CmoCh06G015820 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G015820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	50S ribosomal protein l3
Location	Cmo_Chr06: 11110765 .. 11114618 (-)
RNA-Seq Expression	CmoCh06G015820
Synteny	CmoCh06G015820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGAGTGGTCACCTTGCTTGCTGCCGCTCTCCCTCCATTACACTGCGTACAGAGAGAGAGAGAATGAAATTCCAGTGTCTCCGAGATCGGAATCTACTCTGAAACTGAGCCAAAGCTTTCCATTTTCTCTCTTGCATCTCCCCGTCTAAGCAATCTTTGCGAGTGTTCTTCACCATGTCGGCTTTATCCAGAGGTCTCATTTCTCGTTTTCGTCTTCTGTCGATCAATTCCGCCGCTTCACCGACAATTACTTCTTCTTCTTCTTCTTCTTCTTCATGGACGCATCCGTCTTGTTATTTCTTCTTCCGTACTTTCAGTACCGAGGGTTCGATTCAGGCTGGCGATGGCTCTTCGCTTTCTTCTCCGATTATTGAAGCTAAACCTGGTGTTATGAGCCCTAACTCGAAGCGTACGGGAGTCATTGCTGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGGTACCCATCACTGTGCTCTGGGTTGATGATAATATTGTATCTCAGGTCAAGACTATTGAGAAAGAAGGCATCACAGCTCTCCAGGTACTGTTTAAATATCTTCTTCTCGTTTTCATTTCTGTCAGCGGAGTAGTTTTTGTTTATTATTCTTGTGAGCACTGCTTAGATGAAATTAGGAAGGGGACATTGTTGGCTCTGGTAGTCTTGGTTTCTGAATGGCATGGGATTTTGGCTTAATGATGCCGAGGAGTACATCTTTGGAATACTATTTGCTATGTTACTCTCTCTGTGAGAGGGATTTGAAGCTGTTACTCTGTTACTCCTACCCTTTCAATTCCATGGATTCTGGAACTATACTGAATTGAGCTGCACACTGTTGTTTTGGATCAGCATTTCACCTATGAAAGATATTCAGTTATCAGAATAGAAGTTGAACAGGGTATTTATGTACGTTCTGTCTTTCATATGGAAATCAGAGGCCAATGGGCCATTCCCTTTACTCGTACCGATCAGAATCTGACCTCACAAGAAATTGAGCAAAAGACTGCCGAATTGGCCTATTTCTTGCGTGTACCCATTGAAGTTTTTTGAAAAATGAAGTTCAGAATGAATGCTTTCTTAGTTCGTAGCAAGAGGTATATAACTGAAATGAAAGAATAATCCTTTTAATAGACAATAGTAATAGTATAACTTAACGGGAGTTTCTTCAGAATGCTCATTTGAGACAAAGCAGACGAATACGGATTAGACAGAAAACTGTCTTGGTCCGAAATTTTGTGGCTTCCATTGTTACACTTAACTAGATGTGATTATATGACCTTTTTGTTCTTAATAACTGGGTTATCGAGGTTCAAATTCTCGTATCAAACTCATTGCCTACCTCCCTAATATTTGGGAAGCAACAAGAGTTTTGATTATTACTTACACTTACCATTGTTGATTTCACCATTTCTAAGGGGAAAAAAAGTTGTCTTGACCGTTAGACCATATGTATGAGATCTCTTTTTTCAGTTCTTACAAATTTTATGGCATAGGACTTGCATTTATTGACCAAATGTGCTATGCTATGGTGCTAGTTAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCCGAGGTAGGTCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTTCCAGTGACAGAAGACGCCCTTCTTCCAGTTGGTACGACAATTGGTGTTCGTCATTTTGTCCCTGGACAGTTTATTGATGTGACAGGAATAACAAGAGGGAAAGGTTTCCAGGTGAGTCCATTGCAGCATTCCTTCATTAATTTTTTAGCTCACAGCCTCTACTCCTATTAGGTTTCTTTCATTCCCTTGTATTTGTTAATATGGTTAAGTTAATTACATATTCAAAACACATGAATGTTATTGTGGGAACATAAATGGTTAAGTTAATTGCATATTCAAGCAAATATTTTCAATAAACACCGTAACCCAACTCTAATATTTTACCATGATTTACCTAACTCGAACTTGTTTTGTTTGGCTTGAATGCTTAATTATCTAACATTCTGCATGATCTGCGGGGTGAAATTTGAACATCAAAGTCACAGTGCTGTACATGTGTATGTTATCACAAGACAATACGGACAATTTCTCGATGAGATCACGTGCATCCTCAAGATGACAAGAATTAAAACAATCACACAATTCATATATATAAGTATAAACACGAAAAATATTAAGGGCTCTATACAAACCCTAGGAGAAACTTGTGTAGCTGATAACTTATGTTGATCTTTGATCTTTGCTTTGTTTCTGTTTTTCATGTTTTTGCTAATCTGGTTGTATGTTTGTGTTCTAGACATAAAAAAGCTGTTTTCTTTCCATGTGTAAATGGTATAATATCTTTTCCATAAAATGATGTCTCTTATGGCTAATCTTTTTTCTTATTGTTCACAGGGAGTGATGAAAAAGCATGGATTTAAAGGAATGCCAGCATCCCACGGAGCATCATTATCCCACAGAAGCCTCGGTTCTACAGGTCAGAGGGATGCTCCTGGGAAGGTGTGTTTATCTTTTCATGGTGACACTCATTTTTAAGATTGAGTGGTTATTTCAGTTCTCAAATGCATTTTAAGGCTACCCAAAACTCACATCTGGTTGAAACTCGAGCATTGAAGATATCCGCGTAGTAGTAGGGTAATATATCGTGCTAGCCTACTTCGACATAGGACTTTGATTCTGTCTCCTTCGTTTCCTGTCAATGTGCAAGGTTCTTTCTCAATGAATGGAGATTTTAGAGAATAGAAACAAGAATTTGATGGGACTAAACAAAAAGGAATAACTTGCACGGTAAAAGGACGTTTTCTGGATTTATCTATGCTTGTGCAATGAATCAATATCGAGTAATTACTATATTGTAATAGAACAAGCTTGAATTGTTTTTTTAATACCAACTTTATCTGCAGTAGAATTACTATGTTGTAATAGAACACGCTTTGGTTTAGTCTGATTTATTTCTTGAATCGTTTTTATGGTCTGTTATGTTGCGAGTTCTACTCCGTTTTCTCTGTATGCCATGTCGTATACGACTGAGAAACGTGTTCTTATTTTCCAGGTTTTTAAAGGTAAGAAGATGGCTGGTCGTATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGGTCTACAAAATTGATCCTGCAAGAAACTTGATGTGGGTTAGAGGACAAGTAAGTTTCTTTCAATTTACACATAAATATGACACTCTTGCGACATTGTGATCTGAGATTATTTGCTGCACAAACTTCACCTTTCAGGTCCCGGGCGCCGAAGGAAACTTTGTATTTATAAAAGACGCCTTCTACAAGAAACCCGACAAGTCGATCCTTCCATTCCCTACCTACTTTGCGAACAACGACGAGGACACAGAGACGTTGGAACCTCTCGTTGCTGATCTTGGAGAAGTAGATCCATTCATGGTTGGAGAATGATAGGGAGTTGGGCTTTTCAGTGCAAGTTCTTCGATTTCGCTCTGTTTTTTTCGATCTTTTCAGCTACTGATGACCCTTTTTCGAGTAGAAACGCAGCTGGAGGTTCTGTATGAGGCAATCCAATCTCCTTATACGATGGGAATTTACCATTTACTTTTCTTTCAACTCAAAACTTGTACCGGAAAATGCCATTTTGAAATAAAGGATAGAGAAAAAAGCTATGATTATTGAGGTTTTTTGTTGATGTTTATGTGAACTTGGAGAAAGAGATTGTTTATGGCTGCCCTAGCCTCTCTTCATTTGAACTCATTTTCATCTTCTACTCTCTGAAATTTCAACTCTAGATTCTTAAAATTTTGTTGAAATTCCTCAACCCCACCTTAAATTCTGTTAACC

mRNA sequence

CCCGAGTGGTCACCTTGCTTGCTGCCGCTCTCCCTCCATTACACTGCGTACAGAGAGAGAGAGAATGAAATTCCAGTGTCTCCGAGATCGGAATCTACTCTGAAACTGAGCCAAAGCTTTCCATTTTCTCTCTTGCATCTCCCCGTCTAAGCAATCTTTGCGAGTGTTCTTCACCATGTCGGCTTTATCCAGAGGTCTCATTTCTCGTTTTCGTCTTCTGTCGATCAATTCCGCCGCTTCACCGACAATTACTTCTTCTTCTTCTTCTTCTTCTTCATGGACGCATCCGTCTTGTTATTTCTTCTTCCGTACTTTCAGTACCGAGGGTTCGATTCAGGCTGGCGATGGCTCTTCGCTTTCTTCTCCGATTATTGAAGCTAAACCTGGTGTTATGAGCCCTAACTCGAAGCGTACGGGAGTCATTGCTGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGGTACCCATCACTGTGCTCTGGGTTGATGATAATATTGTATCTCAGGTCAAGACTATTGAGAAAGAAGGCATCACAGCTCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCCGAGGTAGGTCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTTCCAGTGACAGAAGACGCCCTTCTTCCAGTTGGTACGACAATTGGTGTTCGTCATTTTGTCCCTGGACAGTTTATTGATGTGACAGGAATAACAAGAGGGAAAGGTTTCCAGGGAGTGATGAAAAAGCATGGATTTAAAGGAATGCCAGCATCCCACGGAGCATCATTATCCCACAGAAGCCTCGGTTCTACAGGTCAGAGGGATGCTCCTGGGAAGGTTTTTAAAGGTAAGAAGATGGCTGGTCGTATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGGTCTACAAAATTGATCCTGCAAGAAACTTGATGTGGGTTAGAGGACAAGTCCCGGGCGCCGAAGGAAACTTTGTATTTATAAAAGACGCCTTCTACAAGAAACCCGACAAGTCGATCCTTCCATTCCCTACCTACTTTGCGAACAACGACGAGGACACAGAGACGTTGGAACCTCTCGTTGCTGATCTTGGAGAAGTAGATCCATTCATGGTTGGAGAATGATAGGGAGTTGGGCTTTTCAGTGCAAGTTCTTCGATTTCGCTCTGTTTTTTTCGATCTTTTCAGCTACTGATGACCCTTTTTCGAGTAGAAACGCAGCTGGAGGTTCTGTATGAGGCAATCCAATCTCCTTATACGATGGGAATTTACCATTTACTTTTCTTTCAACTCAAAACTTGTACCGGAAAATGCCATTTTGAAATAAAGGATAGAGAAAAAAGCTATGATTATTGAGGTTTTTTGTTGATGTTTATGTGAACTTGGAGAAAGAGATTGTTTATGGCTGCCCTAGCCTCTCTTCATTTGAACTCATTTTCATCTTCTACTCTCTGAAATTTCAACTCTAGATTCTTAAAATTTTGTTGAAATTCCTCAACCCCACCTTAAATTCTGTTAACC

Coding sequence (CDS)

ATGTCGGCTTTATCCAGAGGTCTCATTTCTCGTTTTCGTCTTCTGTCGATCAATTCCGCCGCTTCACCGACAATTACTTCTTCTTCTTCTTCTTCTTCTTCATGGACGCATCCGTCTTGTTATTTCTTCTTCCGTACTTTCAGTACCGAGGGTTCGATTCAGGCTGGCGATGGCTCTTCGCTTTCTTCTCCGATTATTGAAGCTAAACCTGGTGTTATGAGCCCTAACTCGAAGCGTACGGGAGTCATTGCTGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGGTACCCATCACTGTGCTCTGGGTTGATGATAATATTGTATCTCAGGTCAAGACTATTGAGAAAGAAGGCATCACAGCTCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCCGAGGTAGGTCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTTCCAGTGACAGAAGACGCCCTTCTTCCAGTTGGTACGACAATTGGTGTTCGTCATTTTGTCCCTGGACAGTTTATTGATGTGACAGGAATAACAAGAGGGAAAGGTTTCCAGGGAGTGATGAAAAAGCATGGATTTAAAGGAATGCCAGCATCCCACGGAGCATCATTATCCCACAGAAGCCTCGGTTCTACAGGTCAGAGGGATGCTCCTGGGAAGGTTTTTAAAGGTAAGAAGATGGCTGGTCGTATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGGTCTACAAAATTGATCCTGCAAGAAACTTGATGTGGGTTAGAGGACAAGTCCCGGGCGCCGAAGGAAACTTTGTATTTATAAAAGACGCCTTCTACAAGAAACCCGACAAGTCGATCCTTCCATTCCCTACCTACTTTGCGAACAACGACGAGGACACAGAGACGTTGGAACCTCTCGTTGCTGATCTTGGAGAAGTAGATCCATTCATGGTTGGAGAATGA

Protein sequence

MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSSLSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMAGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFANNDEDTETLEPLVADLGEVDPFMVGE

Homology

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BLAST of CmoCh06G015820 vs. ExPASy Swiss-Prot
Match: Q9LRN8 (50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL3B PE=1 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 5.3e-136
Identity = 248/331 (74.92%), Postives = 274/331 (82.78%), Query Frame = 0


Query: 1   MSALSRGLISRF-RLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGS 60
           M+A+ RGL+SR  + LSI S        + SSS S  H S +F  R FS++  +  G GS
Sbjct: 1   MAAVPRGLLSRINQFLSIRSI-------TPSSSESLPHCSSFFLIRRFSSDTGLMDGGGS 60

Query: 61  SL---SSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVK 120
            +    + IIEAK G MS  SKRTG+IAVKCGM+ALWDKWG R+PI++LWVDDNIVSQVK
Sbjct: 61  DIIGAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVK 120

Query: 121 TIEKEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGV 180
           T+EKEGI ALQIGCGQKK KHL+K  VGHFRAQGVPLKRKLREFPVTEDALLPVGT++GV
Sbjct: 121 TVEKEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGV 180

Query: 181 RHFVPGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKG 240
           RHFVPGQ++DVTGITRGKGFQG MK+HGF GMPASHGASLSHRS GSTGQRDAPGKVFKG
Sbjct: 181 RHFVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKG 240

Query: 241 KKMAGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPF 300
           +KMAGRMG  QRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDA+ KKPD S LPF
Sbjct: 241 RKMAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPF 300

Query: 301 PTYFANNDEDTETLEPLVADLGEVDPFMVGE 328
           PTY A  DED   LEPLVADLGEVDPFM+ E
Sbjct: 301 PTYLAPEDEDPSELEPLVADLGEVDPFMLAE 324

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BLAST of CmoCh06G015820 vs. ExPASy Swiss-Prot
Match: Q5NQ64 (50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rplC PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-57
Identity = 117/228 (51.32%), Postives = 156/228 (68.42%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 138
           RTGVIA K GM+ L+ + G  VP+TVL ++D  V  VK  +++G  A+Q+G G  KAK++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKNV 61

Query: 139 TKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQFIDVTGITRGKGFQG 198
           TKP  GHF    V LK KL EFPV+EDA+L VGT+I   HF+ GQ +D++G T+GKGF G
Sbjct: 62  TKPVRGHFAKAEVELKAKLVEFPVSEDAVLEVGTSISADHFIAGQLVDISGQTQGKGFAG 121

Query: 199 VMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMAGRMGGKQRTVKNVWVYKI 258
            MK+ GF G+ A+HG SLSHRS GSTG R  PG+VFK KKMAG MG +QRT +N+ V   
Sbjct: 122 AMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVIST 181

Query: 259 DPARNLMWVRGQVPGAEGNFVFIKDAF-YKKPDKSILPFPTYFANNDE 306
           D  R+L++VRG VPG++G ++ I+DA    +P  +  P     AN +E
Sbjct: 182 DAERDLIFVRGSVPGSKGAWLIIRDAVKVARPTDAPYPAAIKAANGNE 229

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BLAST of CmoCh06G015820 vs. ExPASy Swiss-Prot
Match: Q2G8Y0 (50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplC PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.9e-57
Identity = 108/206 (52.43%), Postives = 149/206 (72.33%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 138
           RTGVIA K GM+ L+ + G  VP+TVL +++  V  V+T E++G  ALQ+G G+ K K++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKNV 61

Query: 139 TKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQFIDVTGITRGKGFQG 198
            KP+  HF    VPLK ++ EF V +DALL VG+TI   HFVPGQ++D+TG T+GKGFQG
Sbjct: 62  AKPQREHFAKAEVPLKMEVAEFRVADDALLDVGSTIAASHFVPGQYVDITGQTQGKGFQG 121

Query: 199 VMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMAGRMGGKQRTVKNVWVYKI 258
            MK+ GF GM A+HG S+SHR+ GSTG R  PG+VFK KKMAG MG +QRT +N+ V + 
Sbjct: 122 AMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVVRT 181

Query: 259 DPARNLMWVRGQVPGAEGNFVFIKDA 285
           D  R L++V+G VPG++  ++ ++DA
Sbjct: 182 DDERGLIFVKGSVPGSKNAWLLVRDA 207

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BLAST of CmoCh06G015820 vs. ExPASy Swiss-Prot
Match: Q5FTY3 (50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rplC PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.3e-57
Identity = 115/219 (52.51%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 138
           RTG+IA K GM+ L+ + G  VP+TVL +D+  V   +T E++G TA+Q+G G  K K++
Sbjct: 2   RTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKNV 61

Query: 139 TKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQFIDVTGITRGKGFQG 198
           TK   GHF    V  KR L EF V+EDALL  GT +   HFV GQ +DVTG ++GKGF G
Sbjct: 62  TKANRGHFARTKVEPKRHLAEFRVSEDALLEAGTKLSAAHFVVGQKVDVTGQSKGKGFAG 121

Query: 199 VMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMAGRMGGKQRTVKNVWVYKI 258
           VMK+H F G+ ASHG S+SHRS GSTGQR  PGKVFKGKKMAG MG ++ T  N+ +  +
Sbjct: 122 VMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIAAV 181

Query: 259 DPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFP 298
           D  RNL+ VRG +PGA+   V I+DA  KK   +  P+P
Sbjct: 182 DEERNLIMVRGAIPGAKNGLVLIRDAI-KKARHADAPYP 219

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BLAST of CmoCh06G015820 vs. ExPASy Swiss-Prot
Match: Q5LLU6 (50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rplC PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.0e-55
Identity = 112/219 (51.14%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 138
           R+G+IA K GM+ L+ + G ++P+TVL +D+  V   +T EK+G TA+Q+G G  K K +
Sbjct: 2   RSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKRV 61

Query: 139 TKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQFIDVTGITRGKGFQG 198
           +K   GHF AQ V  KRKL EF V+EDAL+ VG  I   HF+ GQ +DV+G + GKGF G
Sbjct: 62  SKAMRGHFAAQKVEPKRKLAEFRVSEDALIEVGAEISAEHFLTGQKVDVSGTSIGKGFAG 121

Query: 199 VMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMAGRMGGKQRTVKNVWVYKI 258
            MK+H F G+ ASHG S+SHRS GSTGQ   PG+VFKGKKMAG MG  + T +N+ V K 
Sbjct: 122 AMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVVKT 181

Query: 259 DPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFP 298
           D  R L++++G VPG +  +V +KDA  KK  +  LPFP
Sbjct: 182 DAERGLVFIKGAVPGPKSGWVTVKDAVKKKAPEG-LPFP 219

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BLAST of CmoCh06G015820 vs. ExPASy TrEMBL
Match: A0A6J1G5I5 (50S ribosomal protein L3-2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451076 PE=3 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.1e-184
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60
           MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS
Sbjct: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60

Query: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120
           LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK
Sbjct: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180
           EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180

Query: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240
           PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA
Sbjct: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300
           GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300

Query: 301 ANNDEDTETLEPLVADLGEVDPFMVGE 328
           ANNDEDTETLEPLVADLGEVDPFMVGE
Sbjct: 301 ANNDEDTETLEPLVADLGEVDPFMVGE 327

[Close]

BLAST of CmoCh06G015820 vs. ExPASy TrEMBL
Match: A0A6J1I7Y9 (50S ribosomal protein L3-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470821 PE=3 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 6.8e-179
Identity = 318/327 (97.25%), Postives = 323/327 (98.78%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60
           MSALSRGLISRFRLLSINS ASPTIT SSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS
Sbjct: 1   MSALSRGLISRFRLLSINSGASPTIT-SSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60

Query: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120
           LSSPIIEAK GVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK
Sbjct: 61  LSSPIIEAKSGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180
           EGITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPV+EDALLPVGTTIGVRHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSEDALLPVGTTIGVRHFV 180

Query: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240
           PGQF+DVTGITRGKGFQGVMK+HGFKGMPASHGASLSHRS GSTGQRDAPGKVFKGKKMA
Sbjct: 181 PGQFVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300
           GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300

Query: 301 ANNDEDTETLEPLVADLGEVDPFMVGE 328
           AN+DEDTETLEPLVADLGEVDPFMVGE
Sbjct: 301 ANDDEDTETLEPLVADLGEVDPFMVGE 326

[Close]

BLAST of CmoCh06G015820 vs. ExPASy TrEMBL
Match: A0A6J1CAF7 (50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009440 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.3e-165
Identity = 294/327 (89.91%), Postives = 309/327 (94.50%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60
           MSALSRGL+SRFRLLSINS AS TI    S SSS THPSCY+FFR+FS+E  IQAGD SS
Sbjct: 1   MSALSRGLVSRFRLLSINSGASSTI----SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60

Query: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120
            SSPIIEAKPGVM+PNSKRTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEK
Sbjct: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180
           EGITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPV+ DALLPVGTTIGVRHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180

Query: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240
           PGQ++DVTGITRGKGFQGVMK+HGFKGMPASHGASLSHRS GSTGQRDAPGKVFKGKKM 
Sbjct: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300
           GRMGGKQRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300

Query: 301 ANNDEDTETLEPLVADLGEVDPFMVGE 328
           A  DED+E LEPLVADLGEVDPFMVG+
Sbjct: 301 ATEDEDSEKLEPLVADLGEVDPFMVGD 323

[Close]

BLAST of CmoCh06G015820 vs. ExPASy TrEMBL
Match: A0A0A0LAV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.2e-154
Identity = 277/328 (84.45%), Postives = 301/328 (91.77%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60
           MSALSRGLISRFRLLSINS+AS +IT+SSSSSSS T+ SCY+FFR FST+   QA DGS 
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120
            +S I EAKPG M  NS RTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKLREFPV++DALLPVGT IGVRHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240
           PGQ++DVTGI+RGKGFQGVMK+HGFKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKS-ILPFPTY 300
           GRMGGKQRTVKNVW+YKIDPARNLMWV+G +PGAEGNFVFIKDA YKK +KS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 301 FANNDEDTETLEPLVADLGEVDPFMVGE 328
           FA + EDT+ LEPLVADLGEVDPFM G+
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMTGD 328

[Close]

BLAST of CmoCh06G015820 vs. ExPASy TrEMBL
Match: E5GC40 (50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 8.4e-153
Identity = 272/328 (82.93%), Postives = 301/328 (91.77%), Query Frame = 0


Query: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60
           MSALSRGLISR RLLSINS AS ++TSSS SSSS T+ SCY+FFR FST+   QA DGS 
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120
            +S IIEAKPG MS NS+RTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKL+EFPV++DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240
           PGQ++DVTGI+RGKGFQGVMK+HGFKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKS-ILPFPTY 300
           GRMGGKQRTVKNVW+YKIDPARNL+WV+G +PGAEG+FVFIKDA YK+ +KS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FANNDEDTETLEPLVADLGEVDPFMVGE 328
           FA + EDT+ LEPLVADLGEVDPFM+G+
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of CmoCh06G015820 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 485.3 bits (1248), Expect = 3.8e-137
Identity = 248/331 (74.92%), Postives = 274/331 (82.78%), Query Frame = 0


Query: 1   MSALSRGLISRF-RLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGS 60
           M+A+ RGL+SR  + LSI S        + SSS S  H S +F  R FS++  +  G GS
Sbjct: 1   MAAVPRGLLSRINQFLSIRSI-------TPSSSESLPHCSSFFLIRRFSSDTGLMDGGGS 60

Query: 61  SL---SSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVK 120
            +    + IIEAK G MS  SKRTG+IAVKCGM+ALWDKWG R+PI++LWVDDNIVSQVK
Sbjct: 61  DIIGAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVK 120

Query: 121 TIEKEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGV 180
           T+EKEGI ALQIGCGQKK KHL+K  VGHFRAQGVPLKRKLREFPVTEDALLPVGT++GV
Sbjct: 121 TVEKEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGV 180

Query: 181 RHFVPGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKG 240
           RHFVPGQ++DVTGITRGKGFQG MK+HGF GMPASHGASLSHRS GSTGQRDAPGKVFKG
Sbjct: 181 RHFVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKG 240

Query: 241 KKMAGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPF 300
           +KMAGRMG  QRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDA+ KKPD S LPF
Sbjct: 241 RKMAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPF 300

Query: 301 PTYFANNDEDTETLEPLVADLGEVDPFMVGE 328
           PTY A  DED   LEPLVADLGEVDPFM+ E
Sbjct: 301 PTYLAPEDEDPSELEPLVADLGEVDPFMLAE 324

[Close]

BLAST of CmoCh06G015820 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 155.2 bits (391), Expect = 8.9e-38
Identity = 91/229 (39.74%), Postives = 134/229 (58.52%), Query Frame = 0


Query: 62  SSPIIEAKPG----VMSPNSKRTGVIAVKCGMSALWDKWGARVPITVL-WVDDNIVSQVK 121
           SS +I++ P     V S      GV+  K GM + +++ G  VP+TV+ + + NIV+Q+K
Sbjct: 34  SSLLIKSSPKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIK 93

Query: 122 TIEKEGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTE-DALLPVGTTIG 181
           T+  +G  A+QIG  + + K LTKPE GH +  G    R L+EF +T  +   P    + 
Sbjct: 94  TLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVF 153

Query: 182 VRHFVPGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFK 241
              F  G  +DV G T GKGFQG +K+H FK    +HG S SHR+LGS G    PG+V+K
Sbjct: 154 DEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYK 213

Query: 242 GKKMAGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDA 285
           GKKM GRMGG +  ++ + + K+D   N++ ++G +PG  GN + I  A
Sbjct: 214 GKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPA 261

The following BLAST results are available for this feature:

BLAST of CmoCh06G015820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRN8	5.3e-136	74.92	50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
Q5NQ64	1.3e-57	51.32	50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 ...	[more]
Q2G8Y0	4.9e-57	52.43	50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 ...	[more]
Q5FTY3	8.3e-57	52.51	50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpl...	[more]
Q5LLU6	6.0e-55	51.14	50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / ...	[more]

BLAST of CmoCh06G015820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5I5	1.1e-184	100.00	50S ribosomal protein L3-2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1I7Y9	6.8e-179	97.25	50S ribosomal protein L3-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1CAF7	4.3e-165	89.91	50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0LAV0	1.2e-154	84.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1	[more]
E5GC40	8.4e-153	82.93	50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of CmoCh06G015820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17465.1	3.8e-137	74.92	ribosomal protein L3 plastid	[more]
AT2G43030.1	8.9e-38	39.74	Ribosomal protein L3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 81..282 e-value: 1.3E-74 score: 248.4
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 1..327
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 79..285 score: 33.627979
None	No IPR available	GENE3D	3.30.160.810		coord: 111..174 e-value: 9.1E-23 score: 82.5
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 203..288 e-value: 3.3E-25 score: 90.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..241
None	No IPR available	PANTHER	PTHR11229:SF15	BNAA01G27990D PROTEIN	coord: 1..327
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 176..260 e-value: 4.6E-18 score: 65.3
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 73..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G015820.1	CmoCh06G015820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome