CmoCh06G016470 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G016470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	calmodulin-like protein 3
Location	Cmo_Chr06: 11452991 .. 11453443 (-)
RNA-Seq Expression	CmoCh06G016470
Synteny	CmoCh06G016470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCGAATCACGAAGAAGGAACTAAACGACTCGTTAGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGATGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

mRNA sequence

ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCGAATCACGAAGAAGGAACTAAACGACTCGTTAGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGATGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

Coding sequence (CDS)

ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCGAATCACGAAGAAGGAACTAAACGACTCGTTAGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGATGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

Protein sequence

MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

Homology

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BLAST of CmoCh06G016470 vs. ExPASy Swiss-Prot
Match: Q9SRR7 (Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-69
Identity = 129/150 (86.00%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL R+FQMFDRNGDG+ITK+ELNDSLENLGI+IPDKDL QMIEKID+N DGYVDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM E+DEEEDMREAFNVFDQN DGFITVEELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

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BLAST of CmoCh06G016470 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.2e-64
Identity = 119/150 (79.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFD+NGDG IT KEL+++L +LGI+IPDK+LTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKD-EEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKK 120
           EFGELY++IM+E+D EEEDM+EAFNVFDQNGDGFITV+EL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMKGGGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

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BLAST of CmoCh06G016470 vs. ExPASy Swiss-Prot
Match: O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-61
Identity = 117/153 (76.47%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           +DP+EL+RVFQMFD+NGDGRITK+ELNDSLENLGI+IPDKDLTQMI KID N DG VDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMNE-----KDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVE 120
           EF  LY SI++E     + EEEDM++AFNVFDQ+GDGFITVEEL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

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BLAST of CmoCh06G016470 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.2e-58
Identity = 109/149 (73.15%), Postives = 129/149 (86.58%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVN DG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++ EK+EEEDMREAF VFDQNGDGFIT EELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

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BLAST of CmoCh06G016470 vs. ExPASy Swiss-Prot
Match: Q9LX27 (Calmodulin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=CML4 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.2e-56
Identity = 110/145 (75.86%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 3   PTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEF 62
           P +L+RVFQMFD+NGDGRITK+ELNDSLENLGIF+PDKDL QMI+K+D N DG VDI+EF
Sbjct: 49  PVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEF 108

Query: 63  GELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIM 122
             LY SI+ EK EE DMR+AFNVFDQ+GDGFITVEEL SV+ SLGLKQG+T+E CK+MIM
Sbjct: 109 ESLYGSIVEEK-EEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIM 168

Query: 123 KVDVDGDGMVNYKEFKQMMKGGGFS 148
           +VD DGDG VNYKEF QMMK G FS
Sbjct: 169 QVDEDGDGRVNYKEFLQMMKSGDFS 192

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BLAST of CmoCh06G016470 vs. ExPASy TrEMBL
Match: A0A6J1EX62 (calmodulin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111439186 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.0e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of CmoCh06G016470 vs. ExPASy TrEMBL
Match: A0A6J1IAJ7 (calmodulin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111470746 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.0e-77
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDG+ITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of CmoCh06G016470 vs. ExPASy TrEMBL
Match: A0A6J1CVD5 (calmodulin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111014628 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNCDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of CmoCh06G016470 vs. ExPASy TrEMBL
Match: D1MWZ5 (Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitCaEFh PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74
Identity = 144/150 (96.00%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of CmoCh06G016470 vs. ExPASy TrEMBL
Match: A0A1S3BXJ7 (calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74
Identity = 144/150 (96.00%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of CmoCh06G016470 vs. NCBI nr
Match: XP_022932721.1 (calmodulin-like protein 3 [Cucurbita moschata] >KAG6597646.1 Calmodulin-like protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029087.1 Calmodulin-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of CmoCh06G016470 vs. NCBI nr
Match: XP_022972114.1 (calmodulin-like protein 3 [Cucurbita maxima] >XP_023540679.1 calmodulin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.1 bits (762), Expect = 4.2e-77
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDG+ITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of CmoCh06G016470 vs. NCBI nr
Match: XP_022145111.1 (calmodulin-like protein 3 [Momordica charantia])

HSP 1 Score: 287.7 bits (735), Expect = 5.7e-74
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNCDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of CmoCh06G016470 vs. NCBI nr
Match: XP_004152098.1 (calmodulin-like protein 3 [Cucumis sativus] >XP_008453977.1 PREDICTED: calmodulin-like protein 3 [Cucumis melo] >XP_038878708.1 calmodulin-like protein 3 [Benincasa hispida] >KAE8649113.1 hypothetical protein Csa_015095 [Cucumis sativus] >BAI52955.1 calcium-binding EF-hand protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 287.7 bits (735), Expect = 5.7e-74
Identity = 144/150 (96.00%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of CmoCh06G016470 vs. NCBI nr
Match: XP_022979973.1 (calmodulin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-73
Identity = 143/150 (95.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFDRNGDGRIT+KEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+EKDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of CmoCh06G016470 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 )

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-70
Identity = 129/150 (86.00%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL R+FQMFDRNGDG+ITK+ELNDSLENLGI+IPDKDL QMIEKID+N DGYVDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM E+DEEEDMREAFNVFDQN DGFITVEELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]

BLAST of CmoCh06G016470 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 245.4 bits (625), Expect = 3.0e-65
Identity = 119/150 (79.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFD+NGDG IT KEL+++L +LGI+IPDK+LTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKD-EEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKK 120
           EFGELY++IM+E+D EEEDM+EAFNVFDQNGDGFITV+EL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMKGGGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

[Close]

BLAST of CmoCh06G016470 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-62
Identity = 117/153 (76.47%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           +DP+EL+RVFQMFD+NGDGRITK+ELNDSLENLGI+IPDKDLTQMI KID N DG VDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMNE-----KDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVE 120
           EF  LY SI++E     + EEEDM++AFNVFDQ+GDGFITVEEL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]

BLAST of CmoCh06G016470 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 227.3 bits (578), Expect = 8.4e-60
Identity = 109/149 (73.15%), Postives = 129/149 (86.58%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVN DG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++ EK+EEEDMREAF VFDQNGDGFIT EELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]

BLAST of CmoCh06G016470 vs. TAIR 10
Match: AT3G59440.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 218.8 bits (556), Expect = 3.0e-57
Identity = 110/145 (75.86%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 3   PTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEF 62
           P +L+RVFQMFD+NGDGRITK+ELNDSLENLGIF+PDKDL QMI+K+D N DG VDI+EF
Sbjct: 49  PVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEF 108

Query: 63  GELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIM 122
             LY SI+ EK EE DMR+AFNVFDQ+GDGFITVEEL SV+ SLGLKQG+T+E CK+MIM
Sbjct: 109 ESLYGSIVEEK-EEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIM 168

Query: 123 KVDVDGDGMVNYKEFKQMMKGGGFS 148
           +VD DGDG VNYKEF QMMK G FS
Sbjct: 169 QVDEDGDGRVNYKEFLQMMKSGDFS 192

The following BLAST results are available for this feature:

BLAST of CmoCh06G016470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRR7	1.5e-69	86.00	Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1	[more]
Q9LNE7	4.2e-64	79.33	Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1	[more]
O22845	2.6e-61	76.47	Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2	[more]
Q9SU00	1.2e-58	73.15	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]
Q9LX27	4.2e-56	75.86	Calmodulin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=CML4 PE=2 SV=1	[more]

BLAST of CmoCh06G016470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EX62	7.0e-78	100.00	calmodulin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111439186 PE=4 SV=...	[more]
A0A6J1IAJ7	2.0e-77	99.33	calmodulin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111470746 PE=4 SV=1	[more]
A0A6J1CVD5	2.7e-74	96.67	calmodulin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111014628 PE=4 SV...	[more]
D1MWZ5	2.7e-74	96.00	Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 G...	[more]
A0A1S3BXJ7	2.7e-74	96.00	calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1	[more]

BLAST of CmoCh06G016470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932721.1	1.4e-77	100.00	calmodulin-like protein 3 [Cucurbita moschata] >KAG6597646.1 Calmodulin-like pro...	[more]
XP_022972114.1	4.2e-77	99.33	calmodulin-like protein 3 [Cucurbita maxima] >XP_023540679.1 calmodulin-like pro...	[more]
XP_022145111.1	5.7e-74	96.67	calmodulin-like protein 3 [Momordica charantia]	[more]
XP_004152098.1	5.7e-74	96.00	calmodulin-like protein 3 [Cucumis sativus] >XP_008453977.1 PREDICTED: calmoduli...	[more]
XP_022979973.1	1.6e-73	95.33	calmodulin-like protein 3 [Cucurbita maxima]	[more]

BLAST of CmoCh06G016470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07490.1	1.1e-70	86.00	ARF-GAP domain 11	[more]
AT1G05990.1	3.0e-65	79.33	EF hand calcium-binding protein family	[more]
AT2G43290.1	1.8e-62	76.47	Calcium-binding EF-hand family protein	[more]
AT4G12860.1	8.4e-60	73.15	EF hand calcium-binding protein family	[more]
AT3G59440.1	3.0e-57	75.86	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01697	PARVALBUMIN	coord: 87..103 score: 44.85 coord: 65..83 score: 15.39 coord: 124..137 score: 49.64
None	No IPR available	GENE3D	1.10.238.10		coord: 68..144 e-value: 5.2E-25 score: 89.6
None	No IPR available	GENE3D	1.10.238.10		coord: 3..67 e-value: 7.1E-19 score: 69.8
None	No IPR available	PANTHER	PTHR10891:SF901	EF HAND CALCIUM-BINDING FAMILY PROTEIN	coord: 1..149
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 1..149
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 5..33 e-value: 1.4E-4 score: 31.3 coord: 116..144 e-value: 4.5E-5 score: 32.9 coord: 78..106 e-value: 4.2E-7 score: 39.6 coord: 41..69 e-value: 1.3E-4 score: 31.3
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 76..142 e-value: 1.2E-13 score: 51.3 coord: 5..67 e-value: 7.7E-13 score: 48.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 112..147 score: 15.071314
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 37..72 score: 13.034948
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 74..109 score: 17.358736
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 1..36 score: 14.5413
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 78..142 e-value: 2.9399E-16 score: 66.4173
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 14..26
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 87..99
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 50..62
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 125..137
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 5..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G016470.1	CmoCh06G016470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding