CmoCh06G016150 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G016150
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr06: 11293161 .. 11294050 (-)
RNA-Seq ExpressionCmoCh06G016150
SyntenyCmoCh06G016150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCAAGGTTCGAGTGATCCGTAGCATACAGCTCTTGATCCACTTGGTGTAATAGTTCAAACTTGAGATATGTGATCTCACAATTCACTCCTTCAGGGTCCAATGTGCTCGTCATTCTCCTCTCCAGTTGATGTAATTCACTCCCATTCGGGGCCTAACGTCCTCGTCGTTAATTAGTGAACTTAGGACTATTCCTCTCGTTCATATGTGGTGAAAATGACGTGGAAATAAAGAAATACCTACGTGTCCATGGAAATTAAATGCACTAGAGTTAGGAATCCTTTCAATAAAATCTTCATTCAATTTATCAACAGCCAATTGTAAGAGACCATCTCTCATTGAATTTATGCAGAAAGTAGCAATGGTTCTTTATTGATCGCCATTAATGCTTGACCTTTGAGTTTTCGTCTTTTCCGGAGCCTTCCATCCTTCCTTCAATGGCCGCAACGGTTCTTCAGATGCTTTTCTTTGTTCTAAAGCAACCAAGCTCCACCTAAATCACGAATCTTCTCAAAGCTCTGAAAGTGGAGAAACAAACAAGTCGTTTGCTCTACTTTTTCAATCTCCAAGCGTTTCAATGAAAACAACATGTGGAAATTTTGAGAAGATTGTTCTTACTAAGGTAGATGGTAGAAGTTGAAATTTCTTCCAAGATTGCGTGGTTTTGTTCTTTCTTTTTCTCTGGTTAGGGTTTTTAGTGCGTTGTCATTGCTGGAATCTCTGCTCTGCAGCTTGCGATTGAGGTTGCTTTCTCCTGTTTCTTCGATTGCGCGCTCGTAAGTCGTTGGTATGGATTTGCTTCGGTTTCTTGTAAATTATTGAAGCCTTTTCTTACCAATTTTGTTTACTATTCATCTGAGATTGGAACTGTGCTCTTGCAAGTTTAG

mRNA sequence

ATGTATCAAGTTTTCGTCTTTTCCGGAGCCTTCCATCCTTCCTTCAATGGCCGCAACGGTTCTTCAGATGCTTTTCTTTGTTCTAAAGCAACCAAGCTCCACCTAAATCACGAATCTTCTCAAAGCTCTGAAAGTGGAGAAACAAACAAGTCGTTTGCTCTACTTTTTCAATCTCCAAGCGTTTCAATGAAAACAACATGTGGAAATTTTGAGAAGATTGTTCTTACTAAGTGCGTTGTCATTGCTGGAATCTCTGCTCTGCAGCTTGCGATTGAGGTTGCTTTCTCCTGTTTCTTCGATTGCGCGCTCGTAAGTCGTTGGTATGGATTTGCTTCGGTTTCTTGTAAATTATTGAAGCCTTTTCTTACCAATTTTGTTTACTATTCATCTGAGATTGGAACTGTGCTCTTGCAAGTTTAG

Coding sequence (CDS)

ATGTATCAAGTTTTCGTCTTTTCCGGAGCCTTCCATCCTTCCTTCAATGGCCGCAACGGTTCTTCAGATGCTTTTCTTTGTTCTAAAGCAACCAAGCTCCACCTAAATCACGAATCTTCTCAAAGCTCTGAAAGTGGAGAAACAAACAAGTCGTTTGCTCTACTTTTTCAATCTCCAAGCGTTTCAATGAAAACAACATGTGGAAATTTTGAGAAGATTGTTCTTACTAAGTGCGTTGTCATTGCTGGAATCTCTGCTCTGCAGCTTGCGATTGAGGTTGCTTTCTCCTGTTTCTTCGATTGCGCGCTCGTAAGTCGTTGGTATGGATTTGCTTCGGTTTCTTGTAAATTATTGAAGCCTTTTCTTACCAATTTTGTTTACTATTCATCTGAGATTGGAACTGTGCTCTTGCAAGTTTAG

Protein sequence

MYQVFVFSGAFHPSFNGRNGSSDAFLCSKATKLHLNHESSQSSESGETNKSFALLFQSPSVSMKTTCGNFEKIVLTKCVVIAGISALQLAIEVAFSCFFDCALVSRWYGFASVSCKLLKPFLTNFVYYSSEIGTVLLQV
Homology
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BLAST of CmoCh06G016150 vs. NCBI nr
Match: KAG6597623.1 (Protein ENHANCED DISEASE RESISTANCE 2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.7 bits (234), Expect = 6.5e-16
Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 0 

Query: 63  MKTTCGNFEKIVLTKCVVIAGISALQLAIEVAFSCFFDCALVSRWYGFASVSCKLLKPFL 122
           MKTTCGNFEKIVLTKCVVIAGISALQLAIEVAFSC FDCALVS W  +      LLKP  
Sbjct: 1   MKTTCGNFEKIVLTKCVVIAGISALQLAIEVAFSCLFDCALVSCWMSYGKCE-TLLKPLG 60

Query: 123 TNFVYYSSEIGTVL 137
            +++  S++IG +L
Sbjct: 61  FDWIRSSAKIGEIL 73

The following BLAST results are available for this feature:
BLAST of CmoCh06G016150 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh06G016150 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh06G016150 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6597623.16.5e-1668.92Protein ENHANCED DISEASE RESISTANCE 2-like protein, partial [Cucurbita argyrospe... [more]
BLAST of CmoCh06G016150 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G016150.1CmoCh06G016150.1mRNA