame = 0
Query: 20 GADHLMNAAPPPISENYYYYY---SHPYLIPLPPPMADDDSTTNSFN-EEPPFNRDDGWL 79
GADHLMN P ++ YYYYY +PYLI PPMA+ DSTTNS N ++ P NRDDGWL
Sbjct: 17 GADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEGDSTTNSLNHDQAPSNRDDGWL 76
Query: 80 QLSIGRG-----------------RPPTTSNLVELDLLPGGGGDNPAATATATATTSRDF 139
QLSIG +S LVELDLLPG G D + + DF
Sbjct: 77 QLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD----ISMNYSRWVSDF 136
Query: 140 LTPEAATTARSET------GMQLFFGTPTSSNFVQQEINWAFRPI--------------S 199
+PE TT+++ET G+ LFFGT +SSNFVQQEINWAFRP+ +
Sbjct: 137 SSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGIGTGVPSSSSPST 196
Query: 200 AASSSSSFLPVGGRRSSYLGGPFIQFQSSGVQ--AGGAGPSSDVRIINPPRRPHSGIWFT 241
+A SSS LP+ GRRSSYLG P IQFQS GV AGPSSDVRIINPPRRPHSGIWFT
Sbjct: 197 SAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIINPPRRPHSGIWFT 256
BLAST of CmoCh06G017010 vs. ExPASy TrEMBL
Match:
A0A5D3E134 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002540 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 5.9e-55
Identity = 142/271 (52.40%), Postives = 163/271 (60.15%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYY--------SHPYLIPLPPPM 60
MTM+ A L+ GADHLMN P ++ YYYYY S+PYLI L PPM
Sbjct: 1 MTMVAA---LNHFSKHQHGGADHLMNGGAPLCNQYYYYYYYYYNYLGSSNPYLISLDPPM 60
Query: 61 ADDDSTTNSFN-EEPPFNRDDGWLQLSIGRG-----------------RPPTTSNLVELD 120
A+DDSTTNS N ++ P N DDGWLQLSIG P +S LVELD
Sbjct: 61 AEDDSTTNSLNHDQAPSNTDDGWLQLSIGGSGGSGNVTGLKHDERESMTPGRSSGLVELD 120
Query: 121 LLPGGGGDNPAATATATATTSRDFLTPEAATTARSET------GMQLFFGTPTSSNFVQQ 180
LLPGGG D + + DF +PE TT+++ET G+ LFFGT +SSNFVQQ
Sbjct: 121 LLPGGGRD----ISMNYSRWVSDFSSPETTTTSKTETGAEIGIGLPLFFGTSSSSNFVQQ 180
Query: 181 EINWAFRPI--------------SAASSSSSFLPVGGRRSSYLGGPFIQFQSSGVQ--AG 224
EINWAFRP+ ++A SSS LP+ GRRSSYLG P IQ QS GV
Sbjct: 181 EINWAFRPVAGIGTGVPSSSSPSTSAVSSSYSLPISGRRSSYLGRPLIQLQSVGVDTATA 240
BLAST of CmoCh06G017010 vs. ExPASy TrEMBL
Match:
A0A5A7TLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002530 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54
Identity = 141/267 (52.81%), Postives = 162/267 (60.67%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYY----YSHPYLIPLPPPMADDD 60
MTM+ A L+ GADHLMN P ++ YYYY S+PYLI L PPMA+DD
Sbjct: 1 MTMVAA---LNHFSKHQHGGADHLMNGGAPLCNQYYYYYNYLGSSNPYLISLDPPMAEDD 60
Query: 61 STTNSFN-EEPPFNRDDGWLQLSIGRG-----------------RPPTTSNLVELDLLPG 120
STTNS N ++ P N DDGWLQLSIG P +S LVELDLLPG
Sbjct: 61 STTNSLNHDQAPSNTDDGWLQLSIGGSGGSGNVTGLKHDQRESMTPGRSSGLVELDLLPG 120
Query: 121 GGGDNPAATATATATTSRDFLTPEAATTARSET------GMQLFFGTPTSSNFVQQEINW 180
GG D + + DF +PE TT+++ET G+ LFFGT +SSNFVQQEINW
Sbjct: 121 GGRD----ISMNYSRWVSDFSSPETTTTSKTETGAEIGIGLPLFFGTSSSSNFVQQEINW 180
Query: 181 AFRPI--------------SAASSSSSFLPVGGRRSSYLGGPFIQFQSSGVQ--AGGAGP 224
AFRP+ ++A SSS LP+ GRRSSYLG P IQ QS GV AGP
Sbjct: 181 AFRPVAGIGTGVPSSSSPSTSAVSSSYSLPISGRRSSYLGRPLIQLQSVGVDTATATAGP 240
BLAST of CmoCh06G017010 vs. NCBI nr
Match:
XP_022932677.1 (uncharacterized protein LOC111439151 [Cucurbita moschata])
HSP 1 Score: 486.5 bits (1251), Expect = 1.3e-133
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADDDSTTN 60
MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADDDSTTN
Sbjct: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADDDSTTN 60
Query: 61 SFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFLT 120
SFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFLT
Sbjct: 61 SFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFLT 120
Query: 121 PEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGP 180
PEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGP
Sbjct: 121 PEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGP 180
Query: 181 FIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK 240
FIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK
Sbjct: 181 FIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK 240
BLAST of CmoCh06G017010 vs. NCBI nr
Match:
KAG6597691.1 (Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 466.1 bits (1198), Expect = 1.9e-127
Identity = 234/243 (96.30%), Postives = 237/243 (97.53%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYL-IPLPPPMADDDSTT 60
MTMLPAHTPLSQL PSAGCGADHLMNAAPPPISE+YYYYYSHPYL IPLPPPMADDDSTT
Sbjct: 1 MTMLPAHTPLSQLHPSAGCGADHLMNAAPPPISEDYYYYYSHPYLIIPLPPPMADDDSTT 60
Query: 61 NSFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPA--ATATATATTSRD 120
N+FNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPG GGDNPA ATATATATTSRD
Sbjct: 61 NTFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGRGGDNPAATATATATATTSRD 120
Query: 121 FLTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYL 180
LTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYL
Sbjct: 121 LLTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYL 180
Query: 181 GGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYL 240
GGPFIQFQSSG+QAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYL
Sbjct: 181 GGPFIQFQSSGIQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYL 240
BLAST of CmoCh06G017010 vs. NCBI nr
Match:
KAG7029135.1 (E3 ubiquitin protein ligase DRIP1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 459.1 bits (1180), Expect = 2.3e-125
Identity = 232/243 (95.47%), Postives = 235/243 (96.71%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYL-IPLPPPMADDDSTT 60
MTMLPAHTPLSQL PSAGCGADHLMNAAPPPISE+YYYYYS PYL IPLPPPMADDDSTT
Sbjct: 1 MTMLPAHTPLSQLHPSAGCGADHLMNAAPPPISEDYYYYYSPPYLIIPLPPPMADDDSTT 60
Query: 61 NSFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPA--ATATATATTSRD 120
N+FNEE PFNRDDGWLQLSIGRGRPPTTSNLVELDLLPG GGDNPA ATATATATTSRD
Sbjct: 61 NTFNEESPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGRGGDNPAATATATATATTSRD 120
Query: 121 FLTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYL 180
LTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYL
Sbjct: 121 LLTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYL 180
Query: 181 GGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYL 240
GGPFIQFQSSG+QAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYL
Sbjct: 181 GGPFIQFQSSGIQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYL 240
BLAST of CmoCh06G017010 vs. NCBI nr
Match:
XP_022972063.1 (protein LAX PANICLE 2-like [Cucurbita maxima])
HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113
Identity = 216/245 (88.16%), Postives = 217/245 (88.57%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPS-----AGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMADD 60
MTMLPA T LSQ PS GCG DHLMNAAPP ISENYYY YSHPYLI L PPMADD
Sbjct: 1 MTMLPARTRLSQHHPSGGSYVGGCGGDHLMNAAPPLISENYYYCYSHPYLIALHPPMADD 60
Query: 61 DSTTNSFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTS 120
DSTTNSFNEEPP NRDDGWLQLSIGRGRP TSNLVELDLLPGGGGDNP TA TS
Sbjct: 61 DSTTNSFNEEPPSNRDDGWLQLSIGRGRPGRTSNLVELDLLPGGGGDNP------TAATS 120
Query: 121 RDFLTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSS 180
RDF TPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRP+SAAS SSSFLPVGGRRSS
Sbjct: 121 RDFFTPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPMSAASPSSSFLPVGGRRSS 180
Query: 181 YLGGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKN 240
YLGGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSK PFLPQISKN
Sbjct: 181 YLGGPFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKHPFLPQISKN 239
BLAST of CmoCh06G017010 vs. NCBI nr
Match:
XP_023540396.1 (uncharacterized protein LOC111800782 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 404.1 bits (1037), Expect = 8.7e-109
Identity = 208/241 (86.31%), Postives = 213/241 (88.38%), Query Frame = 0
Query: 1 MTMLPAHTPLSQLRPSAGCGADHLMNAAPPPISENYYYYYSHPYLIPLPPPMA-DDDSTT 60
MTMLPAHTPLSQL PS GCGA HLMNAAPP +SENYYYYYSHPYLI L PPMA DDDSTT
Sbjct: 1 MTMLPAHTPLSQLHPSRGCGAAHLMNAAPPLVSENYYYYYSHPYLIALHPPMADDDDSTT 60
Query: 61 NSFNEEPPFNRDDGWLQLSIGRGRPPTTSNLVELDLLPGGGGDNPAATATATATTSRDFL 120
N+FN++P N DDGWLQLSIGR RPPTTSNLVELDLLPGGGGDNP AT SRDFL
Sbjct: 61 NTFNQQPSSNTDDGWLQLSIGRRRPPTTSNLVELDLLPGGGGDNP-------ATASRDFL 120
Query: 121 TPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGG 180
TPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRP+ AASSSSSFLPVGGR
Sbjct: 121 TPEAATTARSETGMQLFFGTPTSSNFVQQEINWAFRPMLAASSSSSFLPVGGR------S 180
Query: 181 PFIQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRI 240
PFIQFQSSGVQAG AGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRI
Sbjct: 181 PFIQFQSSGVQAGDAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRI 228
BLAST of CmoCh06G017010 vs. TAIR 10
Match:
AT5G13250.1 (RING finger protein )
HSP 1 Score: 79.0 bits (193), Expect = 5.9e-15
Identity = 71/216 (32.87%), Postives = 102/216 (47.22%), Query Frame = 0
Query: 54 DDDSTTNSFNE------EPPFNRDDGWLQLSIGRGR--------------PPTT--SNLV 113
D++S N+ N E R GWL+LS+G PT + +
Sbjct: 95 DNNSNNNNINNNNNNEAEDHEMRQQGWLRLSLGHEEDVKPDLDHRQQHQTDPTARRDSFL 154
Query: 114 ELDLLPGGGGDN-----PAATATATATTSRDFLTPEAATTARSETGMQLFFGTPTSSNFV 173
EL+L GG P ++ + + R + + + + FV
Sbjct: 155 ELNLSSGGSNREEEVGLPLSSLFHHQHQAGGMMINPLMFHTRPQDMIGPWAAAAFRTPFV 214
Query: 174 QQEINWAFRPISAASSSSSFLPVGGRRSSYLGGPFIQFQSSGVQ--AGGAGPSSDVRIIN 233
Q + +P S++SS S +P+ G+ Y G Q Q G G AGPSS +R+I+
Sbjct: 215 PQNLT---QP-SSSSSGSLMMPLMGQ---YFGRSSFQPQLIGNDNPDGVAGPSSSLRVID 274
Query: 234 PPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK 241
PPRRPHSGIWF L+A +NQ+ +PFLPQI K+YLRIK
Sbjct: 275 PPRRPHSGIWFLLQASQNQTVEPFLPQIPKSYLRIK 303
BLAST of CmoCh06G017010 vs. TAIR 10
Match:
AT1G28080.1 (RING finger protein )
HSP 1 Score: 73.2 bits (178), Expect = 3.3e-13
Identity = 71/239 (29.71%), Postives = 105/239 (43.93%), Query Frame = 0
Query: 29 PPPISENYYYYYSHPYLIPLPPPMADDDSTTNSFNEEPPFNRDDGWLQLSIGRGRPPTTS 88
P P S +YY S P P D S N + N+D WL+L IG S
Sbjct: 45 PAPGSTDYYNISSSPVKDDGTAPKND---VVCSINVDD--NKDKSWLRLGIGPEENTDGS 104
Query: 89 NLVELDLLPGGGGDNPA------ATATATATTSRDFLTPEAA------------------ 148
++ G G + ++++ ++S D L +
Sbjct: 105 YKLQRCCSKNGSGRENSLELSLFSSSSTAVSSSIDHLPTQPLQLPYHHDQLLTMRGPSLV 164
Query: 149 ---TTARSETGMQLFFGTPTSSNFVQQEINWAFRPISAASSSSSFLPVGGRRSSYLGGPF 208
+ +T + F P+S ++ Q + FRP SS S V S
Sbjct: 165 YNHQLMKPQTLLNRGFSFPSSKPWIPQYMA-PFRP-----SSLSDRDVTNNNS------- 224
Query: 209 IQFQSSGVQAGGAGPSSDVRIINPPRRPHSGIWFTLKALENQSKQPFLPQISKNYLRIK 241
+S V GGAGPSS+ R+++PPRRPHSG+WF L+A + Q ++PFLPQ++K+YLRIK
Sbjct: 225 -LSRSCCVDEGGAGPSSEFRVLDPPRRPHSGLWFLLQASQFQEREPFLPQVNKSYLRIK 264
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
G3XKQ9 | 3.5e-04 | 46.51 | Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EXF4 | 6.4e-134 | 100.00 | uncharacterized protein LOC111439151 OS=Cucurbita moschata OX=3662 GN=LOC1114391... | [more] |
A0A6J1I8S9 | 7.4e-114 | 88.16 | protein LAX PANICLE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470706 PE=4 SV=1 | [more] |
A0A0A0KYQ8 | 2.9e-62 | 56.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G008840 PE=4 SV=1 | [more] |
A0A5D3E134 | 5.9e-55 | 52.40 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TLY8 | 2.3e-54 | 52.81 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
XP_022932677.1 | 1.3e-133 | 100.00 | uncharacterized protein LOC111439151 [Cucurbita moschata] | [more] |
KAG6597691.1 | 1.9e-127 | 96.30 | Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAG7029135.1 | 2.3e-125 | 95.47 | E3 ubiquitin protein ligase DRIP1, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022972063.1 | 1.5e-113 | 88.16 | protein LAX PANICLE 2-like [Cucurbita maxima] | [more] |
XP_023540396.1 | 8.7e-109 | 86.31 | uncharacterized protein LOC111800782 [Cucurbita pepo subsp. pepo] | [more] |