CmoCh06G015860 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGTACCTAATTTTCTTCACAGAGATTAAACACAATTTCACAATTAATCGTTCCAATGGCTTCAATACGAGTTCGCCGGCGCCGGATAATTCTCCCGGCGGTGGCGGTGGCAGTGGTGGTGCTGGTTTTTATGGTGAGTTTTGGCCGGAGCGGGAGCGTGGGACACATGCCGTCGACGGAGGAGGAGGGTCGAGATTACCAGGAAATGAAGAGAAAGATGGCGGCGAAAGAAGAAACGGAAAAAGACCGGTCGTCGGAGACTTGGACGGAATGGGCAAAAAAGAAGATCTCCGGTGGACTTGGACTGAGAAATGAACTCCGGGAAGACGGCGTTAACAAAATCGAGAATGTCGTCTCAGGTTCTGGTTTTTCCGGTGCCCAAAGTTTATTAAATTAATAAAAATACCTCTTAATATATTTTTAAAACTTTTAAATTTAAAAAATTAAAATATATATCTCTTAATATATATTTTTTAAAATTAAGTAATACCTGGATGGAATGGTTAATATTAATATCATGTTTCAAGATATAAATTTTATAAATATTTTTTTTATTAATTTAATGTATTGATTTTTATTGAAATTACTTTTTTTCATGATTAAATTATTGGAAAATCTCTTATAAATGAATTAAAAATTGATAAATAAAATTATTCTTAACAACAGAGGCGGGACAATATGGGGCTGAGAAGGGCAGAGAAGCGGAGGACATGGCGGCGGAGAAGGCAGCAGAAACGGCGGAGGAGATGAAGGCGAAGGGGAAGGCGGCGGAGGAGACGACGGAGAAAGGGTTTGTGGCGGGAAAGAAGAAGTCGGAGAGGATAAAAGACGACGTGGTTGGGTCGGAGGACGAGCTGTAATTGAGAAATTTATAATGTAATTTTCTAATTTTTATTTTTAAAATAAATAGTTAAAAATAAAACAAATTTGTTAAATATAAAATTAAAAATTAAGAAAGTTTTTAAAAGTTAATGACACATAAGATAGTATATTAAAGAGATCA CCGGTACCTAATTTTCTTCACAGAGATTAAACACAATTTCACAATTAATCGTTCCAATGGCTTCAATACGAGTTCGCCGGCGCCGGATAATTCTCCCGGCGGTGGCGGTGGCAGTGGTGGTGCTGGTTTTTATGGTGAGTTTTGGCCGGAGCGGGAGCGTGGGACACATGCCGTCGACGGAGGAGGAGGGTCGAGATTACCAGGAAATGAAGAGAAAGATGGCGGCGAAAGAAGAAACGGAAAAAGACCGGTCGTCGGAGACTTGGACGGAATGGGCAAAAAAGAAGATCTCCGGTGGACTTGGACTGAGAAATGAACTCCGGGAAGACGGCGTTAACAAAATCGAGAATGTCGTCTCAGAGGCGGGACAATATGGGGCTGAGAAGGGCAGAGAAGCGGAGGACATGGCGGCGGAGAAGGCAGCAGAAACGGCGGAGGAGATGAAGGCGAAGGGGAAGGCGGCGGAGGAGACGACGGAGAAAGGGTTTGTGGCGGGAAAGAAGAAGTCGGAGAGGATAAAAGACGACGTGGTTGGGTCGGAGGACGAGCTGTAATTGAGAAATTTATAATGTAATTTTCTAATTTTTATTTTTAAAATAAATAGTTAAAAATAAAACAAATTTGTTAAATATAAAATTAAAAATTAAGAAAGTTTTTAAAAGTTAATGACACATAAGATAGTATATTAAAGAGATCA ATGGCTTCAATACGAGTTCGCCGGCGCCGGATAATTCTCCCGGCGGTGGCGGTGGCAGTGGTGGTGCTGGTTTTTATGGTGAGTTTTGGCCGGAGCGGGAGCGTGGGACACATGCCGTCGACGGAGGAGGAGGGTCGAGATTACCAGGAAATGAAGAGAAAGATGGCGGCGAAAGAAGAAACGGAAAAAGACCGGTCGTCGGAGACTTGGACGGAATGGGCAAAAAAGAAGATCTCCGGTGGACTTGGACTGAGAAATGAACTCCGGGAAGACGGCGTTAACAAAATCGAGAATGTCGTCTCAGAGGCGGGACAATATGGGGCTGAGAAGGGCAGAGAAGCGGAGGACATGGCGGCGGAGAAGGCAGCAGAAACGGCGGAGGAGATGAAGGCGAAGGGGAAGGCGGCGGAGGAGACGACGGAGAAAGGGTTTGTGGCGGGAAAGAAGAAGTCGGAGAGGATAAAAGACGACGTGGTTGGGTCGGAGGACGAGCTGTAA MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL Homology
BLAST of CmoCh06G015860 vs. ExPASy Swiss-Prot
Match: P13940 (Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum OX=3635 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.4e-06 Identity = 58/204 (28.43%), Postives = 92/204 (45.10%), Query Frame = 0
BLAST of CmoCh06G015860 vs. ExPASy TrEMBL
Match: A0A6J1G1V4 (late embryogenesis abundant protein D-29-like OS=Cucurbita moschata OX=3662 GN=LOC111449927 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.8e-77 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of CmoCh06G015860 vs. ExPASy TrEMBL
Match: A0A6J1I8U6 (late embryogenesis abundant protein D-29-like OS=Cucurbita maxima OX=3661 GN=LOC111470719 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.4e-42 Identity = 125/203 (61.58%), Postives = 140/203 (68.97%), Query Frame = 0
BLAST of CmoCh06G015860 vs. ExPASy TrEMBL
Match: A0A5D3BZE2 (Late embryogenesis abundant protein D-29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00170 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.9e-29 Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0
BLAST of CmoCh06G015860 vs. ExPASy TrEMBL
Match: A0A5A7UA73 (Late embryogenesis abundant protein D-29 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1589G00180 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.9e-29 Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0
BLAST of CmoCh06G015860 vs. ExPASy TrEMBL
Match: E5GC45 (Late embryogenesis abundant protein D-29 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.9e-29 Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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