CmoCh06G015640 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G015640
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Prefoldin subunit 3
Location	Cmo_Chr06: 11018587 .. 11023396 (+)
RNA-Seq Expression	CmoCh06G015640
Synteny	CmoCh06G015640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGGAGGTTTTGGGTTTTTCTTCCAATCGGAAATGGCTACAGCAACATTGTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCGGCACCGTTGTCAGTGACAGAAGAGGAATTCCGGCGGCTCAGTTCGTGGAGGACGTTCGTATCTATCTCTCTAATTTAGGCCTCGATGTTCAATCCGCCCTTGCTTTTCTCCAGGAGCGGTACTCTCTCGTTCTATTTTTATTTTTATTTGATTCAAATCCGGAAATGTCGGTGTAGTTCTTGTCTATTGATGTTTTTGATTTTGTGTCTTGCTTTCTGTCACTTTTAGTGATTTTCTAGCATGTGCTGATGAGTTCTTGATTATTGTTTTCTGACACTTTGAAGTCCTGTTCTAAGTTGTAGGCTCCAATTAAGGTTTTCATGACTTGATGTATGTGTTAGTGAAGTTGAATTTGTTTGTTTAGTCGTCGTATTGCAGCTCTACTTTTTTTTTTGAAACTTTACTCGTTTCTAGTGGCTGAGAGTGAATCGAACTTTCTAGAATTTTCGTTTTTGTGGTTTTCTTAGAGTTACATCATTGTTGAAGTCTGCTGGATTCAGTTTGTGTGATTTAGAGCTATCTTTTTGAGCTCCTCGACTTAGTGTATCTCTAAGAGCTTTACATGCATTAGTTTCCATGACTTAGCTTAGTGTTACTGTGTACTTGATGTGAATCATGGAACTCTCTCTGCACTCGAACACGTGAAAATTGTTAGTAGATTGTAGCGAATAAATGTTGCTTTATTCAACTCTTTCCTACGCTTTACAAAATAGGGTCCATGCGGGAAGATATTCATATTTGTTTCTTAAGTTTAACGCCCCCCACCCCGTTGTATAGTTTTTTTTTTTTTTTTTTTTATTATACTCTGGAAATATCTCATGCAGACTTCAGCAATACAAGTTAGTTGAGATGAAACTCCTTGCTCAACAAAGGGACCTGCAGGTTTGATGTTTTTTTTTTTTTTTTTTTAAATTTTAGGGTACTTTCTTTCTGTTTTTCCAGATTTTTCTTTTACATGTTCATCATCTCACGCTGAAGTTATGAAATATTGTCAGATACTGTTTCTATTCATCACTTTATTGAATCCAAACTGGGTATAAGCTAAATAATTGATAATTTTACACATTGAAATCATTCTAAATTACGGAGCTATCAGATTAAAAAGGATGGATTTTAAGAAATTACAAGTTCTACTATGATCATTGGCAGATAACATGAACTACATTTGTGAGCCCTGAAATTAGATTATATATATATTAAGATGCAAGCTAAGGTACATGGCTTGTGTGTGTAGGTGATGCATGTTTGATTTAATGAAGAAAGTATCTGCCTCAGGCTCTCAGCATCATAGTTAGGCACCCGCCTTATAATAAATGGGACTTTACTATTAAAAATGTGTACTTGTATTTGATTAGAAAGTCAAGTAAGAGATGGTATTTTCTCATAGTTAAAGTCAGTATTTAATGTTTAGCTACTTAAATGTTACGGAACCATAATGCTTGTGGCCTAACTATCATCCTTTGCGGTTACCCTTCCATCCTGTCAGGCAAAGATTCCAGACATAAAGAAGTGTTTGGGTATAGTTGCTACTTTACAAGCAAAGAAGGATGCAGCCACTGGTGAGGTTCGTCTTTTTGTCTCCCATGGTAGCTTTGGTTATTTATACCATCTTGGAGATATGTGGTCACCTAATGACTAAATTATTTGCATTATATGATATTATCGCATATTGAAATTTATTTTCAAGAGCATTTTGAAATGATTTCCTACGGTTTCTTGCTTTCCTGAAGAAAGGTGCTTGTGTTGAATTTTTTTTCTTCAAAGTCTTTTTAAAAGAAATAAGAAAAGTTGCTTAAAGGCCCATGTCTAATATTGAAATTTATGTTCAATTGTTTTTCCATTTGATATTTTCTAATTTTATACCATTTGGTTCAGGGATGTGTTTTGGACTCAAACCATTTCCTCATGCCTCCATTGGCTATGATACTCTCTCTCTCTCTCCTTTTTTTTTTTCCTAATTTTTTTCTTGAAAAACCAACTTTATGTGACTGCTACTCCCATATGATTTCCTGCTGAAAATAGAGGAAGAAAATTATAATCTGGATAACTATTCCTGAATTTTATCAAGTTCGTATGCTTTATGTGCAGCGCTCAGAGTGCAAGATGATAAAGTAGAAAATTACAGGGTGTAGACATAAGAATCTACTAGGGCTTACTGTAAAATTATTAATTGATAAAATAAACGTATAGGATTATCTGTTTCTGTTGTCAGCCTTAGCTAGATGTAGCTTGTGGATTTGTCGGTTTGCTTAGGGTATAATTTTCTACTTTTAATGATCTAGTATTGTAAGCATCTCTATGAAGTTGCGGTATTTCCTTTCTTTAACCATCTTAAACTTAAGTTTTCTTAAGCAATCTGTTTATCTTTAGCTATCATGCACAGCCACTTGTAGCAGATTTTGAGATCTCTGAGGGCATATATTCCCGGGCTCGCATTGAGGAAACTGAGTCAGTTTGTTTATGGCTTGGTGCAAATGTCATGCTGGACTATTCATGTGAAGAGGTTACAGATACTGGTCAAAAAGATCACTTTAATCATTTTCTCCATGTCTTATCCAATTTTGGAATAAAGGACACTGATTATGACTGTTTTCACGTTTACTGGTGCAGGCCACTGCCCTCCTACAGAAGAATCTGGATAATGCTAAAGCGAGCTTAGAAGTTCTTGTTGCTGATCTACAGTTTTTGAGGGACCAGGTGACAATAACCCAGGTAGGCACCCCTTTCTATTTCAACTAGTCGGCGTGTGTTTTTACTCACATTATTACCAATCATGCTATTTTCTGCTCAAGAAGTCATAACAACGTGAACGCTTCCATTTAAAAGACTAGGCAACATAACCCATTGTTTGGAAACTCTAGACATGACAGAATTTGGTGTTATTAACTATCAACTTCGGAGTCAAGATGGTTGGAATTTGCAGAAATTGAATGTGAATTAGGAAGATATTCAAATATCTTAGGTCCTTTTGATAATCATTTAGGCCTGATTGGATAACCATTTAGTTTTGAAAATTAAGCTTAAACACTGTTTCCACCTCTTAGATTTTTTTTCTTATGTTATCTACTTTTAACAAATGTTTTTGAAATTCAAGCCAAAGCTTTTATTTCTTTTTTTTTTTTAAAAAAAAACACCAAACCGTAATTAAGATCTCCTGATAATTATTAGCGACCAAGCACTTTTGGTGTGATTTTTGTTTGGGGTGCTCTCTACACTTGGCCTGTAGATTGTTCCGGTTTCTTTTGTGCAATAAACCCCTTGGTGTTTCTTACGAAAGAAGAAAAGAAAGTTTTTGGTTTTGGATTTGGCTAAAAATTCAAATCCTTCCTTGAGAAAGATGAAAACCATTGGAAAGAAAATGTGAAAAAAAAGCAAAATTTTAAAAAACAAAACACTAAATAGGGGTATCAAATGGGTGGGGTCTTAGTTTTCTTGTTTTTCAAAAATTAAGGTTATAAGTATTAGTTCCATGTACTAGGTTTTTTTTTTTTTTGTTGTTGTTGTCGTCTATTAGTAATTACTTATGTTTTCAAAATTCAAGTTAAGTTTGGAAACTGAACAAGTTGTTTCAAAAAATTTGTTTTTATTTTTGTAATTTGGGTAAGACTTCAAATGTTTTCTTAAGAAAGTAAAAAATTGTTGTAAGTAACTGAGTGAAGACAAACACAGGTTATAAAAAATCAAAGGCCAAAAGCTTAGCCCTATTTGATAATCATTAATTTTTTGGTTTTTAGGTTTTAAAATTTATGCTTGCACCCTTTCTAATCATTAATCTTCTAATCTTGTGTCTAGTAAACCCTTAAAGTTTAGAAGTGTCCAATAGTCTTTTAAACTTTTAATTTTGTGTTTCTAACGGCAATTCAACCTTGTTTTAAATATTCATAGACATAACTTAAAACTGAATTTGTTTTATGAACATAACTTTTAAATTTTATATTTATTATGTCTACCAACTTCATAAAGTTTCCAATTCCAAATATTGTTTATTTATAGTAAATGTCTTTCTAGTTTAATTTGAAAATCATAAATCTTTTGTTACTTCTTAAAAGAAAAAACAATCCATAATCAACACCAACTTTGTTACATGTAGCACAAGTAGATCAATCTTTGTTATTAAGAGTGAGTGATATGCTTAGTTCATCTCCAGTTTGTTAAATTTTTTTGTTACACAACTTCTAAGCAGGTGACGATAGCCCGTGTTTACAACTGGGATGTTCATCAGCGTCGAGTTCAGCTAGCTGGCACCAGTGTAGAAAGCTCGTAAGTTTTTTACGAGCCCTCGTATTTCATTGTTGGTGGAGAATCCATTTCTTGATTGGCAGTACCGTCCTGATCCATACATACCTTCTGAATTTAGGCCATTCAAAATTTTCCTTTATTGTCATTATCAAAAAAATGAACCTTTTTATTTATGGGTTCTGATCGCATCTACACTTTCAAAAGTGATGCTTATATCTAGGATGAGATTCGTTATGAAATTAGGTAGCTTTTGTGTGCCTGTTCTGTTACATTTGTTAGATTCTGCTGCTGTAAGTTTCGGGTTGATGGTCGTCGGGTCGTCATCCGGGTTACGTTACTTGGTTGAGGGTGTATTTGCTTTGAGAATCCCATCTTTATAACTTTATGTATTTGTTTTCAAAATCGCTTTCAGAGTGGTTTTAGGTTTGTATGGTTTTAGTCTTCCGTGAAAGTAAAAGGAAAAGGGGAAATGAATTCAAACAAGT

mRNA sequence

TTGTGGAGGTTTTGGGTTTTTCTTCCAATCGGAAATGGCTACAGCAACATTGTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCGGCACCGTTGTCAGTGACAGAAGAGGAATTCCGGCGGCTCAGTTCGTGGAGGACGTTCGTATCTATCTCTCTAATTTAGGCCTCGATGTTCAATCCGCCCTTGCTTTTCTCCAGGAGCGACTTCAGCAATACAAGTTAGTTGAGATGAAACTCCTTGCTCAACAAAGGGACCTGCAGGCAAAGATTCCAGACATAAAGAAGTGTTTGGGTATAGTTGCTACTTTACAAGCAAAGAAGGATGCAGCCACTGGTGAGCCACTTGTAGCAGATTTTGAGATCTCTGAGGGCATATATTCCCGGGCTCGCATTGAGGAAACTGAGTCAGTTTGTTTATGGCTTGGTGCAAATGTCATGCTGGACTATTCATGTGAAGAGGCCACTGCCCTCCTACAGAAGAATCTGGATAATGCTAAAGCGAGCTTAGAAGTTCTTGTTGCTGATCTACAGTTTTTGAGGGACCAGGTGACAATAACCCAGGTGACGATAGCCCGTGTTTACAACTGGGATGTTCATCAGCGTCGAGTTCAGCTAGCTGGCACCAGTGTAGAAAGCTCGTAAGTTTTTTACGAGCCCTCGTATTTCATTGTTGGTGGAGAATCCATTTCTTGATTGGCAGTACCGTCCTGATCCATACATACCTTCTGAATTTAGGCCATTCAAAATTTTCCTTTATTGTCATTATCAAAAAAATGAACCTTTTTATTTATGGGTTCTGATCGCATCTACACTTTCAAAAGTGATGCTTATATCTAGGATGAGATTCGTTATGAAATTAGGTAGCTTTTGTGTGCCTGTTCTGTTACATTTGTTAGATTCTGCTGCTGTAAGTTTCGGGTTGATGGTCGTCGGGTCGTCATCCGGGTTACGTTACTTGGTTGAGGGTGTATTTGCTTTGAGAATCCCATCTTTATAACTTTATGTATTTGTTTTCAAAATCGCTTTCAGAGTGGTTTTAGGTTTGTATGGTTTTAGTCTTCCGTGAAAGTAAAAGGAAAAGGGGAAATGAATTCAAACAAGT

Coding sequence (CDS)

ATGGCTACAGCAACATTGTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCGGCACCGTTGTCAGTGACAGAAGAGGAATTCCGGCGGCTCAGTTCGTGGAGGACGTTCGTATCTATCTCTCTAATTTAGGCCTCGATGTTCAATCCGCCCTTGCTTTTCTCCAGGAGCGACTTCAGCAATACAAGTTAGTTGAGATGAAACTCCTTGCTCAACAAAGGGACCTGCAGGCAAAGATTCCAGACATAAAGAAGTGTTTGGGTATAGTTGCTACTTTACAAGCAAAGAAGGATGCAGCCACTGGTGAGCCACTTGTAGCAGATTTTGAGATCTCTGAGGGCATATATTCCCGGGCTCGCATTGAGGAAACTGAGTCAGTTTGTTTATGGCTTGGTGCAAATGTCATGCTGGACTATTCATGTGAAGAGGCCACTGCCCTCCTACAGAAGAATCTGGATAATGCTAAAGCGAGCTTAGAAGTTCTTGTTGCTGATCTACAGTTTTTGAGGGACCAGGTGACAATAACCCAGGTGACGATAGCCCGTGTTTACAACTGGGATGTTCATCAGCGTCGAGTTCAGCTAGCTGGCACCAGTGTAGAAAGCTCGTAA

Protein sequence

MATATLSSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQRRVQLAGTSVESS

Homology

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BLAST of CmoCh06G015640 vs. ExPASy Swiss-Prot
Match: P57741 (Probable prefoldin subunit 3 OS=Arabidopsis thaliana OX=3702 GN=At5g49510 PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.0e-73
Identity = 146/184 (79.35%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 10  SSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQYKLVEMKLL 69
           SSSS S SG+ +++RRGIPAA+F++DV  YLS  GLD  SALAF QERLQQYK+VEMKLL
Sbjct: 2   SSSSPSGSGSDLTERRGIPAAKFIQDVETYLSQSGLDPNSALAFHQERLQQYKVVEMKLL 61

Query: 70  AQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVCLW 129
           AQQRDLQAKIPDI+KCL +VATL+AKK   TGE L+ADFE+SEGIYSRA IE+T+SVCLW
Sbjct: 62  AQQRDLQAKIPDIEKCLEVVATLEAKK--GTGEALLADFEVSEGIYSRACIEDTDSVCLW 121

Query: 130 LGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQ 189
           LGANVML+YSCEEA+ALL+ NL+NAKASLEVLVADLQFLRDQVT+TQVTIARVYNWDVHQ
Sbjct: 122 LGANVMLEYSCEEASALLKNNLENAKASLEVLVADLQFLRDQVTVTQVTIARVYNWDVHQ 181

Query: 190 RRVQ 194
           RRV+
Sbjct: 182 RRVK 183

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BLAST of CmoCh06G015640 vs. ExPASy Swiss-Prot
Match: P61759 (Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 5.7e-32
Identity = 75/166 (45.18%), Postives = 109/166 (65.66%), Query Frame = 0


Query: 26  GIPAAQFVEDVRIYLSNLGLD-VQSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIKK 85
           GIP A FVEDV  ++   G +   + L  L E+ Q+YK +E+ L  ++R L+ +IP+IK+
Sbjct: 23  GIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQ 82

Query: 86  CLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVCLWLGANVMLDYSCEEAT 145
            L I+  +Q KK++     +   F +++ +Y +A +  T+ VCLWLGANVML+Y  +EA 
Sbjct: 83  TLEILKYMQKKKESTNS--METRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQ 142

Query: 146 ALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQR 191
           ALL+KNL  A  +L+ L  DL FLRDQ T T+V +ARVYNWDV +R
Sbjct: 143 ALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 186

[Close]

BLAST of CmoCh06G015640 vs. ExPASy Swiss-Prot
Match: Q2TBX2 (Prefoldin subunit 3 OS=Bos taurus OX=9913 GN=VBP1 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-31
Identity = 76/166 (45.78%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 26  GIPAAQFVEDVRIYLSNLGLDVQS-ALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIKK 85
           GIP A FVEDV  ++   G +     L  L E+ Q+YK +E+ L  ++R L+ +IP+IK+
Sbjct: 24  GIPEAVFVEDVDSFMKQPGNETADIVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQ 83

Query: 86  CLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVCLWLGANVMLDYSCEEAT 145
            L I+   Q KK++ +   L   F +++ +Y +A +  T+ VCLWLGANVML+Y  +EA 
Sbjct: 84  TLEILKYKQKKKESTSS--LETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQ 143

Query: 146 ALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQR 191
           ALL+KNL  A  +L+ L  DL FLRDQ T T+V +ARVYNWDV +R
Sbjct: 144 ALLEKNLLTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187

[Close]

BLAST of CmoCh06G015640 vs. ExPASy Swiss-Prot
Match: P61758 (Prefoldin subunit 3 OS=Homo sapiens OX=9606 GN=VBP1 PE=1 SV=4)

HSP 1 Score: 132.5 bits (332), Expect = 5.4e-30
Identity = 78/188 (41.49%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 4   ATLSSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLD-VQSALAFLQERLQQYK 63
           A +  S      ++G       GIP A FVEDV  ++   G +   + L  L E+ Q+YK
Sbjct: 2   AAVKDSCGKGEMATGNGRRLHLGIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYK 61

Query: 64  LVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEE 123
            +E+ L  ++R L+ +IP+IK+ L I+  +Q KK++     +   F +++ +Y +A +  
Sbjct: 62  FMELNLAQKKRRLKGQIPEIKQTLEILKYMQKKKESTNS--METRFLLADNLYCKASVPP 121

Query: 124 TESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARV 183
           T+ VCLWLGANVML+Y  +EA ALL+KNL  A  +L+ L  DL FLRDQ T T+V +ARV
Sbjct: 122 TDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARV 181

Query: 184 YNWDVHQR 191
           YNWDV +R
Sbjct: 182 YNWDVKRR 187

[Close]

BLAST of CmoCh06G015640 vs. ExPASy Swiss-Prot
Match: Q5RCG9 (Prefoldin subunit 3 OS=Pongo abelii OX=9601 GN=VBP1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.4e-30
Identity = 78/188 (41.49%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 4   ATLSSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLD-VQSALAFLQERLQQYK 63
           A +  S      ++G       GIP A FVEDV  ++   G +   + L  L E+ Q+YK
Sbjct: 2   AAVKDSCGKGEMATGNGRRLHLGIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYK 61

Query: 64  LVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEE 123
            +E+ L  ++R L+ +IP+IK+ L I+  +Q KK++     +   F +++ +Y +A +  
Sbjct: 62  FMELNLAQKKRRLKGQIPEIKQTLEILKYMQKKKESTNS--METRFLLADNLYCKASVPP 121

Query: 124 TESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARV 183
           T+ VCLWLGANVML+Y  +EA ALL+KNL  A  +L+ L  DL FLRDQ T T+V +ARV
Sbjct: 122 TDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARV 181

Query: 184 YNWDVHQR 191
           YNWDV +R
Sbjct: 182 YNWDVKRR 187

[Close]

BLAST of CmoCh06G015640 vs. ExPASy TrEMBL
Match: A0A6J1F2D0 (Prefoldin subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111441741 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.5e-99
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATATLSSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQ 60
           MATATLSSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQ
Sbjct: 1   MATATLSSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQ 60

Query: 61  YKLVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARI 120
           YKLVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARI
Sbjct: 61  YKLVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARI 120

Query: 121 EETESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIA 180
           EETESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIA
Sbjct: 121 EETESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIA 180

Query: 181 RVYNWDVHQRRVQLAGTSVESS 203
           RVYNWDVHQRRVQLAGTSVESS
Sbjct: 181 RVYNWDVHQRRVQLAGTSVESS 202

[Close]

BLAST of CmoCh06G015640 vs. ExPASy TrEMBL
Match: A0A6J1IA97 (Prefoldin subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111470684 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.6e-96
Identity = 197/202 (97.52%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MATATLSSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQ 60
           MATA+L   SSSSSSSSGTVVSDRRGIPAAQFVEDVR YLSNLGLDVQSALAFLQERLQQ
Sbjct: 1   MATASL---SSSSSSSSGTVVSDRRGIPAAQFVEDVRTYLSNLGLDVQSALAFLQERLQQ 60

Query: 61  YKLVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARI 120
           YKLVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARI
Sbjct: 61  YKLVEMKLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARI 120

Query: 121 EETESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIA 180
           EETESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIA
Sbjct: 121 EETESVCLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIA 180

Query: 181 RVYNWDVHQRRVQLAGTSVESS 203
           RVYNWDVHQRRVQLAGTSVESS
Sbjct: 181 RVYNWDVHQRRVQLAGTSVESS 199

[Close]

BLAST of CmoCh06G015640 vs. ExPASy TrEMBL
Match: A0A6J1GWC5 (transcription factor bHLH148-like OS=Cucurbita moschata OX=3662 GN=LOC111457480 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 185/196 (94.39%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 7   SSSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQYKLVEM 66
           SSSSSSSSSSS  VV+DRRGIPAAQFVEDVR YLS L LDVQSALAFLQERLQQYKLVEM
Sbjct: 195 SSSSSSSSSSSAAVVTDRRGIPAAQFVEDVRTYLSQLELDVQSALAFLQERLQQYKLVEM 254

Query: 67  KLLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESV 126
           KLLAQQRDLQAKIPDIKKCL IVATLQAKKDAATGEPLVADFEISEGIYSRARIEET+SV
Sbjct: 255 KLLAQQRDLQAKIPDIKKCLDIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETDSV 314

Query: 127 CLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWD 186
           CLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWD
Sbjct: 315 CLWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWD 374

Query: 187 VHQRRVQLAGTSVESS 203
           VHQRR+QLAG SVE S
Sbjct: 375 VHQRRIQLAGASVEDS 390

[Close]

BLAST of CmoCh06G015640 vs. ExPASy TrEMBL
Match: A0A6J1IQ23 (Prefoldin subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111479474 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.5e-88
Identity = 181/195 (92.82%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 8   SSSSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQYKLVEMK 67
           SSSSSSSSS+  VV+DRRGIPAAQFVEDVR YLS L LDVQSALAFLQERLQQYKLVEMK
Sbjct: 5   SSSSSSSSSAAVVVTDRRGIPAAQFVEDVRTYLSQLELDVQSALAFLQERLQQYKLVEMK 64

Query: 68  LLAQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVC 127
           LLAQQRDLQAKIPDIKKCL IVATLQAKKDAATGEPLVADFEISEGIYSRARIEET+SVC
Sbjct: 65  LLAQQRDLQAKIPDIKKCLDIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETDSVC 124

Query: 128 LWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDV 187
           LWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDV
Sbjct: 125 LWLGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDV 184

Query: 188 HQRRVQLAGTSVESS 203
           +QRR+QLA  SVE S
Sbjct: 185 YQRRIQLACASVEDS 199

[Close]

BLAST of CmoCh06G015640 vs. ExPASy TrEMBL
Match: A0A5D3CXJ3 (Prefoldin subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001610 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.5e-87
Identity = 178/193 (92.23%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 10  SSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQYKLVEMKLL 69
           +S SSSSSG VV+DRRGIPAAQFVEDVR YLS L LDVQSALAFLQERLQQYKLVEMKLL
Sbjct: 2   ASESSSSSGAVVTDRRGIPAAQFVEDVRTYLSQLQLDVQSALAFLQERLQQYKLVEMKLL 61

Query: 70  AQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVCLW 129
           AQQRDLQAKIPDIKKCL IVATLQAKK+AATGEPLVADFEISEGIYSRARIEET+SVCLW
Sbjct: 62  AQQRDLQAKIPDIKKCLDIVATLQAKKEAATGEPLVADFEISEGIYSRARIEETDSVCLW 121

Query: 130 LGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQ 189
           LGANVMLDYS EEA  LLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQ
Sbjct: 122 LGANVMLDYSYEEAITLLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQ 181

Query: 190 RRVQLAGTSVESS 203
           RRVQLAG SVE S
Sbjct: 182 RRVQLAGASVEDS 194

[Close]

BLAST of CmoCh06G015640 vs. TAIR 10
Match: AT5G49510.1 (prefoldin 3 )

HSP 1 Score: 276.2 bits (705), Expect = 2.1e-74
Identity = 146/184 (79.35%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 10  SSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQYKLVEMKLL 69
           SSSS S SG+ +++RRGIPAA+F++DV  YLS  GLD  SALAF QERLQQYK+VEMKLL
Sbjct: 2   SSSSPSGSGSDLTERRGIPAAKFIQDVETYLSQSGLDPNSALAFHQERLQQYKVVEMKLL 61

Query: 70  AQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVCLW 129
           AQQRDLQAKIPDI+KCL +VATL+AKK   TGE L+ADFE+SEGIYSRA IE+T+SVCLW
Sbjct: 62  AQQRDLQAKIPDIEKCLEVVATLEAKK--GTGEALLADFEVSEGIYSRACIEDTDSVCLW 121

Query: 130 LGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQ 189
           LGANVML+YSCEEA+ALL+ NL+NAKASLEVLVADLQFLRDQVT+TQVTIARVYNWDVHQ
Sbjct: 122 LGANVMLEYSCEEASALLKNNLENAKASLEVLVADLQFLRDQVTVTQVTIARVYNWDVHQ 181

Query: 190 RRVQ 194
           RRV+
Sbjct: 182 RRVK 183

[Close]

BLAST of CmoCh06G015640 vs. TAIR 10
Match: AT5G49510.2 (prefoldin 3 )

HSP 1 Score: 276.2 bits (705), Expect = 2.1e-74
Identity = 146/184 (79.35%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 10  SSSSSSSSGTVVSDRRGIPAAQFVEDVRIYLSNLGLDVQSALAFLQERLQQYKLVEMKLL 69
           SSSS S SG+ +++RRGIPAA+F++DV  YLS  GLD  SALAF QERLQQYK+VEMKLL
Sbjct: 2   SSSSPSGSGSDLTERRGIPAAKFIQDVETYLSQSGLDPNSALAFHQERLQQYKVVEMKLL 61

Query: 70  AQQRDLQAKIPDIKKCLGIVATLQAKKDAATGEPLVADFEISEGIYSRARIEETESVCLW 129
           AQQRDLQAKIPDI+KCL +VATL+AKK   TGE L+ADFE+SEGIYSRA IE+T+SVCLW
Sbjct: 62  AQQRDLQAKIPDIEKCLEVVATLEAKK--GTGEALLADFEVSEGIYSRACIEDTDSVCLW 121

Query: 130 LGANVMLDYSCEEATALLQKNLDNAKASLEVLVADLQFLRDQVTITQVTIARVYNWDVHQ 189
           LGANVML+YSCEEA+ALL+ NL+NAKASLEVLVADLQFLRDQVT+TQVTIARVYNWDVHQ
Sbjct: 122 LGANVMLEYSCEEASALLKNNLENAKASLEVLVADLQFLRDQVTVTQVTIARVYNWDVHQ 181

Query: 190 RRVQ 194
           RRV+
Sbjct: 182 RRVK 183

The following BLAST results are available for this feature:

BLAST of CmoCh06G015640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P57741	3.0e-73	79.35	Probable prefoldin subunit 3 OS=Arabidopsis thaliana OX=3702 GN=At5g49510 PE=1 S...	[more]
P61759	5.7e-32	45.18	Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=2	[more]
Q2TBX2	3.7e-31	45.78	Prefoldin subunit 3 OS=Bos taurus OX=9913 GN=VBP1 PE=2 SV=1	[more]
P61758	5.4e-30	41.49	Prefoldin subunit 3 OS=Homo sapiens OX=9606 GN=VBP1 PE=1 SV=4	[more]
Q5RCG9	5.4e-30	41.49	Prefoldin subunit 3 OS=Pongo abelii OX=9601 GN=VBP1 PE=2 SV=1	[more]

BLAST of CmoCh06G015640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2D0	2.5e-99	100.00	Prefoldin subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111441741 PE=3 SV=1	[more]
A0A6J1IA97	7.6e-96	97.52	Prefoldin subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111470684 PE=3 SV=1	[more]
A0A6J1GWC5	1.6e-90	94.39	transcription factor bHLH148-like OS=Cucurbita moschata OX=3662 GN=LOC111457480 ...	[more]
A0A6J1IQ23	4.5e-88	92.82	Prefoldin subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111479474 PE=3 SV=1	[more]
A0A5D3CXJ3	8.5e-87	92.23	Prefoldin subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G...	[more]

BLAST of CmoCh06G015640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49510.1	2.1e-74	79.35	prefoldin 3	[more]
AT5G49510.2	2.1e-74	79.35	prefoldin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 51..182
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 61..185 e-value: 1.1E-29 score: 102.8
IPR016655	Prefoldin subunit 3	PIRSF	PIRSF016396	Prefoldin_3	coord: 10..200 e-value: 4.5E-66 score: 220.0
IPR016655	Prefoldin subunit 3	PANTHER	PTHR12409	PREFOLDIN SUBUNIT 3	coord: 10..193
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 46..188 e-value: 8.3E-25 score: 89.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G015640.1	CmoCh06G015640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0006457	protein folding
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0007021	tubulin complex assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005844	polysome
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0015631	tubulin binding