CmoCh06G016030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G016030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH62-like
Location	Cmo_Chr06: 11225025 .. 11227751 (-)
RNA-Seq Expression	CmoCh06G016030
Synteny	CmoCh06G016030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCTTCCCTTTATTATCTATGTTGCTTCCCTTCCACTTCCCCACATTTCTCACTCCATTTCTCTCTGTATTTGCTTTCTCTCTCCTCTCTCTCTCTCCTCTTCTCTTTTTAATCTGCTCTTCATTTTGAGCCCACGAACTAACGAAGAAATCATTTCATTGTTGTTGCTTCTTTATCTCAAAAATCTCTCCTCGCCATTGTTGTTCTTGTTTTCTTGCAGAGAAAGATTCTGGGTAGGGTTTTTTTTTGTTCTGTTTTCTGTTGATTTTTTGGTTTTGGCACAGTTCTTCATCGGAAATTTGTGTGATTCTTCGTCGATATGGAGAAGGAGTTCTTCATGAACGATGGAAGCAGTTTTTATGGGATGGATTCGAGTGTGTTGTTCAATTCCAATTGGGAAAATTCGATGGATCAGAGCGATCTCTTTGAGTCTACTTTGAGTTCGATTGTGTCTTCTCCGGCGAATTCACACGCTGGGGCTGTAATCGGCGGTGGTAGTGGCGGCGGCGACAACTTGATGATGCGAGAATTGATCGGAAGGCTTGGAAGTATTTGTAGTTCTGGTGAGATTTCGCCTCATTCTTACATTGGTGGGACGAACAATAATAGTACCAATACTTCTTGTTACAATACGCCTTTGAATTCCCCTCCGATGAAGGGAAATTTATCTGTCGGTCACCATCAAAATCTAGCTCCATTTTCGGCTGATCCAGGTTTAGCTGAAAGGGTTGCGAGATTTTCTTGCTTTGGGAACAAGAATCTTGCAGTGAATGGGCAATTGTGTTCTAATGAAACTCAAGAATTGAGCAACAAGTCAATGGCTGGAGCTGGTGTGGAATCTGGCAAGCTTTCTAGGGTTTCAAGTAACAAATCCTTCAATGTTAGTGGAATTGGATCTCAAATGGGAGTTCAGAAGGGAAATTCTATGGCTAACAAGAAAGTTATGAACAGGTTTTCGAGGTCTTCGACCCCCGAAAATGACGATTCGCGGGAGGGATCGTCGGTTTCGGAGCAGATTACAGCTGGGGAATTAGGATTCAAAGTTAACACTAGGAAAAGGAAATCAGCTCATACTGGTGAAGCAAAGAATGTGAAGGTATATGTTTACAAATTTTGCATTTCCTTTGAAAATTCTGTATCTGCTGATGAACTCAATGGAAAAAAATGGCACTAAAAGTTGTTGTTTCAGGCTGCAGGGGAGAATCATGAACCAAATGGCAAGAAAATCAAACCAGAGATGGATGCTGCAAAGGGGAAGGCTGAGGCAAAAGATGCAACTCAGAAACAAAACAATGATAATTCAAAGCCTCCAGAGCCTCCAAAGGATTATATCCATGTTAGAGCTAAAAGGGGTCAAGCTACAGATAGCCATAGTTTAGCTGAAAGAGTGAGAGCCAAAGCACTCATTGTATATAACTTGTTTCGCACTCGAGTTTGATTCGAATGCTCACAATTCCTGTTTTCGTTGTCGTTCGTGCAGATCCGACGAGAGAAAATCAGCAAACGGATGAAGTTTCTTCAAGATCTCGTCCCCGGTTGCAATAAGGTACTTGGATCTTAAAATTCTTAAACATGAGATCATTGGTATGAAAATCAAGTTCTAAAGTCGAGTTGTTTTTTCACTTACAGATAACTGGGAAGGCAGTGATGCTTGATGAAATTATAAACTATGTTCAATCTTTGCAGCACCAAGTTGAGGTAATCATCAAATATTCAAACGATCTGCCATAGTTCTTTATGTTCATATCTATAGTTTTCTGAGTTGTGTTAGAATTTCTGCAGTTTCTTTCAATGAAATTGGCTACTGTCAATCCAAGGATGGATTTTAACATGGAAACTCTTTTGCCAAAGGATGTAAGTGAAAAACAAACCATTTTTTAGTGGATAACTTAGTGAAACACTTCTGGGTTATGACTAATTTTGTGTGATAACATATCTCAGATCTTCAAAGGTTCGAGTTCGTTACCGCATACGATTTACCCTATTGATTCGTCTGTGCCCACTTTTGCATATGAGTATCAATCTATGAACATTCCTCCTCTTCATAGTGATCAAACGCAGGGTGGATACCACAAAATGGGGAATGGAATCCAAGTAAATTGCTAATCTGTTTCCTCAAATGTACTGAAACTAATATCTTTGCATAGCATAGTCTAAAAATCATCTCTGAATTGCTATCAGATTTCCAAGTTTTGGGAGGATGAACTCCACAGTGTAGTTCAGATGGGTTATGTACAAACCCAGCTGCAGAATCCTCATGGTAAGATAGCCATAGAACTTTTAGCTTTTCGGGTTTGATTCGATCGAAAATCTTGTAACTGAATTTGAAGGTATTATGGGTGCAGGTGAGATGAAAAGTGAATTGTAAAAGAATGAAAGAACTGGTGAAATCCATGGCGGCCCCCCCACGGCGAGTGAGGCTTTGTGTACATAGAGAGGGATTCCAGTTGCATTTTTTTGTTGTTTCTGAACATTATGTATCAGCCACTCATTCTTTTGGAGAGCTCTTCAAGAACTAATTGCAAGAACTAATTGCAGCAGCAGCAGCAAAGCTGATGGTGGCCTCAAGTTTTTATCAGACCACATTTGAATGCTTTTCTCTTTATAGCCATTTGTAAAAGTAGTGTTGGAAAAGACTGAAAAGTTCTGATATCTCAATCCAACCCCCCTGTGTATTACCATTACTCATAAATCATAAATCTTATCATTGTTCTTCTCTCACAAA

mRNA sequence

TCTCCTTCCCTTTATTATCTATGTTGCTTCCCTTCCACTTCCCCACATTTCTCACTCCATTTCTCTCTGTATTTGCTTTCTCTCTCCTCTCTCTCTCTCCTCTTCTCTTTTTAATCTGCTCTTCATTTTGAGCCCACGAACTAACGAAGAAATCATTTCATTGTTGTTGCTTCTTTATCTCAAAAATCTCTCCTCGCCATTGTTGTTCTTGTTTTCTTGCAGAGAAAGATTCTGGGTAGGGTTTTTTTTTGTTCTGTTTTCTGTTGATTTTTTGGTTTTGGCACAGTTCTTCATCGGAAATTTGTGTGATTCTTCGTCGATATGGAGAAGGAGTTCTTCATGAACGATGGAAGCAGTTTTTATGGGATGGATTCGAGTGTGTTGTTCAATTCCAATTGGGAAAATTCGATGGATCAGAGCGATCTCTTTGAGTCTACTTTGAGTTCGATTGTGTCTTCTCCGGCGAATTCACACGCTGGGGCTGTAATCGGCGGTGGTAGTGGCGGCGGCGACAACTTGATGATGCGAGAATTGATCGGAAGGCTTGGAAGTATTTGTAGTTCTGGTGAGATTTCGCCTCATTCTTACATTGGTGGGACGAACAATAATAGTACCAATACTTCTTGTTACAATACGCCTTTGAATTCCCCTCCGATGAAGGGAAATTTATCTGTCGGTCACCATCAAAATCTAGCTCCATTTTCGGCTGATCCAGGTTTAGCTGAAAGGGTTGCGAGATTTTCTTGCTTTGGGAACAAGAATCTTGCAGTGAATGGGCAATTGTGTTCTAATGAAACTCAAGAATTGAGCAACAAGTCAATGGCTGGAGCTGGTGTGGAATCTGGCAAGCTTTCTAGGGTTTCAAGTAACAAATCCTTCAATGTTAGTGGAATTGGATCTCAAATGGGAGTTCAGAAGGGAAATTCTATGGCTAACAAGAAAGTTATGAACAGGTTTTCGAGGTCTTCGACCCCCGAAAATGACGATTCGCGGGAGGGATCGTCGGTTTCGGAGCAGATTACAGCTGGGGAATTAGGATTCAAAGTTAACACTAGGAAAAGGAAATCAGCTCATACTGGTGAAGCAAAGAATGTGAAGGCTGCAGGGGAGAATCATGAACCAAATGGCAAGAAAATCAAACCAGAGATGGATGCTGCAAAGGGGAAGGCTGAGGCAAAAGATGCAACTCAGAAACAAAACAATGATAATTCAAAGCCTCCAGAGCCTCCAAAGGATTATATCCATGTTAGAGCTAAAAGGGGTCAAGCTACAGATAGCCATAGTTTAGCTGAAAGAGTGAGAGCCAAAGCACTCATTATCCGACGAGAGAAAATCAGCAAACGGATGAAGTTTCTTCAAGATCTCGTCCCCGGTTGCAATAAGATAACTGGGAAGGCAGTGATGCTTGATGAAATTATAAACTATGTTCAATCTTTGCAGCACCAAGTTGAGTTTCTTTCAATGAAATTGGCTACTGTCAATCCAAGGATGGATTTTAACATGGAAACTCTTTTGCCAAAGGATATCTTCAAAGGTTCGAGTTCGTTACCGCATACGATTTACCCTATTGATTCGTCTGTGCCCACTTTTGCATATGAGTATCAATCTATGAACATTCCTCCTCTTCATAGTGATCAAACGCAGGGTGGATACCACAAAATGGGGAATGGAATCCAAATTTCCAAGTTTTGGGAGGATGAACTCCACAGTGTAGTTCAGATGGGTTATGTACAAACCCAGCTGCAGAATCCTCATGGTGAGATGAAAAGTGAATTGTAAAAGAATGAAAGAACTGGTGAAATCCATGGCGGCCCCCCCACGGCGAGTGAGGCTTTGTGTACATAGAGAGGGATTCCAGTTGCATTTTTTTGTTGTTTCTGAACATTATGTATCAGCCACTCATTCTTTTGGAGAGCTCTTCAAGAACTAATTGCAAGAACTAATTGCAGCAGCAGCAGCAAAGCTGATGGTGGCCTCAAGTTTTTATCAGACCACATTTGAATGCTTTTCTCTTTATAGCCATTTGTAAAAGTAGTGTTGGAAAAGACTGAAAAGTTCTGATATCTCAATCCAACCCCCCTGTGTATTACCATTACTCATAAATCATAAATCTTATCATTGTTCTTCTCTCACAAA

Coding sequence (CDS)

ATGGAGAAGGAGTTCTTCATGAACGATGGAAGCAGTTTTTATGGGATGGATTCGAGTGTGTTGTTCAATTCCAATTGGGAAAATTCGATGGATCAGAGCGATCTCTTTGAGTCTACTTTGAGTTCGATTGTGTCTTCTCCGGCGAATTCACACGCTGGGGCTGTAATCGGCGGTGGTAGTGGCGGCGGCGACAACTTGATGATGCGAGAATTGATCGGAAGGCTTGGAAGTATTTGTAGTTCTGGTGAGATTTCGCCTCATTCTTACATTGGTGGGACGAACAATAATAGTACCAATACTTCTTGTTACAATACGCCTTTGAATTCCCCTCCGATGAAGGGAAATTTATCTGTCGGTCACCATCAAAATCTAGCTCCATTTTCGGCTGATCCAGGTTTAGCTGAAAGGGTTGCGAGATTTTCTTGCTTTGGGAACAAGAATCTTGCAGTGAATGGGCAATTGTGTTCTAATGAAACTCAAGAATTGAGCAACAAGTCAATGGCTGGAGCTGGTGTGGAATCTGGCAAGCTTTCTAGGGTTTCAAGTAACAAATCCTTCAATGTTAGTGGAATTGGATCTCAAATGGGAGTTCAGAAGGGAAATTCTATGGCTAACAAGAAAGTTATGAACAGGTTTTCGAGGTCTTCGACCCCCGAAAATGACGATTCGCGGGAGGGATCGTCGGTTTCGGAGCAGATTACAGCTGGGGAATTAGGATTCAAAGTTAACACTAGGAAAAGGAAATCAGCTCATACTGGTGAAGCAAAGAATGTGAAGGCTGCAGGGGAGAATCATGAACCAAATGGCAAGAAAATCAAACCAGAGATGGATGCTGCAAAGGGGAAGGCTGAGGCAAAAGATGCAACTCAGAAACAAAACAATGATAATTCAAAGCCTCCAGAGCCTCCAAAGGATTATATCCATGTTAGAGCTAAAAGGGGTCAAGCTACAGATAGCCATAGTTTAGCTGAAAGAGTGAGAGCCAAAGCACTCATTATCCGACGAGAGAAAATCAGCAAACGGATGAAGTTTCTTCAAGATCTCGTCCCCGGTTGCAATAAGATAACTGGGAAGGCAGTGATGCTTGATGAAATTATAAACTATGTTCAATCTTTGCAGCACCAAGTTGAGTTTCTTTCAATGAAATTGGCTACTGTCAATCCAAGGATGGATTTTAACATGGAAACTCTTTTGCCAAAGGATATCTTCAAAGGTTCGAGTTCGTTACCGCATACGATTTACCCTATTGATTCGTCTGTGCCCACTTTTGCATATGAGTATCAATCTATGAACATTCCTCCTCTTCATAGTGATCAAACGCAGGGTGGATACCACAAAATGGGGAATGGAATCCAAATTTCCAAGTTTTGGGAGGATGAACTCCACAGTGTAGTTCAGATGGGTTATGTACAAACCCAGCTGCAGAATCCTCATGGTGAGATGAAAAGTGAATTGTAA

Protein sequence

MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGSGGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGNLSVGHHQNLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGFKVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPPEPPKDYIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSVPTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQNPHGEMKSEL

Homology

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BLAST of CmoCh06G016030 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.2e-65
Identity = 199/519 (38.34%), Postives = 265/519 (51.06%), Query Frame = 0


Query: 1   MEKEFFMNDGSSF---------------------YGMDSSVLFNSNWENSMDQSDLFEST 60
           ME E FMN G S                        +D S+  N  WE S +QS +F+S 
Sbjct: 1   MENELFMNAGVSHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQS-IFDSA 60

Query: 61  LSSIVSSPANSHAGAVIGGGSGGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTN 120
           LSS+VSSP  S++   +GG   GG+N++MRELIG+LG+I   G+I      G T +N   
Sbjct: 61  LSSLVSSPTPSNSNFSVGG--VGGENVIMRELIGKLGNI---GDI-----YGITASN--G 120

Query: 121 TSCYNTPLNSPPMKGNLSVGHHQNLAPFSADPGLAERVARFSCFGNK--NLAVNGQLCSN 180
            SCY TP++SPP    +       +A  S DPG AER ARFSCFG++  N   N     N
Sbjct: 121 NSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARFSCFGSRSFNSRTNSPFPIN 180

Query: 181 ETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSST 240
               ++            K+ RVSS+  F                            S  
Sbjct: 181 NEPPITTNE---------KMPRVSSSPVFKPLA------------------------SHV 240

Query: 241 PENDDSREGSSVSEQITAGELGFKVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMD 300
           P  + S            GEL  K  T+ ++++ +  + + K   E  + + K+ K    
Sbjct: 241 PAGESS------------GELSRKRKTKSKQNSPSAVSSS-KEIEEKEDSDPKRCK---- 300

Query: 301 AAKGKAEAKDATQKQNNDNSKPPEPPKDYIHVRAKRGQATDSHSLAERVRAKALIIRREK 360
                        ++N D +K  +P KDYIHVRA+RGQATDSHSLAERV       RREK
Sbjct: 301 -----------KSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERV-------RREK 360

Query: 361 ISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETL 420
           IS+RMK LQDLVPGCNK+TGKA+MLDEIINYVQSLQ QVEFLSMKL++VN R+DFNM+ L
Sbjct: 361 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDAL 420

Query: 421 LPKDIFKGSSSLPH--TIYPIDSSVPTFAYEYQSMN------------IPPLHSDQTQGG 476
           L KDIF  S++L H   +  +DSS  T   ++ + N            I PL + +T+  
Sbjct: 421 LSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNPDISSNNVINPLETSETRSF 438

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BLAST of CmoCh06G016030 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-59
Identity = 174/397 (43.83%), Postives = 228/397 (57.43%), Query Frame = 0


Query: 17  DSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGSGGGDNLMMRELIGRLG 76
           DSS L+  + E    QS +F+S LSS+VSSP  S++        GGGD  ++RELIG+LG
Sbjct: 45  DSSFLWEKSTEQQQQQS-IFDSALSSLVSSPTPSNSNF----SGGGGDGFLIRELIGKLG 104

Query: 77  SICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGN----LSVGHHQNLAPFSADPG 136
           +I ++   S   Y  GT   S + SCY TP++SPP   N    + +     L  FSADPG
Sbjct: 105 NIGNNNNNSGEIY--GT-PMSRSASCYATPMSSPPPPTNSNSQMMMNRTTPLTEFSADPG 164

Query: 137 LAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIG 196
            AER ARFSCFG+++   NG+  +N      N  +      SGKL+RVSS  +       
Sbjct: 165 FAERAARFSCFGSRSF--NGRTNTNLPINNGNNMVN----NSGKLTRVSSTPALKAL--- 224

Query: 197 SQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGFKVNTRKRKSAHT 256
               V  G   + K+      +  + EN  S    S S   TA + G K  ++       
Sbjct: 225 VSPEVTPGGEFSRKR--KSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSK------- 284

Query: 257 GEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPPEPPKDYIHVRAK 316
                      + E  GK+ + E D  + + E     +   ++N+KPPEPPKDYIHVRA+
Sbjct: 285 ----------SSEEKGGKRRREEEDDEEEEGEG----EGNKSNNTKPPEPPKDYIHVRAR 344

Query: 317 RGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSL 376
           RGQATDSHSLAERV       RREKI +RMK LQDLVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 345 RGQATDSHSLAERV-------RREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 394

Query: 377 QHQVEFLSMKLATVN-PRMDFNMETLLPKDIFKGSSS 409
           Q QVEFLSMKL++VN  R+DFN++ L+ KD+   SS+
Sbjct: 405 QRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSN 394

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BLAST of CmoCh06G016030 vs. ExPASy Swiss-Prot
Match: Q9LK48 (Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.4e-45
Identity = 146/350 (41.71%), Postives = 193/350 (55.14%), Query Frame = 0


Query: 143 FGNKNLAVNGQLCS---NETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQK 202
           FGN N    G       N  QE+S  ++    +     S++S N  F +SG G +     
Sbjct: 22  FGNGNEGTIGDFLGRYCNNPQEISPLTLQSFSLN----SQISEN--FPISG-GIRFPPYP 81

Query: 203 GNSMANKKVMNRFSRSSTPENDDSR--EGSSVSEQITAGELGFKVNTRKRKSAHTGEAK- 262
           G   ++++     S+ +T E++ S   +  SVS+++       K N+RKRKS  +G  K 
Sbjct: 82  GQFGSDREF---GSQPTTQESNKSSLLDPDSVSDRVHT----TKSNSRKRKSIPSGNGKE 141

Query: 263 ----------NVKAAGEN-HEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPPEPPKD 322
                     N K +GEN     GK+ K ++  +      K  ++  N D++KPPE PKD
Sbjct: 142 SPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKD 201

Query: 323 YIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEI 382
           YIHVRA+RGQATDSHSLAER        RREKIS+RM  LQDLVPGCN+ITGKAVMLDEI
Sbjct: 202 YIHVRARRGQATDSHSLAERA-------RREKISERMTLLQDLVPGCNRITGKAVMLDEI 261

Query: 383 INYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSVPTFAY 442
           INYVQSLQ QVEFLSMKLATVNPRM+FN    L  ++ +   SL  ++Y +  S      
Sbjct: 262 INYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPS 321

Query: 443 EYQSM--NIPPLHSDQ---TQGGYHKMGNGIQISKFWE-DELHSVVQMGY 470
            Y S+  N+P     Q     G  H    G     FWE ++L S+VQMG+
Sbjct: 322 AYYSLGKNMPRFSDTQFPSNDGFVHTETPG-----FWENNDLQSIVQMGF 345

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BLAST of CmoCh06G016030 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-42
Identity = 149/396 (37.63%), Postives = 210/396 (53.03%), Query Frame = 0


Query: 103 YNTPLNSPPMKGNLSVGHHQNLAP-----FSADPGLAERVARFSCF--GNKNLAVNGQLC 162
           +N P   PP    L + +  +  P     F AD G  ER ARFS F  GN +  VN  L 
Sbjct: 97  WNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLG 156

Query: 163 SNETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRS 222
           ++E   L    + G G   G+                +++ V + ++  +  V     RS
Sbjct: 157 NSEAIGL---FLQGGGTMQGQCQ-------------SNELNVGEPHNDVSVAVKESTVRS 216

Query: 223 STPENDDSREGSSVSEQITA----GELGFKVNTRKRKSAHTGEAKNVKAAGENHEPNGKK 282
           S     +     +VSE   +    G+ G + ++  +K    G+ KN +AA ++H     +
Sbjct: 217 SEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQ-KNSEAA-QSHRSQQSE 276

Query: 283 IKPEM--DAAKGKAEAKDATQKQNN----DNSKPPEPPKD-YIHVRAKRGQATDSHSLAE 342
            +P+   D  +   ++ ++  K++N       +  +PPKD YIHVRA+RGQAT+SHSLAE
Sbjct: 277 EEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAE 336

Query: 343 RVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQHQVEFLSMKLA 402
           RV       RREKIS+RMKFLQDLVPGCNK+TGKAVMLDEIINYVQSLQ QVEFLSMKLA
Sbjct: 337 RV-------RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 396

Query: 403 TVNPRMDFNMETLLPKDIFK---GSSSLPHTIYPIDSSV--PTFAYEYQSMNIPPLHSDQ 462
           TVNP+MDFN+E LL KD  +   GSSS   T +P + S+  P   + +    +  +    
Sbjct: 397 TVNPQMDFNLEGLLAKDALQLRAGSSST--TPFPPNMSMAYPPLPHGFMQQTLSSIGRTI 456

Query: 463 T------QGGYHKMGNGIQISKFWEDELHSVVQMGY 470
           T       GG+ +     Q +  WE +L +V+ + Y
Sbjct: 457 TSPLSPMNGGFKR-----QETNGWEGDLQNVIHINY 460

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BLAST of CmoCh06G016030 vs. ExPASy Swiss-Prot
Match: Q9C670 (Transcription factor bHLH76 OS=Arabidopsis thaliana OX=3702 GN=BHLH76 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.4e-38
Identity = 128/351 (36.47%), Postives = 183/351 (52.14%), Query Frame = 0


Query: 123 NLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRVSS 182
           N+A F AD G  ER A+FS FG   + +N Q  S    + +   +    + SG  S++ +
Sbjct: 73  NMAQFPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQIPSG--SKLDN 132

Query: 183 NKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGFKV 242
               + S +  +  +          V      S    +DD++ G + S+       GF  
Sbjct: 133 GPLTDASKLVKERSI--------NNVSEDSQSSGGNGHDDAKCGQTSSK-------GFSS 192

Query: 243 NTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPPEP 302
             RKR                     GK  + E D  +   ++  +   + N   +P + 
Sbjct: 193 KKRKR--------------------IGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDS 252

Query: 303 PKD-YIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVM 362
            KD YIH+RA+RGQAT+SHSLAERV       RREKIS+RMKFLQDLVPGC+K+TGKAVM
Sbjct: 253 LKDGYIHMRARRGQATNSHSLAERV-------RREKISERMKFLQDLVPGCDKVTGKAVM 312

Query: 363 LDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSS-SLPHTIYPIDSSV 422
           LDEIINYVQSLQ Q+EFLSMKL+ VNP +DFN+E+LL KD  + S+ + PH +  +    
Sbjct: 313 LDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPHNMSML---Y 371

Query: 423 PTFAYEYQSMNIPPLHSDQT--QGGYHKMGNGIQISKFWEDELHSVVQMGY 470
           P  +Y  Q+  + P  S  +   GG  +     Q +  +E + H++V M +
Sbjct: 373 PPVSYLSQTGFMQPNISSMSLLSGGLKR-----QETHGYESDHHNLVHMNH 371

[Close]

BLAST of CmoCh06G016030 vs. ExPASy TrEMBL
Match: A0A6J1FDI3 (transcription factor bHLH62-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443116 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 3.2e-265
Identity = 478/485 (98.56%), Postives = 478/485 (98.56%), Query Frame = 0


Query: 1   MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS 60
           MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS
Sbjct: 1   MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS 60

Query: 61  GGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGNLSVGH 120
           GGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGNLSVGH
Sbjct: 61  GGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGNLSVGH 120

Query: 121 HQNLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRV 180
           HQNLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRV
Sbjct: 121 HQNLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRV 180

Query: 181 SSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGF 240
           SSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGF
Sbjct: 181 SSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGF 240

Query: 241 KVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPP 300
           KVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPP
Sbjct: 241 KVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPP 300

Query: 301 EPPKDYIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAV 360
           EPPKDYIHVRAKRGQATDSHSLAER       IRREKISKRMKFLQDLVPGCNKITGKAV
Sbjct: 301 EPPKDYIHVRAKRGQATDSHSLAER-------IRREKISKRMKFLQDLVPGCNKITGKAV 360

Query: 361 MLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSV 420
           MLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSV
Sbjct: 361 MLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSV 420

Query: 421 PTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQNPHGE 480
           PTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQNPHGE
Sbjct: 421 PTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQNPHGE 478

Query: 481 MKSEL 486
           MKSEL
Sbjct: 481 MKSEL 478

[Close]

BLAST of CmoCh06G016030 vs. ExPASy TrEMBL
Match: A0A6J1I462 (transcription factor bHLH62-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470804 PE=4 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.7e-255
Identity = 466/490 (95.10%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 1   MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS 60
           MEKEFFMNDGSSFYGMDSSVLFN NWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGG+
Sbjct: 1   MEKEFFMNDGSSFYGMDSSVLFNPNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGN 60

Query: 61  -----GGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGN 120
                GGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGN
Sbjct: 61  GGGGGGGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGN 120

Query: 121 LSVGHHQNLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESG 180
           LSVGH QNLAPFSADPG AER ARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESG
Sbjct: 121 LSVGHRQNLAPFSADPGFAERTARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESG 180

Query: 181 KLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITA 240
           KLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITA
Sbjct: 181 KLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITA 240

Query: 241 GELGFKVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNND 300
           GELGFKVNTRK KSA TGEAKNVKAAGENH+PNGKKIKPEMDAAKGKAEAKDATQKQNND
Sbjct: 241 GELGFKVNTRKTKSAQTGEAKNVKAAGENHKPNGKKIKPEMDAAKGKAEAKDATQKQNND 300

Query: 301 NSKPPEPPKDYIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKI 360
           NSKPPEPPKDYIHVRAKRGQATDSHSLAERV       RREKISKRMKFLQDLVPGCNKI
Sbjct: 301 NSKPPEPPKDYIHVRAKRGQATDSHSLAERV-------RREKISKRMKFLQDLVPGCNKI 360

Query: 361 TGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYP 420
           TGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYP
Sbjct: 361 TGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYP 420

Query: 421 IDSSVPTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQ 480
           IDSSVPTFAYEYQSMNIPPLHSDQTQGGYH+MGNGIQISKFWEDELHSVVQMGY QTQLQ
Sbjct: 421 IDSSVPTFAYEYQSMNIPPLHSDQTQGGYHEMGNGIQISKFWEDELHSVVQMGYGQTQLQ 480

Query: 481 NPHGEMKSEL 486
           NP  EMKSEL
Sbjct: 481 NPRDEMKSEL 483

[Close]

BLAST of CmoCh06G016030 vs. ExPASy TrEMBL
Match: A0A6J1F7S5 (transcription factor bHLH62-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443116 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 7.7e-227
Identity = 428/485 (88.25%), Postives = 428/485 (88.25%), Query Frame = 0


Query: 1   MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS 60
           MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS
Sbjct: 1   MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS 60

Query: 61  GGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGNLSVGH 120
           GGGDNLMMRELIGRLGSICSS                                       
Sbjct: 61  GGGDNLMMRELIGRLGSICSS--------------------------------------- 120

Query: 121 HQNLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRV 180
                      GLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRV
Sbjct: 121 -----------GLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRV 180

Query: 181 SSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGF 240
           SSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGF
Sbjct: 181 SSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGF 240

Query: 241 KVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPP 300
           KVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPP
Sbjct: 241 KVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPP 300

Query: 301 EPPKDYIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAV 360
           EPPKDYIHVRAKRGQATDSHSLAER       IRREKISKRMKFLQDLVPGCNKITGKAV
Sbjct: 301 EPPKDYIHVRAKRGQATDSHSLAER-------IRREKISKRMKFLQDLVPGCNKITGKAV 360

Query: 361 MLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSV 420
           MLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSV
Sbjct: 361 MLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSV 420

Query: 421 PTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQNPHGE 480
           PTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQNPHGE
Sbjct: 421 PTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQNPHGE 428

Query: 481 MKSEL 486
           MKSEL
Sbjct: 481 MKSEL 428

[Close]

BLAST of CmoCh06G016030 vs. ExPASy TrEMBL
Match: A0A6J1I970 (transcription factor bHLH62-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470804 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 5.0e-218
Identity = 417/490 (85.10%), Postives = 420/490 (85.71%), Query Frame = 0


Query: 1   MEKEFFMNDGSSFYGMDSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGS 60
           MEKEFFMNDGSSFYGMDSSVLFN NWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGG+
Sbjct: 1   MEKEFFMNDGSSFYGMDSSVLFNPNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGN 60

Query: 61  -----GGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGN 120
                GGGDNLMMRELIGRLGSICSS                                  
Sbjct: 61  GGGGGGGGDNLMMRELIGRLGSICSS---------------------------------- 120

Query: 121 LSVGHHQNLAPFSADPGLAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESG 180
                           G AER ARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESG
Sbjct: 121 ----------------GFAERTARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESG 180

Query: 181 KLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITA 240
           KLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITA
Sbjct: 181 KLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITA 240

Query: 241 GELGFKVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNND 300
           GELGFKVNTRK KSA TGEAKNVKAAGENH+PNGKKIKPEMDAAKGKAEAKDATQKQNND
Sbjct: 241 GELGFKVNTRKTKSAQTGEAKNVKAAGENHKPNGKKIKPEMDAAKGKAEAKDATQKQNND 300

Query: 301 NSKPPEPPKDYIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKI 360
           NSKPPEPPKDYIHVRAKRGQATDSHSLAERV       RREKISKRMKFLQDLVPGCNKI
Sbjct: 301 NSKPPEPPKDYIHVRAKRGQATDSHSLAERV-------RREKISKRMKFLQDLVPGCNKI 360

Query: 361 TGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYP 420
           TGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYP
Sbjct: 361 TGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYP 420

Query: 421 IDSSVPTFAYEYQSMNIPPLHSDQTQGGYHKMGNGIQISKFWEDELHSVVQMGYVQTQLQ 480
           IDSSVPTFAYEYQSMNIPPLHSDQTQGGYH+MGNGIQISKFWEDELHSVVQMGY QTQLQ
Sbjct: 421 IDSSVPTFAYEYQSMNIPPLHSDQTQGGYHEMGNGIQISKFWEDELHSVVQMGYGQTQLQ 433

Query: 481 NPHGEMKSEL 486
           NP  EMKSEL
Sbjct: 481 NPRDEMKSEL 433

[Close]

BLAST of CmoCh06G016030 vs. ExPASy TrEMBL
Match: A0A6J1CCI6 (transcription factor bHLH78-like OS=Momordica charantia OX=3673 GN=LOC111009470 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 3.7e-197
Identity = 401/560 (71.61%), Postives = 432/560 (77.14%), Query Frame = 0


Query: 1   MEKEFFMNDGSSFYGMD-------SSVLF-NSNWENSMDQSDLFESTLSSIVSSPANSHA 60
           ME+EFFMNDG +FYGM+       SS LF N+NWENSMDQSDLFESTLSSIVSSP NSHA
Sbjct: 1   MEREFFMNDGCNFYGMEIQPNELNSSGLFNNANWENSMDQSDLFESTLSSIVSSPVNSHA 60

Query: 61  GAVIGGGSGGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPP- 120
                    GGDN+MMRELIGRLGSIC+SG+ISPHSYIGGTNNNSTNTSCYNTP+NSPP 
Sbjct: 61  ---------GGDNVMMRELIGRLGSICNSGDISPHSYIGGTNNNSTNTSCYNTPMNSPPK 120

Query: 121 ----------MKGNLSVG----HHQNLAPFSADPGLAERVARFSCFGNKNL-AVNGQLCS 180
                     M+GNLSVG     HQNLAPFSADPG AER ARFSCFG++NL ++NGQ  S
Sbjct: 121 HNLSPIMESQMRGNLSVGGNLVPHQNLAPFSADPGFAERAARFSCFGSRNLGSLNGQFSS 180

Query: 181 NETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGV---------QKGNSMANKK 240
           NETQEL N+S+ G GVESGKLSRVSSNKSFN++GIGSQMGV         QKGNSM NKK
Sbjct: 181 NETQELGNRSVPGGGVESGKLSRVSSNKSFNIAGIGSQMGVVQEGNQSPMQKGNSMPNKK 240

Query: 241 VMNRFSRSSTPEN-DDSREGSSVSEQITAGELGFK----VNTRKRKSAHTGEAKNVKAAG 300
            +NRFSRSSTPEN  DSREGSSVSEQITA ELGFK     NTRKRKS HTGEAK+VKAAG
Sbjct: 241 -LNRFSRSSTPENAGDSREGSSVSEQITARELGFKGKAEANTRKRKSVHTGEAKDVKAAG 300

Query: 301 ENHEPNGKKIKP------EMDAAKGKAEAKDAT-------QKQNNDNSKPPEPPKDYIHV 360
           ENHE  GKKIKP      EMDAAKGKAEAKD T       QKQ NDNSKPPEPPKDYIHV
Sbjct: 301 ENHESTGKKIKPEEVSKKEMDAAKGKAEAKDGTKTSGDANQKQTNDNSKPPEPPKDYIHV 360

Query: 361 RAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEIINYV 420
           RA+RGQATDSHSLAERV       RREKISKRMKFLQDLVPGCNK+TGKAVMLDEIINYV
Sbjct: 361 RARRGQATDSHSLAERV-------RREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYV 420

Query: 421 QSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSVPTFAYEYQS 480
           QSLQ QVEFLSMKL+TVNPRMDFNMETLLPKDIFK   S PHT+YP DSS+PTF YEYQS
Sbjct: 421 QSLQRQVEFLSMKLSTVNPRMDFNMETLLPKDIFKCPGSAPHTVYPSDSSMPTFTYEYQS 480

Query: 481 MNIPPLH------------------------SDQTQGGYHKMGNGIQISKFWEDELHSVV 486
           M++PPLH                        S Q   GY ++GNGIQISKFWEDELH+VV
Sbjct: 481 MHMPPLHSAISNGTEKQFSVASASDAMQRNLSGQVPSGYSEVGNGIQISKFWEDELHTVV 540

[Close]

BLAST of CmoCh06G016030 vs. TAIR 10
Match: AT3G07340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 5.1e-66
Identity = 199/519 (38.34%), Postives = 265/519 (51.06%), Query Frame = 0


Query: 1   MEKEFFMNDGSSF---------------------YGMDSSVLFNSNWENSMDQSDLFEST 60
           ME E FMN G S                        +D S+  N  WE S +QS +F+S 
Sbjct: 1   MENELFMNAGVSHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQS-IFDSA 60

Query: 61  LSSIVSSPANSHAGAVIGGGSGGGDNLMMRELIGRLGSICSSGEISPHSYIGGTNNNSTN 120
           LSS+VSSP  S++   +GG   GG+N++MRELIG+LG+I   G+I      G T +N   
Sbjct: 61  LSSLVSSPTPSNSNFSVGG--VGGENVIMRELIGKLGNI---GDI-----YGITASN--G 120

Query: 121 TSCYNTPLNSPPMKGNLSVGHHQNLAPFSADPGLAERVARFSCFGNK--NLAVNGQLCSN 180
            SCY TP++SPP    +       +A  S DPG AER ARFSCFG++  N   N     N
Sbjct: 121 NSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARFSCFGSRSFNSRTNSPFPIN 180

Query: 181 ETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRSST 240
               ++            K+ RVSS+  F                            S  
Sbjct: 181 NEPPITTNE---------KMPRVSSSPVFKPLA------------------------SHV 240

Query: 241 PENDDSREGSSVSEQITAGELGFKVNTRKRKSAHTGEAKNVKAAGENHEPNGKKIKPEMD 300
           P  + S            GEL  K  T+ ++++ +  + + K   E  + + K+ K    
Sbjct: 241 PAGESS------------GELSRKRKTKSKQNSPSAVSSS-KEIEEKEDSDPKRCK---- 300

Query: 301 AAKGKAEAKDATQKQNNDNSKPPEPPKDYIHVRAKRGQATDSHSLAERVRAKALIIRREK 360
                        ++N D +K  +P KDYIHVRA+RGQATDSHSLAERV       RREK
Sbjct: 301 -----------KSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERV-------RREK 360

Query: 361 ISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPRMDFNMETL 420
           IS+RMK LQDLVPGCNK+TGKA+MLDEIINYVQSLQ QVEFLSMKL++VN R+DFNM+ L
Sbjct: 361 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDAL 420

Query: 421 LPKDIFKGSSSLPH--TIYPIDSSVPTFAYEYQSMN------------IPPLHSDQTQGG 476
           L KDIF  S++L H   +  +DSS  T   ++ + N            I PL + +T+  
Sbjct: 421 LSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNPDISSNNVINPLETSETRSF 438

[Close]

BLAST of CmoCh06G016030 vs. TAIR 10
Match: AT5G48560.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 8.5e-61
Identity = 174/397 (43.83%), Postives = 228/397 (57.43%), Query Frame = 0


Query: 17  DSSVLFNSNWENSMDQSDLFESTLSSIVSSPANSHAGAVIGGGSGGGDNLMMRELIGRLG 76
           DSS L+  + E    QS +F+S LSS+VSSP  S++        GGGD  ++RELIG+LG
Sbjct: 45  DSSFLWEKSTEQQQQQS-IFDSALSSLVSSPTPSNSNF----SGGGGDGFLIRELIGKLG 104

Query: 77  SICSSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPMKGN----LSVGHHQNLAPFSADPG 136
           +I ++   S   Y  GT   S + SCY TP++SPP   N    + +     L  FSADPG
Sbjct: 105 NIGNNNNNSGEIY--GT-PMSRSASCYATPMSSPPPPTNSNSQMMMNRTTPLTEFSADPG 164

Query: 137 LAERVARFSCFGNKNLAVNGQLCSNETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIG 196
            AER ARFSCFG+++   NG+  +N      N  +      SGKL+RVSS  +       
Sbjct: 165 FAERAARFSCFGSRSF--NGRTNTNLPINNGNNMVN----NSGKLTRVSSTPALKAL--- 224

Query: 197 SQMGVQKGNSMANKKVMNRFSRSSTPENDDSREGSSVSEQITAGELGFKVNTRKRKSAHT 256
               V  G   + K+      +  + EN  S    S S   TA + G K  ++       
Sbjct: 225 VSPEVTPGGEFSRKR--KSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSK------- 284

Query: 257 GEAKNVKAAGENHEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPPEPPKDYIHVRAK 316
                      + E  GK+ + E D  + + E     +   ++N+KPPEPPKDYIHVRA+
Sbjct: 285 ----------SSEEKGGKRRREEEDDEEEEGEG----EGNKSNNTKPPEPPKDYIHVRAR 344

Query: 317 RGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSL 376
           RGQATDSHSLAERV       RREKI +RMK LQDLVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 345 RGQATDSHSLAERV-------RREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 394

Query: 377 QHQVEFLSMKLATVN-PRMDFNMETLLPKDIFKGSSS 409
           Q QVEFLSMKL++VN  R+DFN++ L+ KD+   SS+
Sbjct: 405 QRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSN 394

[Close]

BLAST of CmoCh06G016030 vs. TAIR 10
Match: AT3G23690.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-46
Identity = 146/350 (41.71%), Postives = 193/350 (55.14%), Query Frame = 0


Query: 143 FGNKNLAVNGQLCS---NETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQK 202
           FGN N    G       N  QE+S  ++    +     S++S N  F +SG G +     
Sbjct: 22  FGNGNEGTIGDFLGRYCNNPQEISPLTLQSFSLN----SQISEN--FPISG-GIRFPPYP 81

Query: 203 GNSMANKKVMNRFSRSSTPENDDSR--EGSSVSEQITAGELGFKVNTRKRKSAHTGEAK- 262
           G   ++++     S+ +T E++ S   +  SVS+++       K N+RKRKS  +G  K 
Sbjct: 82  GQFGSDREF---GSQPTTQESNKSSLLDPDSVSDRVHT----TKSNSRKRKSIPSGNGKE 141

Query: 263 ----------NVKAAGEN-HEPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPPEPPKD 322
                     N K +GEN     GK+ K ++  +      K  ++  N D++KPPE PKD
Sbjct: 142 SPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKD 201

Query: 323 YIHVRAKRGQATDSHSLAERVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEI 382
           YIHVRA+RGQATDSHSLAER        RREKIS+RM  LQDLVPGCN+ITGKAVMLDEI
Sbjct: 202 YIHVRARRGQATDSHSLAERA-------RREKISERMTLLQDLVPGCNRITGKAVMLDEI 261

Query: 383 INYVQSLQHQVEFLSMKLATVNPRMDFNMETLLPKDIFKGSSSLPHTIYPIDSSVPTFAY 442
           INYVQSLQ QVEFLSMKLATVNPRM+FN    L  ++ +   SL  ++Y +  S      
Sbjct: 262 INYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPS 321

Query: 443 EYQSM--NIPPLHSDQ---TQGGYHKMGNGIQISKFWE-DELHSVVQMGY 470
            Y S+  N+P     Q     G  H    G     FWE ++L S+VQMG+
Sbjct: 322 AYYSLGKNMPRFSDTQFPSNDGFVHTETPG-----FWENNDLQSIVQMGF 345

[Close]

BLAST of CmoCh06G016030 vs. TAIR 10
Match: AT1G68920.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 9.4e-44
Identity = 148/396 (37.37%), Postives = 209/396 (52.78%), Query Frame = 0


Query: 103 YNTPLNSPPMKGNLSVGHHQNLAP-----FSADPGLAERVARFSCF--GNKNLAVNGQLC 162
           +N P   PP    L + +  +  P     F AD G  ER ARFS F  GN +  VN  L 
Sbjct: 97  WNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLG 156

Query: 163 SNETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRS 222
           ++E   L    + G G   G+                +++ V + ++  +  V     RS
Sbjct: 157 NSEAIGL---FLQGGGTMQGQCQ-------------SNELNVGEPHNDVSVAVKESTVRS 216

Query: 223 STPENDDSREGSSVSEQITA----GELGFKV--NTRKRK----SAHTGEAKNVKAAGENH 282
           S     +     +VSE   +    G+ G +   NT+KRK    ++   ++   + + E  
Sbjct: 217 SEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQNSEAAQSHRSQQSEEEP 276

Query: 283 EPNGKKIKPEMDAAKGKAEAKDATQKQNNDNSKPPEPPKD-YIHVRAKRGQATDSHSLAE 342
           + NG + + +  +     +  ++ ++Q   +S   +PPKD YIHVRA+RGQAT+SHSLAE
Sbjct: 277 DNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSS---DPPKDGYIHVRARRGQATNSHSLAE 336

Query: 343 RVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQHQVEFLSMKLA 402
           RV       RREKIS+RMKFLQDLVPGCNK+TGKAVMLDEIINYVQSLQ QVEFLSMKLA
Sbjct: 337 RV-------RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 396

Query: 403 TVNPRMDFNMETLLPKDIFK---GSSSLPHTIYPIDSSV--PTFAYEYQSMNIPPLHSDQ 462
           TVNP+MDFN+E LL KD  +   GSSS   T +P + S+  P   + +    +  +    
Sbjct: 397 TVNPQMDFNLEGLLAKDALQLRAGSSST--TPFPPNMSMAYPPLPHGFMQQTLSSIGRTI 456

Query: 463 T------QGGYHKMGNGIQISKFWEDELHSVVQMGY 470
           T       GG+ +     Q +  WE +L +V+ + Y
Sbjct: 457 TSPLSPMNGGFKR-----QETNGWEGDLQNVIHINY 459

[Close]

BLAST of CmoCh06G016030 vs. TAIR 10
Match: AT1G68920.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-43
Identity = 149/396 (37.63%), Postives = 210/396 (53.03%), Query Frame = 0


Query: 103 YNTPLNSPPMKGNLSVGHHQNLAP-----FSADPGLAERVARFSCF--GNKNLAVNGQLC 162
           +N P   PP    L + +  +  P     F AD G  ER ARFS F  GN +  VN  L 
Sbjct: 97  WNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLG 156

Query: 163 SNETQELSNKSMAGAGVESGKLSRVSSNKSFNVSGIGSQMGVQKGNSMANKKVMNRFSRS 222
           ++E   L    + G G   G+                +++ V + ++  +  V     RS
Sbjct: 157 NSEAIGL---FLQGGGTMQGQCQ-------------SNELNVGEPHNDVSVAVKESTVRS 216

Query: 223 STPENDDSREGSSVSEQITA----GELGFKVNTRKRKSAHTGEAKNVKAAGENHEPNGKK 282
           S     +     +VSE   +    G+ G + ++  +K    G+ KN +AA ++H     +
Sbjct: 217 SEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQ-KNSEAA-QSHRSQQSE 276

Query: 283 IKPEM--DAAKGKAEAKDATQKQNN----DNSKPPEPPKD-YIHVRAKRGQATDSHSLAE 342
            +P+   D  +   ++ ++  K++N       +  +PPKD YIHVRA+RGQAT+SHSLAE
Sbjct: 277 EEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAE 336

Query: 343 RVRAKALIIRREKISKRMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQHQVEFLSMKLA 402
           RV       RREKIS+RMKFLQDLVPGCNK+TGKAVMLDEIINYVQSLQ QVEFLSMKLA
Sbjct: 337 RV-------RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 396

Query: 403 TVNPRMDFNMETLLPKDIFK---GSSSLPHTIYPIDSSV--PTFAYEYQSMNIPPLHSDQ 462
           TVNP+MDFN+E LL KD  +   GSSS   T +P + S+  P   + +    +  +    
Sbjct: 397 TVNPQMDFNLEGLLAKDALQLRAGSSST--TPFPPNMSMAYPPLPHGFMQQTLSSIGRTI 456

Query: 463 T------QGGYHKMGNGIQISKFWEDELHSVVQMGY 470
           T       GG+ +     Q +  WE +L +V+ + Y
Sbjct: 457 TSPLSPMNGGFKR-----QETNGWEGDLQNVIHINY 460

The following BLAST results are available for this feature:

BLAST of CmoCh06G016030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRT2	7.2e-65	38.34	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q9FJL4	1.2e-59	43.83	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]
Q9LK48	6.4e-45	41.71	Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1	[more]
Q9CAA9	1.7e-42	37.63	Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1	[more]
Q9C670	3.4e-38	36.47	Transcription factor bHLH76 OS=Arabidopsis thaliana OX=3702 GN=BHLH76 PE=1 SV=1	[more]

BLAST of CmoCh06G016030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDI3	3.2e-265	98.56	transcription factor bHLH62-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1I462	1.7e-255	95.10	transcription factor bHLH62-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1F7S5	7.7e-227	88.25	transcription factor bHLH62-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1I970	5.0e-218	85.10	transcription factor bHLH62-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1CCI6	3.7e-197	71.61	transcription factor bHLH78-like OS=Momordica charantia OX=3673 GN=LOC111009470 ...	[more]

BLAST of CmoCh06G016030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07340.1	5.1e-66	38.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G48560.1	8.5e-61	43.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G23690.1	4.5e-46	41.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.3	9.4e-44	37.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.1	1.2e-43	37.63	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 325..378 e-value: 2.9E-4 score: 30.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 322..372 score: 11.223235
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 312..393 e-value: 2.7E-10 score: 42.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 313..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..306
None	No IPR available	PANTHER	PTHR12565:SF336	BHLH TRANSCRIPTION FACTOR	coord: 21..428
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 305..397 e-value: 5.2636E-61 score: 192.272
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 21..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G016030.1	CmoCh06G016030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity