CmoCh06G015530 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G015530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat
LocationCmo_Chr06: 10920331 .. 10926850 (-)
RNA-Seq ExpressionCmoCh06G015530
SyntenyCmoCh06G015530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACGAAACCCTTCGAACACAGTCCACAGAACTTCAAAACACAACCCCTTGAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTACCCACTAACTAGTCAATTAGAGAATACCAGCTTGATTCGGCACCCCACTCGTGAACATAGTTTGAATCTTAAACCAATTGATCATTCATATATTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGCTAAACCACGAGTTTAAGGCGAAGAGGCTCGTTTTGGCTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAAGAAAACCCATTAAATGCTATAAGATTTTATATCTGGGTTTCGAATATCGACCCTTCACTTGCAAAGAAACAATCGATTCGAGGGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGTTATTGTCAGTTGATCTACTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACACAGGAATTGCTTTGTATATTACTTGGAAGTTGGGGTAGATTGGGTTTGGCAAAATACTGTGTGGAAGTATTTGGGCAAATTTCGTTTCTGGGACTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCTCTGGACTTGGCTTATTTAAAATTTCAGCAAATGTCGTCTCATAACTGCGTTCCTGATAGGTTCACTTACAACATTCTCATCCATGGTGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTGTTCACGTATACGATCTTGATTGATGGATTTTTCAATGCCATGAGGGCTGAGGAAGCCTTTGGAGTTTTACAGACAATGAAGGAGAGGAATGTGGTTCCAAATGCAGCAACTATGAGATCCCTGGTTCATGGAGTATTTCGTTGTTGTGCCCCGGATAAAGCTTTTGAATATTTATTGGACTTTGTCGAGAAGAAGCCAGGCGTGTCTCAATTGGTCTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTTATGTTTTTGAGTAAAATGGGGAAGAAAGGTTATGTTCCGGATAGTTCAACCTTTAATGTCACTATGGCATGTGTATTAAATAAGCTAGACCAGAAAGAAGCTTGTGATATATTCGATAATTGTACACAGAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTGCGCTTATTGAAGCTCTGTACAAGGCGGGGAAAACGGAGATTGGAAACAAATATATGGATCGAATAATAAAGGATGGTCTTGTTTCGAACAACTATTCATATAATATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCAGCAGAAATCTTTAGGGATCTGCAGTCTAAAGGCATTTCTCCAAATATTGTAACTTTTAATACACTTATTAGTGGGTATTGCAGAAATGGAGGTATGGACAAAGCTCAGGAATTTCTTGAAATGCTATTAGAATGTCGTTTTAGACCGGATATCTTCACTTTTAATTCAGTAATTGATGGCCTCTGCCAAGCACACAAGTACGAAGATGCTTTTGGTTGTTTCAATGAAATGGTCGAGTGGGATGTCACTCCAAATGCTATCACGTATAATATATTGATACGCTCCTTTTGTGCGATTGGAAATGTTGCTAGATCTACTCAACTCTTGAGAAAAATGCAACTTCACGGTATACAACCCGATACTTTTTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGAATAAAGTTCATAAAGCTGAGAAGCTTTTTGATTCAATGTTAAGGTTGGGTATACAGCCTGACAATTATACTTATGGTGCTTTTATTAAGTCTTTGTGCAAGTCAGGTAGGCATGATGAAGTAAGGGAGATGTTTCTCTCAATGAAGGTGAATGGTTGTACTCCTGACTCTTATACTTGCAGTCTTATTAACGCCCATATTTAAATCTTTACTTGATCTTTATGTGAATGCTGAGGAAATTGTGGAGATTGAAGAAAATATGTGAACAAGAACATTTTATGAACAGCTTGGACATCGGGTATTGGCCGTTTATTGGTACTGATACCTTGATGTTTTCAGATATGAATTGTTTCAAGTACTGTCAAAATAAAAAATGTCCGTTGTTGTAGAGAGAGGAGAACGGGCGATTCACTTTCTATTTGATGTTAACAAGCAGTCTGATGAGTTCTTAGACGCCACGTCAAATACAGTCTTTCTGAACTAATCAAGGAACATATCCGCAGTTATTAAAAAGGGTCATGGCTTTTTACTAAATCTTGATGCTTGGCCGTGAATATGCTAAAACTTAAGGTGCCATCATATTTCATTTGCAGGCACACTTTGGTGTGTAGTACGGCACAGTCACCTTGAACAGAGTAGTTGAAACTCCAAGGTTTAGGGGATGAAACTTACCATCTGCCCCCTACATCGACCCCATGGTACAATGTAAGGTTTCAGAATTTGGCAGGATTTTCAATACTGTAGCCATGGAGTTTCTTCGAGGACGGGAAAAACACAAAGGCTTCTATGATGGATATTCATCTGTGATTCATGTGACCTCGATACTTTATCTGTTGCCAATGTGAAATGGCGAGCAGGTGTTATCTTCCTATGTATTTATTTGAAAAGAAGTCCAACGTTGAAGAATTTTTACTGATTTCTCTGTAACTACTAACCTAGGCTTGATTTGAGGACTGGACACTCCAAGACAGTTGGGAAATTCTGAAACCATTTCTTGTGCTATTCCATTTCCCCCTTTTCTGTTTATCATGTCAGAATGATGAATGACATAAAAAGGACTTGACATGGCTGTTTCTATTGGCTTTTGAAGGGAGATTTGGTCTGTCAATTTCGCATCTAGCTCTTATGATGGAGATAACACAATGTTAAAGTTTTTCTATTAGCTTTCCCGCCATGAAATTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCATTGGGCTTTTCCTTTTGGGCTTCCCCACAAAGTTTTTAAAACACGTATGCTAGGGAGAGGTTTCTACACTCTTATAAAGAATGTTTTGTTCTCCTCTTCAACCGATGTGAGATCTCATAAGTAGAATAGGTAGGTTGTTGTATAGGGATTATAAATTCTTACTTTTAACTAGAATTCATATAATTTCCATTTGATTGTAGCTAATGCTTTTGATAGGTTAAGTGGATAACGTTGCATATACAGTGGGTGCCACACGTTTTGACCCCGTTGAAACTTTCTCCAAGAACTTGCTGTGTTTGGATCTTGTCTAGACGCTGTCCATGGGATAGAGGTAACATACTCTGATGACACAACACACTACTTGCGGTCTGTTTAAAAGCAGCCCACTGTACTTACGAATTAAATCAGCTCATTGTACTTTCTTCTATATGAATTAACTTCAACCCATTGAGTACGGAAAAAAAACTGAACCTGGGATAGGTATTATATACAACAAAAGACTGATATTAAACATATTTTGCTTGTAGCTGTACTAGTTGATAGGAGGGTGGTGGATTAATATTCACGTCGTATAGCCATTGTATGTTCTCTAGTTGGTCTGCACTCTGCAGTAGGTTTCTCGAATCAAATGCTTAATGTTCTCTTTTATACTTGTTCATTCTTAAATGAAAGGTGTTTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGCTATTAGCTAAANAGCCACTTATCATGTTCTTGGGTTGATGTGGAATGACCTTTTGCCTTTCAGATATCTTGAAATGCCTCTTAGGTCATAATTGTAAAACTTTGTTTCGGGATAGGTTGAAAAAGTTCCAAACAAACCGGTCAGAGATTCGAATCTCACCCTACAACAGATTTTTACCTCAGGAAAGGACCATTTTTTCTTGGGAAGGGTAAAATACTTTAATCAAGTCCATGCACACAATTCTTCTGTACTTTCTATTCTGTTTCGAAATTCTGACTGATATTGAATAGAAAACTCGAGAGGGTTAACAGAGTTTTTTTTTTATGGAAGGTTGTGGTAAAAGGGGTTGGTCCCATTTAGTTAGTTGGAGGTCAGTGTCAAGATCTCTTTGTGTGTGTGTGTGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCAAGGTCCTCTAAGTGGTTATGGTGGTGTTTTCCCCCCTCTGAAACCACAATCATTGTGGTATTGGATCACAGATTCACAATTAGTAGATATGAGGTTAACCCCATTGGTTTCGATTTCAATGAGGGGTCTAATAACTACGGCGAACCTGCATAAATCGTTCGCTCAGCGTTTCCTCTGTACACTTGGTTTCTCTATAATGATGGTAGCAGAATCAGTCTTAAAGGGTTTTACTTTTCTTGTTTCATTCCTCCTGTAAGCTATAGGAAGTCCAACTTTAGAAAAAGCTATGTCTTTTAATGCCTTGTTGCCCTTTGAATGATACCTTTGATTTCACTCAGGGGGCCTCGGCTCTTTTACTTCACTTGCAATGGTGTGTTCTTTATAAGAAGGCGTGGGGAGATTTGAATCATTTATTATCAAGGTTGATGTTCCTTTTCTATTGAGGTTCGACGTTGTGACACGACAGACATAATTTGTCCATCCTCTCTTGAAAAGTGGTCTCTTTGCTCTTCTGTGAAGTATTTGGTTGGAAAGAAACTAGAGGTCTTCTTCAGATGATGAGAATTCTTGCCCTGCTTTAATGAATCGATCTGGTTCCATACTTCACTACCTTTTTATAGTTGTCACGCACTTTTTCTATCAATATCTGGCCTCCTTTCTGTACCTTTGCATTTCATTTAATTTTTGTTGCCCTAGTGTTGGCCTGACCACTCTTCCGCGAGGCTGCATGTGAGATCCAACGTCAATTGAGGAGAAGAATGAAACATTCTTTATATGGGTGTAAAAACCTCTCCCTAGTAGACACGTTTTAAAAACTTTGAGGAGAAAACCCGAAGAGGACAATATCTGCAAACGGTTGGCTTGGGTTGTTACAAATAGTATCAGAGTCAGACACCGGGCAATGTGTTAGCGAGGAGGCTAAGCTCCAAAGGGGTGTGGACACGAAGTAGTGTGCTAGCAAGGACGCTGGACTCTATAGGGGGGTGAATTGGGGGGGTCCCACATTGATGTGAGAAGGGAACAAGTGCCAGCGAGGACGCTGGACCTTGAAGGGGGTGGATTGTGAGATCTCATATCGGTTGAGTAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTTTCTAGTAGACGTGTTTTGAAAACCTTGAGGGGAAAGCTCGAAAGAGAAAGCCCAAAAAGGATAAGGGTCAGCTATCATCAACTTGTTGTTGCTGACAAAACAACGTTTCAGTGTATTGATGTCTAGCGACTGATATTCCTTCGCTTTTGAGGGAATACTTGTCTGTTTGCTAAATCTGGACCACTGCATTGATCCCTTTGATTCTACCTTTCTGCAAGTGGGTTTATATTTAATATACTTGCTTGCCAAATTGAATTCTTTCACCGTTGTTTAGGTTGGAGAGTCAGTGAGAAACTTTATGAGTTCTCTTTTTAACATCCATTTTTTCAGGGATAGCTATTCTCCATAATGGGGGTGAATTTAGTTGGCGCTCGAGCGAGTGGTTGGGTTATTTCACTCGATCATAATGTCTTGACGTGACAGCAAAACGCCTCGACATCACGAGTCGATCAGTTTGCTTCTCAGCCAAGTTTGCTTCGATGTGATGAGCTCGACCCGAGCGGTAGGAAATGAAAAGAAGGCTGCAAAACTTTGTAAAATCTTCTATCAAACTACGACGTTTCTTATCCATAGAGATGGTTTGACTGAATCAAGCTCATTCAAGCACACTCGCAAAACGATGAAGGATTTTTATTGAGACATAACAAGCAAGACTCGTAGAAGATCGATATTGAGTGATTATTCATATGACATTGCGAAGATAGGAACAAAAGTATTTGTAGTAGCCATTTGAGTGAGTTTGAAGATCAACATTATGACGTTTCAAATCATCTCAATTGGAAGTATTGTGTAAGCTGATATTCTAATTATAGTTTGTGAGTGATACAAAAGTTGAGACCATTTCTTCTAAGTTAGGGTCGGAGGAAGAGTTTTTCGACACGTGAAAAATGATTGTCCTAATAAAGTAGGTTTGTCAAAGGGC

mRNA sequence

ATGAAGGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACGAAACCCTTCGAACACAGTCCACAGAACTTCAAAACACAACCCCTTGAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTACCCACTAACTAGTCAATTAGAGAATACCAGCTTGATTCGGCACCCCACTCGTGAACATAGTTTGAATCTTAAACCAATTGATCATTCATATATTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGCTAAACCACGAGTTTAAGGCGAAGAGGCTCGTTTTGGCTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAAGAAAACCCATTAAATGCTATAAGATTTTATATCTGGGTTTCGAATATCGACCCTTCACTTGCAAAGAAACAATCGATTCGAGGGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGTTATTGTCAGTTGATCTACTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACACAGGAATTGCTTTGTATATTACTTGGAAGTTGGGGTAGATTGGGTTTGGCAAAATACTGTGTGGAAGTATTTGGGCAAATTTCGTTTCTGGGACTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCTCTGGACTTGGCTTATTTAAAATTTCAGCAAATGTCGTCTCATAACTGCGTTCCTGATAGGTTCACTTACAACATTCTCATCCATGGTGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTGTTCACGTATACGATCTTGATTGATGGATTTTTCAATGCCATGAGGGCTGAGGAAGCCTTTGGAGTTTTACAGACAATGAAGGAGAGGAATGTGGTTCCAAATGCAGCAACTATGAGATCCCTGGTTCATGGAGTATTTCGTTGTTGTGCCCCGGATAAAGCTTTTGAATATTTATTGGACTTTGTCGAGAAGAAGCCAGGCGTGTCTCAATTGGTCTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTTATGTTTTTGAGTAAAATGGGGAAGAAAGGTTATGTTCCGGATAGTTCAACCTTTAATGTCACTATGGCATGTGTATTAAATAAGCTAGACCAGAAAGAAGCTTGTGATATATTCGATAATTGTACACAGAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTGCGCTTATTGAAGCTCTGTACAAGGCGGGGAAAACGGAGATTGGAAACAAATATATGGATCGAATAATAAAGGATGGTCTTGTTTCGAACAACTATTCATATAATATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCAGCAGAAATCTTTAGGGATCTGCAGTCTAAAGGCATTTCTCCAAATATTGTAACTTTTAATACACTTATTAGTGGGTATTGCAGAAATGGAGGTATGGACAAAGCTCAGGAATTTCTTGAAATGCTATTAGAATGTCGTTTTAGACCGGATATCTTCACTTTTAATTCAGTAATTGATGGCCTCTGCCAAGCACACAAGTACGAAGATGCTTTTGGTTGTTTCAATGAAATGGTCGAGTGGGATGTCACTCCAAATGCTATCACGTATAATATATTGATACGCTCCTTTTGTGCGATTGGAAATGTTGCTAGATCTACTCAACTCTTGAGAAAAATGCAACTTCACGGTATACAACCCGATACTTTTTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGAATAAAGTTCATAAAGCTGAGAAGCTTTTTGATTCAATGTTAAGGGATAGCTATTCTCCATAATGGGGGTGAATTTAGTTGGCGCTCGAGCGAGTGGTTGGGTTATTTCACTCGATCATAATGTCTTGACGTGACAGCAAAACGCCTCGACATCACGAGTCGATCAGTTTGCTTCTCAGCCAAGTTTGCTTCGATGTGATGAGCTCGACCCGAGCGGTAGGAAATGAAAAGAAGGCTGCAAAACTTTGTAAAATCTTCTATCAAACTACGACGTTTCTTATCCATAGAGATGGTTTGACTGAATCAAGCTCATTCAAGCACACTCGCAAAACGATGAAGGATTTTTATTGAGACATAACAAGCAAGACTCGTAGAAGATCGATATTGAGTGATTATTCATATGACATTGCGAAGATAGGAACAAAAGTATTTGTAGTAGCCATTTGAGTGAGTTTGAAGATCAACATTATGACGTTTCAAATCATCTCAATTGGAAGTATTGTGTAAGCTGATATTCTAATTATAGTTTGTGAGTGATACAAAAGTTGAGACCATTTCTTCTAAGTTAGGGTCGGAGGAAGAGTTTTTCGACACGTGAAAAATGATTGTCCTAATAAAGTAGGTTTGTCAAAGGGC

Coding sequence (CDS)

ATGAAGGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACGAAACCCTTCGAACACAGTCCACAGAACTTCAAAACACAACCCCTTGAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTACCCACTAACTAGTCAATTAGAGAATACCAGCTTGATTCGGCACCCCACTCGTGAACATAGTTTGAATCTTAAACCAATTGATCATTCATATATTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGCTAAACCACGAGTTTAAGGCGAAGAGGCTCGTTTTGGCTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAAGAAAACCCATTAAATGCTATAAGATTTTATATCTGGGTTTCGAATATCGACCCTTCACTTGCAAAGAAACAATCGATTCGAGGGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGTTATTGTCAGTTGATCTACTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACACAGGAATTGCTTTGTATATTACTTGGAAGTTGGGGTAGATTGGGTTTGGCAAAATACTGTGTGGAAGTATTTGGGCAAATTTCGTTTCTGGGACTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCTCTGGACTTGGCTTATTTAAAATTTCAGCAAATGTCGTCTCATAACTGCGTTCCTGATAGGTTCACTTACAACATTCTCATCCATGGTGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTGTTCACGTATACGATCTTGATTGATGGATTTTTCAATGCCATGAGGGCTGAGGAAGCCTTTGGAGTTTTACAGACAATGAAGGAGAGGAATGTGGTTCCAAATGCAGCAACTATGAGATCCCTGGTTCATGGAGTATTTCGTTGTTGTGCCCCGGATAAAGCTTTTGAATATTTATTGGACTTTGTCGAGAAGAAGCCAGGCGTGTCTCAATTGGTCTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTTATGTTTTTGAGTAAAATGGGGAAGAAAGGTTATGTTCCGGATAGTTCAACCTTTAATGTCACTATGGCATGTGTATTAAATAAGCTAGACCAGAAAGAAGCTTGTGATATATTCGATAATTGTACACAGAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTGCGCTTATTGAAGCTCTGTACAAGGCGGGGAAAACGGAGATTGGAAACAAATATATGGATCGAATAATAAAGGATGGTCTTGTTTCGAACAACTATTCATATAATATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCAGCAGAAATCTTTAGGGATCTGCAGTCTAAAGGCATTTCTCCAAATATTGTAACTTTTAATACACTTATTAGTGGGTATTGCAGAAATGGAGGTATGGACAAAGCTCAGGAATTTCTTGAAATGCTATTAGAATGTCGTTTTAGACCGGATATCTTCACTTTTAATTCAGTAATTGATGGCCTCTGCCAAGCACACAAGTACGAAGATGCTTTTGGTTGTTTCAATGAAATGGTCGAGTGGGATGTCACTCCAAATGCTATCACGTATAATATATTGATACGCTCCTTTTGTGCGATTGGAAATGTTGCTAGATCTACTCAACTCTTGAGAAAAATGCAACTTCACGGTATACAACCCGATACTTTTTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGAATAAAGTTCATAAAGCTGAGAAGCTTTTTGATTCAATGTTAAGGGATAGCTATTCTCCATAA

Protein sequence

MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYPLTSQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP
Homology
BLAST of CmoCh06G015530 vs. ExPASy Swiss-Prot
Match: Q9LSQ2 (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR40 PE=3 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 4.7e-189
Identity = 319/580 (55.00%), Postives = 422/580 (72.76%), Query Frame = 0

Query: 67  NTSLIRHPTREHSLN-----LKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVS 126
           N S   +P    +LN       P++  YIS+++  KDWFL+LN EF   R+ L  +FV+S
Sbjct: 22  NASTSVNPKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVIS 81

Query: 127 ILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKE 186
           +LQNQ+NPL+++RFY+WVSN DP  AK QS++ VLG  L+R+G   P+LLS++LL++I++
Sbjct: 82  VLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKG---PLLLSMELLKEIRD 141

Query: 187 SGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDL 246
           SG +++ EL+C+L+GSWGRLGLAKYC +VF QISFLG+ P+TRLYNAVIDAL+KSNSLDL
Sbjct: 142 SGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDL 201

Query: 247 AYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILID 306
           AYLKFQQM S  C PDRFTYNILIHGVC+ GVVDEA+RL+KQME  G  PNVFTYTILID
Sbjct: 202 AYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID 261

Query: 307 GFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGV 366
           GF  A R +EA   L+ M+ R + PN AT+R+ VHG+FRC  P KAFE L+ F+EK   +
Sbjct: 262 GFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNL 321

Query: 367 SQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIF 426
            ++  D +LYCLSNNSMA E   FL K+G++GY+PDSSTFN  M+C+L   D  E C IF
Sbjct: 322 QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIF 381

Query: 427 DNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKG 486
           D    RGVKPGF+ YL L++AL  A +   G++Y+ ++  DGL+S+ YSYN VIDCLCK 
Sbjct: 382 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKA 441

Query: 487 KLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTF 546
           + ++ AA    ++Q +GISPN+VTFNT +SGY   G + K    LE LL   F+PD+ TF
Sbjct: 442 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 501

Query: 547 NSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQL 606
           + +I+ LC+A + +DAF CF EM+EW + PN ITYNILIRS C+ G+  RS +L  KM+ 
Sbjct: 502 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 561

Query: 607 HGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           +G+ PD +++NA IQS+ +M KV KAE+L  +MLR    P
Sbjct: 562 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598

BLAST of CmoCh06G015530 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.3e-57
Identity = 128/456 (28.07%), Postives = 218/456 (47.81%), Query Frame = 0

Query: 187 TQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKS-NSLDLAYLK 246
           T  +  +++ S+ RL L    + +       G  P    YNAV+DA I+S  ++  A   
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 247 FQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFN 306
           F++M      P+ FTYNILI G C  G +D AL L  +ME  G  PNV TY  LIDG+  
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 307 AMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLV 366
             + ++ F +L++M  + + PN  +   +++G+ R                         
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR------------------------- 312

Query: 367 CDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCT 426
                          E    L++M ++GY  D  T+N  +     + +  +A  +     
Sbjct: 313 ----------EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 372

Query: 427 QRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMD 486
           + G+ P   TY +LI ++ KAG      +++D++   GL  N  +Y  ++D   +   M+
Sbjct: 373 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 432

Query: 487 RAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVI 546
            A  + R++   G SP++VT+N LI+G+C  G M+ A   LE + E    PD+ ++++V+
Sbjct: 433 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 492

Query: 547 DGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQ 606
            G C+++  ++A     EMVE  + P+ ITY+ LI+ FC       +  L  +M   G+ 
Sbjct: 493 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 552

Query: 607 PDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           PD F++ ALI +Y     + KA +L + M+     P
Sbjct: 553 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553

BLAST of CmoCh06G015530 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.2e-56
Identity = 127/472 (26.91%), Postives = 233/472 (49.36%), Query Frame = 0

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L +D  +Q++ +G+      L I++  + R     +   V G++  LG  P T  +N +I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L     +  A +   +M  + C PD  TYN +++G+CR G    AL L+++ME     
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
            +VFTY+ +ID        + A  + + M+ + +  +  T  SLV G+ +    +     
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTM--ACV 410
           L D V ++   + +  + +L          EA     +M  +G  P+  T+N  M   C+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            N+L   EA ++ D   +    P   T+ +LI+      + + G K    I K GLV+N 
Sbjct: 346 QNRL--SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 405

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +Y++++   C+   +  A E+F+++ S G+ P+++T+  L+ G C NG ++KA E  E 
Sbjct: 406 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 465

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L + +    I  + ++I+G+C+  K EDA+  F  +    V PN +TY ++I   C  G+
Sbjct: 466 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 525

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYS 641
           ++ +  LLRKM+  G  P+  ++N LI+++ R   +  + KL + M    +S
Sbjct: 526 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

BLAST of CmoCh06G015530 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 9.0e-55
Identity = 128/466 (27.47%), Postives = 218/466 (46.78%), Query Frame = 0

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L++ +L ++ + G +     L  LL  +         V +  Q+   G  P T  +N +I
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L   N    A     +M +  C PD  TY ++++G+C+ G  D A  L+ +ME     
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
           P V  Y  +IDG       ++A  + + M+ + + PN  T  SL+  +        A   
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFN--VTMACV 410
           L D +E+K          ++          EA     +M K+   P   T++  +   C+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            ++LD  EA  +F+    +   P   TY  LI+   K  + E G +    + + GLV N 
Sbjct: 374 HDRLD--EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 433

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +YN++I  L +    D A EIF+++ S G+ PNI+T+NTL+ G C+NG ++KA    E 
Sbjct: 434 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 493

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L   +  P I+T+N +I+G+C+A K ED +  F  +    V P+ + YN +I  FC  G+
Sbjct: 494 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 553

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSM 635
              +  L ++M+  G  P++  +N LI++  R      + +L   M
Sbjct: 554 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597

BLAST of CmoCh06G015530 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.4e-54
Identity = 118/460 (25.65%), Postives = 219/460 (47.61%), Query Frame = 0

Query: 183 GLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDLA 242
           G+K       +L+ +  R    +  + +   +   GL P  + +  V+   I+   LD A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 243 YLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGL-GYFPNVFTYTILID 302
               +QM    C     + N+++HG C+ G V++AL  +++M    G+FP+ +T+  L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 303 GFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGV 362
           G   A   + A  ++  M +    P+  T  S++ G+ +     +A E L   + +    
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 363 SQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIF 422
           + +  + ++  L   +   EA      +  KG +PD  TFN  +  +    + + A ++F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 423 DNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKG 482
           +    +G +P   TY  LI++L   GK +     + ++   G   +  +YN +ID  CK 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 483 KLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTF 542
                A EIF +++  G+S N VT+NTLI G C++  ++ A + ++ ++    +PD +T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 543 NSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQL 602
           NS++   C+    + A      M      P+ +TY  LI   C  G V  +++LLR +Q+
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 603 HGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
            GI     ++N +IQ  FR  K  +A  LF  ML  + +P
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

BLAST of CmoCh06G015530 vs. ExPASy TrEMBL
Match: A0A6J1F885 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441755 PE=4 SV=1)

HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 637/641 (99.38%), Postives = 637/641 (99.38%), Query Frame = 0

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60
           MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP
Sbjct: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60

Query: 61  LTSQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVV 120
           LTSQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVV
Sbjct: 61  LTSQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVV 120

Query: 121 SILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIK 180
           SILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIK
Sbjct: 121 SILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIK 180

Query: 181 ESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLD 240
           ESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLD
Sbjct: 181 ESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLD 240

Query: 241 LAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILI 300
           LAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILI
Sbjct: 241 LAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILI 300

Query: 301 DGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPG 360
           DGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPG
Sbjct: 301 DGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPG 360

Query: 361 VSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDI 420
           VSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDI
Sbjct: 361 VSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDI 420

Query: 421 FDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCK 480
           FDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCK
Sbjct: 421 FDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCK 480

Query: 481 GKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFT 540
           GKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFT
Sbjct: 481 GKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFT 540

Query: 541 FNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQ 600
           FNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQ
Sbjct: 541 FNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQ 600

Query: 601 LHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           LHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLR    P
Sbjct: 601 LHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRLGIQP 641

BLAST of CmoCh06G015530 vs. ExPASy TrEMBL
Match: A0A6J1IIL6 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111474300 PE=4 SV=1)

HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 625/641 (97.50%), Postives = 631/641 (98.44%), Query Frame = 0

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60
           MKGLHSSGLRATPVLRNRPQEAYSTINEYRR+NPSNTVHRTSKH+PLNNTE PSRGNPYP
Sbjct: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNTVHRTSKHSPLNNTEGPSRGNPYP 60

Query: 61  LTSQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVV 120
           L SQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVV
Sbjct: 61  LISQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVV 120

Query: 121 SILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIK 180
           SILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLG+NLYREGPDRPVLLSVDLLQQIK
Sbjct: 121 SILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGQNLYREGPDRPVLLSVDLLQQIK 180

Query: 181 ESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLD 240
           ESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLD
Sbjct: 181 ESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLD 240

Query: 241 LAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILI 300
           LAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILI
Sbjct: 241 LAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILI 300

Query: 301 DGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPG 360
           DGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLL+FV+KKP 
Sbjct: 301 DGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLEFVQKKPS 360

Query: 361 VSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDI 420
           VSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLN LD KEACDI
Sbjct: 361 VSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNTLDLKEACDI 420

Query: 421 FDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCK 480
           FDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDR+IKDGLVSNNYSYNMVIDCLCK
Sbjct: 421 FDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRLIKDGLVSNNYSYNMVIDCLCK 480

Query: 481 GKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFT 540
           GKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFT
Sbjct: 481 GKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFT 540

Query: 541 FNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQ 600
           FNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQ
Sbjct: 541 FNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQ 600

Query: 601 LHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           LHGIQPDTFSFNALIQSY RMNKVHKAEKLFDSMLR    P
Sbjct: 601 LHGIQPDTFSFNALIQSYLRMNKVHKAEKLFDSMLRLGIQP 641

BLAST of CmoCh06G015530 vs. ExPASy TrEMBL
Match: A0A6J1C7X8 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111009187 PE=4 SV=1)

HSP 1 Score: 1059.7 bits (2739), Expect = 4.9e-306
Identity = 530/646 (82.04%), Postives = 573/646 (88.70%), Query Frame = 0

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60
           M+GL SS  RATPVLRNR        ++ RR+ PSNT+ RTSK       ++PSRGNP P
Sbjct: 1   MRGLPSSAFRATPVLRNR------LTSKNRRQFPSNTIQRTSK-------QSPSRGNPAP 60

Query: 61  LTSQLENTSLIRHP-----TREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLA 120
           L + L+N +L+R P       + S +L+PIDHSYISR+L SKDW LLLNHEFKA R+VLA
Sbjct: 61  LITHLKNPNLVRLPNPSPLADKLSSSLEPIDHSYISRVLSSKDWLLLLNHEFKASRIVLA 120

Query: 121 PQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDL 180
           PQFVVSILQNQENPLNAIRFYIWVSN+DP LAKKQ+IRGVLGRNLYR+GPDRP+LLSVDL
Sbjct: 121 PQFVVSILQNQENPLNAIRFYIWVSNVDPLLAKKQAIRGVLGRNLYRKGPDRPMLLSVDL 180

Query: 181 LQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIK 240
           LQ+IKESGLKVT+ELLCIL+GSWGRLGLAKYCVEVFGQI F+GLNP+TRLYNAVIDALIK
Sbjct: 181 LQEIKESGLKVTEELLCILIGSWGRLGLAKYCVEVFGQIGFMGLNPSTRLYNAVIDALIK 240

Query: 241 SNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFT 300
           SNSLDLAYLKFQQM SHNCVPDRFTYNILIHGVCRLGVVDEALRL+KQMEGLGYFPNVFT
Sbjct: 241 SNSLDLAYLKFQQMPSHNCVPDRFTYNILIHGVCRLGVVDEALRLIKQMEGLGYFPNVFT 300

Query: 301 YTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFV 360
           YTILIDGFFNA RA+EAF VLQ MKERNVVPNAATMRSLVHGVFRC A DKAFE+LL+FV
Sbjct: 301 YTILIDGFFNAKRADEAFRVLQKMKERNVVPNAATMRSLVHGVFRCIALDKAFEFLLEFV 360

Query: 361 EKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQK 420
           EKK GVSQLVCDNILYCLS NSMASEA MFLS+ G+KGYVP SSTFNVTMACVL KLD K
Sbjct: 361 EKKQGVSQLVCDNILYCLSMNSMASEAAMFLSRTGEKGYVPGSSTFNVTMACVLKKLDLK 420

Query: 421 EACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVI 480
           EACDIFD C Q+GVKPGFSTYLALIEALYKAGK EIGN+YMD IIKDGLVSN YSYNM+I
Sbjct: 421 EACDIFDICIQKGVKPGFSTYLALIEALYKAGKVEIGNQYMDWIIKDGLVSNIYSYNMII 480

Query: 481 DCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFR 540
           DCLCKGKLMD+A+EIF  LQ KGISPNIVTFNTLI GYCRNG MDKAQE LEMLLEC FR
Sbjct: 481 DCLCKGKLMDKASEIFSGLQYKGISPNIVTFNTLIGGYCRNGDMDKAQELLEMLLECSFR 540

Query: 541 PDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQL 600
           PDIFTFNSVIDGLCQAHKYEDAFGCF EMVEW ++PN+ITYNILI SFCAIG+VARSTQL
Sbjct: 541 PDIFTFNSVIDGLCQAHKYEDAFGCFTEMVEWGLSPNSITYNILIHSFCAIGDVARSTQL 600

Query: 601 LRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           LRKMQL+GIQPD+FSFNALIQSYFRMNKVHKAEKLF+ MLR    P
Sbjct: 601 LRKMQLNGIQPDSFSFNALIQSYFRMNKVHKAEKLFNLMLRLGIQP 633

BLAST of CmoCh06G015530 vs. ExPASy TrEMBL
Match: A0A0A0L5W1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165700 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 6.4e-306
Identity = 521/647 (80.53%), Postives = 570/647 (88.10%), Query Frame = 0

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60
           M+G  SS  RATPVLRNRP +AY+ IN++RR+ PSN++ RTSK +P NN EAPSRGNP P
Sbjct: 1   MRGFPSSAFRATPVLRNRPLQAYTPINKHRRQLPSNSIQRTSKQSPFNNLEAPSRGNPSP 60

Query: 61  LTSQLENTSLIRHPT------REHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVL 120
           LT+ L+  S I+  T       +HSL+LKPID SYIS+ILLSKDWFLLLNHEFKAKR+VL
Sbjct: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120

Query: 121 APQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVD 180
           +PQFVVSILQNQ+NPL+AIRFYIWVSN+DP L KKQ I+GVL RNL+REGPDRPVLLSVD
Sbjct: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALI 240
           LLQQIKESGLKVT+ELLCIL GSWGRLGLA YCVEVFGQI  LGLNPTTRLYNAV+DALI
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300
           KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF
Sbjct: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300

Query: 301 TYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDF 360
           TYTILIDGFFNA RA E F VLQTMKERNVVPN ATMRSLVHGVFRC APDKAFE LL+F
Sbjct: 301 TYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEF 360

Query: 361 VEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQ 420
           VE+K G++QLVCDNILYCLSNNSMASEAVMFL K GK+GYVP SSTFN+T+ACVL KLD 
Sbjct: 361 VERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420

Query: 421 KEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMV 480
           K  C +FDNC Q GVKPGFSTYL LIEALYKAGK EIGN+YMDR+I DGL+SN YSYNMV
Sbjct: 421 KVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMV 480

Query: 481 IDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRF 540
           IDCLCKGK MDRA+E+FRDL ++GISPNIVT+NTLI G+CRNG MDKAQE LEMLLE RF
Sbjct: 481 IDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRF 540

Query: 541 RPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQ 600
           RPDIFTFNS+IDGLCQAHK+E+AFGCF EMVEWDV PN ITYNILI SFCAIG+V+RST 
Sbjct: 541 RPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTH 600

Query: 601 LLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           LLR+M+LHGIQPDTFSFNALIQ Y   N+  KAEKLFDSMLR    P
Sbjct: 601 LLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQP 647

BLAST of CmoCh06G015530 vs. ExPASy TrEMBL
Match: A0A1S3AXI6 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483881 PE=4 SV=1)

HSP 1 Score: 1058.9 bits (2737), Expect = 8.4e-306
Identity = 527/648 (81.33%), Postives = 570/648 (87.96%), Query Frame = 0

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNN-TEAPSRGNPY 60
           M+G  S   R TPVLRNRP +AY+ IN +RR+ PS+++ RTSK +  NN  EAPSRGNP 
Sbjct: 1   MRGFLSLAFRETPVLRNRPLQAYTPINNHRRQFPSDSIQRTSKQSSFNNIVEAPSRGNPS 60

Query: 61  PLTSQLENTSLIRHPTR------EHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLV 120
           PLT+ L+ +S I+  TR      EH    KPIDHSYIS+ILLSKDWFLLLNHEFKAKR+V
Sbjct: 61  PLTTPLKASSSIQLSTRPSLADDEH----KPIDHSYISKILLSKDWFLLLNHEFKAKRIV 120

Query: 121 LAPQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSV 180
           L+ QFVVSILQNQ+NPLNAIRFYIWVSN DP L K Q I+GVLGRNLYREGPDRPVLLSV
Sbjct: 121 LSLQFVVSILQNQDNPLNAIRFYIWVSNADPLLVKGQVIQGVLGRNLYREGPDRPVLLSV 180

Query: 181 DLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDAL 240
           DLLQQIKESGLKVT+ELLCIL GSWGRLGLAKYCVEVFGQI  LGLNPTTRLYNAVIDAL
Sbjct: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLAKYCVEVFGQIGLLGLNPTTRLYNAVIDAL 240

Query: 241 IKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNV 300
           IKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNV
Sbjct: 241 IKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNV 300

Query: 301 FTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLD 360
           FTYTILIDGFFNA RA+EAF VLQTMKERNVVPNAATMRSLVHGVFRC APDKAFE LL+
Sbjct: 301 FTYTILIDGFFNAKRADEAFKVLQTMKERNVVPNAATMRSLVHGVFRCIAPDKAFELLLE 360

Query: 361 FVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLD 420
           FV++K GVSQLVCDNILYCLSNNSMAS+AVMFLSK GK+GYVP SSTFNVT+AC+L KLD
Sbjct: 361 FVKRKQGVSQLVCDNILYCLSNNSMASKAVMFLSKTGKEGYVPSSSTFNVTLACLLKKLD 420

Query: 421 QKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNM 480
            KE C IFDNC Q GVKPGFSTYL LIEALYKAGK EIGN+YMDR+I DGL+SN YSYNM
Sbjct: 421 LKETCTIFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNM 480

Query: 481 VIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECR 540
           VIDCLCKGK MDRA EIFRDL ++GISPNIVT+NTLI G+CRNG M+KAQE LE+LLECR
Sbjct: 481 VIDCLCKGKSMDRAYEIFRDLHNRGISPNIVTYNTLIGGFCRNGNMNKAQELLEILLECR 540

Query: 541 FRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARST 600
           FRPDIFTFNS+IDGLCQAHK+EDAFGCF EMVEWDV PN ITYNILIRSFCAIG+V+RST
Sbjct: 541 FRPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVPPNVITYNILIRSFCAIGDVSRST 600

Query: 601 QLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
            LLR+MQLHG+QPDTFSFNALIQ Y   N+V KAEKLF SMLR    P
Sbjct: 601 HLLRQMQLHGLQPDTFSFNALIQGYIGTNRVQKAEKLFCSMLRLGIQP 644

BLAST of CmoCh06G015530 vs. TAIR 10
Match: AT3G16890.1 (pentatricopeptide (PPR) domain protein 40 )

HSP 1 Score: 662.5 bits (1708), Expect = 3.4e-190
Identity = 319/580 (55.00%), Postives = 422/580 (72.76%), Query Frame = 0

Query: 67  NTSLIRHPTREHSLN-----LKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVS 126
           N S   +P    +LN       P++  YIS+++  KDWFL+LN EF   R+ L  +FV+S
Sbjct: 22  NASTSVNPKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVIS 81

Query: 127 ILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKE 186
           +LQNQ+NPL+++RFY+WVSN DP  AK QS++ VLG  L+R+G   P+LLS++LL++I++
Sbjct: 82  VLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKG---PLLLSMELLKEIRD 141

Query: 187 SGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDL 246
           SG +++ EL+C+L+GSWGRLGLAKYC +VF QISFLG+ P+TRLYNAVIDAL+KSNSLDL
Sbjct: 142 SGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDL 201

Query: 247 AYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILID 306
           AYLKFQQM S  C PDRFTYNILIHGVC+ GVVDEA+RL+KQME  G  PNVFTYTILID
Sbjct: 202 AYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID 261

Query: 307 GFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGV 366
           GF  A R +EA   L+ M+ R + PN AT+R+ VHG+FRC  P KAFE L+ F+EK   +
Sbjct: 262 GFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNL 321

Query: 367 SQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIF 426
            ++  D +LYCLSNNSMA E   FL K+G++GY+PDSSTFN  M+C+L   D  E C IF
Sbjct: 322 QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIF 381

Query: 427 DNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKG 486
           D    RGVKPGF+ YL L++AL  A +   G++Y+ ++  DGL+S+ YSYN VIDCLCK 
Sbjct: 382 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKA 441

Query: 487 KLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTF 546
           + ++ AA    ++Q +GISPN+VTFNT +SGY   G + K    LE LL   F+PD+ TF
Sbjct: 442 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 501

Query: 547 NSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQL 606
           + +I+ LC+A + +DAF CF EM+EW + PN ITYNILIRS C+ G+  RS +L  KM+ 
Sbjct: 502 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 561

Query: 607 HGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           +G+ PD +++NA IQS+ +M KV KAE+L  +MLR    P
Sbjct: 562 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598

BLAST of CmoCh06G015530 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-58
Identity = 128/456 (28.07%), Postives = 218/456 (47.81%), Query Frame = 0

Query: 187 TQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKS-NSLDLAYLK 246
           T  +  +++ S+ RL L    + +       G  P    YNAV+DA I+S  ++  A   
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 247 FQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFN 306
           F++M      P+ FTYNILI G C  G +D AL L  +ME  G  PNV TY  LIDG+  
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 307 AMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLV 366
             + ++ F +L++M  + + PN  +   +++G+ R                         
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR------------------------- 312

Query: 367 CDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCT 426
                          E    L++M ++GY  D  T+N  +     + +  +A  +     
Sbjct: 313 ----------EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 372

Query: 427 QRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMD 486
           + G+ P   TY +LI ++ KAG      +++D++   GL  N  +Y  ++D   +   M+
Sbjct: 373 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 432

Query: 487 RAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVI 546
            A  + R++   G SP++VT+N LI+G+C  G M+ A   LE + E    PD+ ++++V+
Sbjct: 433 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 492

Query: 547 DGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQ 606
            G C+++  ++A     EMVE  + P+ ITY+ LI+ FC       +  L  +M   G+ 
Sbjct: 493 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 552

Query: 607 PDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           PD F++ ALI +Y     + KA +L + M+     P
Sbjct: 553 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553

BLAST of CmoCh06G015530 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-57
Identity = 127/472 (26.91%), Postives = 233/472 (49.36%), Query Frame = 0

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L +D  +Q++ +G+      L I++  + R     +   V G++  LG  P T  +N +I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L     +  A +   +M  + C PD  TYN +++G+CR G    AL L+++ME     
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
            +VFTY+ +ID        + A  + + M+ + +  +  T  SLV G+ +    +     
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTM--ACV 410
           L D V ++   + +  + +L          EA     +M  +G  P+  T+N  M   C+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            N+L   EA ++ D   +    P   T+ +LI+      + + G K    I K GLV+N 
Sbjct: 346 QNRL--SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 405

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +Y++++   C+   +  A E+F+++ S G+ P+++T+  L+ G C NG ++KA E  E 
Sbjct: 406 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 465

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L + +    I  + ++I+G+C+  K EDA+  F  +    V PN +TY ++I   C  G+
Sbjct: 466 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 525

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYS 641
           ++ +  LLRKM+  G  P+  ++N LI+++ R   +  + KL + M    +S
Sbjct: 526 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

BLAST of CmoCh06G015530 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 216.5 bits (550), Expect = 6.4e-56
Identity = 128/466 (27.47%), Postives = 218/466 (46.78%), Query Frame = 0

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L++ +L ++ + G +     L  LL  +         V +  Q+   G  P T  +N +I
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L   N    A     +M +  C PD  TY ++++G+C+ G  D A  L+ +ME     
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
           P V  Y  +IDG       ++A  + + M+ + + PN  T  SL+  +        A   
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFN--VTMACV 410
           L D +E+K          ++          EA     +M K+   P   T++  +   C+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            ++LD  EA  +F+    +   P   TY  LI+   K  + E G +    + + GLV N 
Sbjct: 374 HDRLD--EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 433

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +YN++I  L +    D A EIF+++ S G+ PNI+T+NTL+ G C+NG ++KA    E 
Sbjct: 434 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 493

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L   +  P I+T+N +I+G+C+A K ED +  F  +    V P+ + YN +I  FC  G+
Sbjct: 494 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 553

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSM 635
              +  L ++M+  G  P++  +N LI++  R      + +L   M
Sbjct: 554 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597

BLAST of CmoCh06G015530 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-55
Identity = 118/460 (25.65%), Postives = 219/460 (47.61%), Query Frame = 0

Query: 183 GLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDLA 242
           G+K       +L+ +  R    +  + +   +   GL P  + +  V+   I+   LD A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 243 YLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGL-GYFPNVFTYTILID 302
               +QM    C     + N+++HG C+ G V++AL  +++M    G+FP+ +T+  L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 303 GFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGV 362
           G   A   + A  ++  M +    P+  T  S++ G+ +     +A E L   + +    
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 363 SQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIF 422
           + +  + ++  L   +   EA      +  KG +PD  TFN  +  +    + + A ++F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 423 DNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKG 482
           +    +G +P   TY  LI++L   GK +     + ++   G   +  +YN +ID  CK 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 483 KLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTF 542
                A EIF +++  G+S N VT+NTLI G C++  ++ A + ++ ++    +PD +T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 543 NSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQL 602
           NS++   C+    + A      M      P+ +TY  LI   C  G V  +++LLR +Q+
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 603 HGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
            GI     ++N +IQ  FR  K  +A  LF  ML  + +P
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LSQ24.7e-18955.00Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
Q9FIX37.3e-5728.07Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
P0C7Q76.2e-5626.91Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Q9SXD19.0e-5527.47Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Q9LFF13.4e-5425.65Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1F8850.0e+0099.38putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
A0A6J1IIL60.0e+0097.50putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
A0A6J1C7X84.9e-30682.04putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
A0A0A0L5W16.4e-30680.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165700 PE=4 SV=1[more]
A0A1S3AXI68.4e-30681.33putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
Match NameE-valueIdentityDescription
AT3G16890.13.4e-19055.00pentatricopeptide (PPR) domain protein 40 [more]
AT5G39710.15.2e-5828.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12700.14.4e-5726.91ATP binding;nucleic acid binding;helicases [more]
AT1G62670.16.4e-5627.47rna processing factor 2 [more]
AT3G53700.12.4e-5525.65Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 555..641
e-value: 1.9E-23
score: 85.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 171..305
e-value: 2.0E-28
score: 101.0
coord: 450..554
e-value: 2.1E-30
score: 107.4
coord: 340..449
e-value: 2.3E-12
score: 48.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 609..641
e-value: 4.4E-7
score: 27.7
coord: 504..538
e-value: 6.8E-6
score: 23.9
coord: 259..293
e-value: 4.0E-8
score: 30.9
coord: 539..573
e-value: 2.5E-9
score: 34.7
coord: 225..257
e-value: 1.2E-5
score: 23.2
coord: 469..503
e-value: 2.4E-9
score: 34.8
coord: 574..608
e-value: 1.4E-6
score: 26.1
coord: 294..328
e-value: 2.1E-7
score: 28.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 291..338
e-value: 2.0E-11
score: 43.9
coord: 536..584
e-value: 4.6E-18
score: 65.2
coord: 467..515
e-value: 2.8E-13
score: 49.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 253..285
e-value: 8.1E-13
score: 47.9
coord: 603..634
e-value: 3.2E-9
score: 36.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 434..464
e-value: 0.68
score: 10.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 607..641
score: 11.882107
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..326
score: 11.257313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 222..256
score: 9.481582
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 502..536
score: 12.484979
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 467..501
score: 12.178061
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 572..606
score: 11.783455
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 537..571
score: 12.232868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 257..291
score: 12.868624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..32
NoneNo IPR availablePANTHERPTHR47942:SF15OS12G0557800 PROTEINcoord: 52..641
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 52..641

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G015530.1CmoCh06G015530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding