CmoCh06G015520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G015520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor MYB111-like
Location	Cmo_Chr06: 10917887 .. 10919845 (-)
RNA-Seq Expression	CmoCh06G015520
Synteny	CmoCh06G015520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATAAGGGTATCCCACCGTTCAGTTTCTTCTTCTTTTTTACTCCCACAATTTAGGAAATCCTATAACTTAGGGACCAGCTCCCCAAGTTAAGCTCCGCTCCTCTCTGTCTGTCTTGTCTCTCTACAATTATTCAAACACTGTCTTAGCTAACCAAACAGTTGTTCTTGTCGCCGCCATTGTTGCTCTGATCCCTCTTTTTCATCATAGCTATGGTGAGAGCTCCTTGTTGTGAAAAAGTAGGCCTCAAAAGGGGAAGGTGGTCAGCTGAAGAAGATGAGCTCTTAACCAACTATATTCAAGCCAATGGTGAAGGTTCTTGGAGATCCTTACCCAAGAATGCAGGTCATTTTTCACTTCTCTTCCCTACCAATTGTTCGAGTTTTGTCAAATGATAAACAAACCCGGTTTTGAATCGGTTCCCTCGAGTATATTTTCAACCAAAGATTTGTGTTCGAAAAGAAATTCTAGGACGGTGAGGTTTGAATCTCAAACGTTTTGATTGAGAGACATGACCCTGCTGATCCTGATTCGTGTTTTTCTTTGTTTGTTAATCGAGCTACTTTTTTAACTATTCAAATTCCTAACATGTCTCGCATCCAAAAATGAAAAAAACGGGAAAAAGACAATAGAGGAATTATTTAAAAGTCAAACCTTAAATGTTTTGTTTGTTGGTTTTTTTTGGACATGTTCTTGAGACATTTATGGTACTATTGTAAAGGATTGTTAAGGTGCGGAAAGAGTTGTAGACTAAGATGGATTAACTACTTGAGGCGAGACTTGAAGAGAGGGAACATCACGGCAGATGAAGAACAAATGATTGTAAAGATGCATAACGCTTTTGGCAACAGGTAATTTTTTTAATTGTTAATAAAAATAACAATAGTTGAGCTATGCTTATATTGGCACTAATAAAAAAAATTATTGGTTAGATTAGATCAGAATTATTTTCAACAAGTTTATAATGAGTGATTTCATTTTTTTTCATTGGGTTCGGGTAAATACTAAAGATCTTGAACCATTGATCCGATAGAACAACTTAAAAGATAAAGAAGTATCGTTAATTTCTTCACGCTAGTTACAGTTCCAAATTCGAAATACCAACTATACCCATAAGAACGCTCTTAATTACATGATTTCTTCTTTATATAAACAGATATCGAATCGATTAAACAATTAGTTGTGACGTTATTGTTATTACCACCACCGCCATTAGTCTTATAATTATTTTCCTCGACCGTGTCTCCCTAAATAAATAACTGTGCCCAACTTAGTTGTCAAAGTGGTGGACCTTAGTATATCATATCAATCAAATCCAACTCGGTTTTTCTCTTATTTACTTTTTCAGGTGGTCTTTAATAGCATCACATATGCCGGGCCGAACAGACAATGAAATAAAAAACTACTGGAACTCTCATCTTAGTCGAAGAATCTACACAGTAACACGACCATCTGCCAAGTCTACTTCACCTATAACGGGCATCCTCGACATCAGTCCCGCACCCAAACGAAGGAAAAACACGACCGATCGAGCAAGTCGACAACAAACGAACGCAATCGAAGGGAAGACAATCCCTCCCCATATAGAGAAAGAGGAAAAAGAAGAAGGGTTGAGCTCAAAACATAGCAAAGAAGGAGAGGACTGGGGACCATATGATTGGCTAGATGGTGAAATAGAGAGACTCAATAATGATCTTGAATGGAATAAAAGCAATGAGAAAATGGCATTTGAAGATGATGTTCAAAATGGGGAGAGGTCTTCTTCTTCCTCCATCAACTCAGCTTTGGAAATGGATCAATGGCTCAACTTTGATTGGGAGCTTCACAAGATTTCTTCTTGGTTATGGGAAACCGAGACCGATCGATGTATTGAGAGTTAGGGTTTATTATCCTCGGAATTTCGAGAGTAATTATTAAAAACAATTAAAGTACGAGTCTCGTAGCGGTTTCGAAAAGAG

mRNA sequence

ATAAATAAGGGTATCCCACCGTTCAGTTTCTTCTTCTTTTTTACTCCCACAATTTAGGAAATCCTATAACTTAGGGACCAGCTCCCCAAGTTAAGCTCCGCTCCTCTCTGTCTGTCTTGTCTCTCTACAATTATTCAAACACTGTCTTAGCTAACCAAACAGTTGTTCTTGTCGCCGCCATTGTTGCTCTGATCCCTCTTTTTCATCATAGCTATGGTGAGAGCTCCTTGTTGTGAAAAAGTAGGCCTCAAAAGGGGAAGGTGGTCAGCTGAAGAAGATGAGCTCTTAACCAACTATATTCAAGCCAATGGTGAAGGTTCTTGGAGATCCTTACCCAAGAATGCAGGATTGTTAAGGTGCGGAAAGAGTTGTAGACTAAGATGGATTAACTACTTGAGGCGAGACTTGAAGAGAGGGAACATCACGGCAGATGAAGAACAAATGATTGTAAAGATGCATAACGCTTTTGGCAACAGGTGGTCTTTAATAGCATCACATATGCCGGGCCGAACAGACAATGAAATAAAAAACTACTGGAACTCTCATCTTAGTCGAAGAATCTACACAGTAACACGACCATCTGCCAAGTCTACTTCACCTATAACGGGCATCCTCGACATCAGTCCCGCACCCAAACGAAGGAAAAACACGACCGATCGAGCAAGTCGACAACAAACGAACGCAATCGAAGGGAAGACAATCCCTCCCCATATAGAGAAAGAGGAAAAAGAAGAAGGGTTGAGCTCAAAACATAGCAAAGAAGGAGAGGACTGGGGACCATATGATTGGCTAGATGGTGAAATAGAGAGACTCAATAATGATCTTGAATGGAATAAAAGCAATGAGAAAATGGCATTTGAAGATGATGTTCAAAATGGGGAGAGGTCTTCTTCTTCCTCCATCAACTCAGCTTTGGAAATGGATCAATGGCTCAACTTTGATTGGGAGCTTCACAAGATTTCTTCTTGGTTATGGGAAACCGAGACCGATCGATGTATTGAGAGTTAGGGTTTATTATCCTCGGAATTTCGAGAGTAATTATTAAAAACAATTAAAGTACGAGTCTCGTAGCGGTTTCGAAAAGAG

Coding sequence (CDS)

ATGGTGAGAGCTCCTTGTTGTGAAAAAGTAGGCCTCAAAAGGGGAAGGTGGTCAGCTGAAGAAGATGAGCTCTTAACCAACTATATTCAAGCCAATGGTGAAGGTTCTTGGAGATCCTTACCCAAGAATGCAGGATTGTTAAGGTGCGGAAAGAGTTGTAGACTAAGATGGATTAACTACTTGAGGCGAGACTTGAAGAGAGGGAACATCACGGCAGATGAAGAACAAATGATTGTAAAGATGCATAACGCTTTTGGCAACAGGTGGTCTTTAATAGCATCACATATGCCGGGCCGAACAGACAATGAAATAAAAAACTACTGGAACTCTCATCTTAGTCGAAGAATCTACACAGTAACACGACCATCTGCCAAGTCTACTTCACCTATAACGGGCATCCTCGACATCAGTCCCGCACCCAAACGAAGGAAAAACACGACCGATCGAGCAAGTCGACAACAAACGAACGCAATCGAAGGGAAGACAATCCCTCCCCATATAGAGAAAGAGGAAAAAGAAGAAGGGTTGAGCTCAAAACATAGCAAAGAAGGAGAGGACTGGGGACCATATGATTGGCTAGATGGTGAAATAGAGAGACTCAATAATGATCTTGAATGGAATAAAAGCAATGAGAAAATGGCATTTGAAGATGATGTTCAAAATGGGGAGAGGTCTTCTTCTTCCTCCATCAACTCAGCTTTGGAAATGGATCAATGGCTCAACTTTGATTGGGAGCTTCACAAGATTTCTTCTTGGTTATGGGAAACCGAGACCGATCGATGTATTGAGAGTTAG

Protein sequence

MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVTRPSAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIPPHIEKEEKEEGLSSKHSKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDVQNGERSSSSSINSALEMDQWLNFDWELHKISSWLWETETDRCIES

Homology

[Close]

BLAST of CmoCh06G015520 vs. ExPASy Swiss-Prot
Match: Q9FJ07 (Transcription factor MYB111 OS=Arabidopsis thaliana OX=3702 GN=MYB111 PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-68
Identity = 137/247 (55.47%), Postives = 169/247 (68.42%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M RAPCCEK+GLKRGRW+AEEDE+LT YIQ NGEGSWRSLPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LRRDLKRGNIT+DEE++IVK+H+  GNRWSLIA+H+PGRTDNEIKNYWNSHLSR+IY  T
Sbjct: 61  LRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAFT 120

Query: 121 RPSA-------------KSTSPITGILDISPAPKRRKNTTDRAS----RQQTNAIEGKTI 180
             S              KS S  +G  + +   K++K  T R+S    +Q   A +  + 
Sbjct: 121 AVSGDGHNLLVNDVVLKKSCSSSSGAKNNNKTKKKKKGRTSRSSMKKHKQMVTASQCFSQ 180

Query: 181 PPHIEKEEKEEGLSSKHSKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAF----EDDV 227
           P  +E +  E G +     EGE  GPY+WLDGE+ERL +   W  ++E+       E   
Sbjct: 181 PKELESDFSEGGQNGNF--EGESLGPYEWLDGELERLLSSCVWECTSEEAVIGVNDEKVC 240

[Close]

BLAST of CmoCh06G015520 vs. ExPASy Swiss-Prot
Match: O22264 (Transcription factor MYB12 OS=Arabidopsis thaliana OX=3702 GN=MYB12 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58
Identity = 120/235 (51.06%), Postives = 155/235 (65.96%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M RAPCCEKVG+KRGRW+AEED++L+NYIQ+NGEGSWRSLPKNAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYT-V 120
           LR DLKRGNIT +EE+++VK+H+  GNRWSLIA H+PGRTDNEIKNYWNSHLSR+++  +
Sbjct: 61  LRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNFI 120

Query: 121 TRPSAKSTSPITGILDISPAP-----KRRKNTTDRAS------RQQTNAIEGKTIPPH-- 180
            +PS         + + S AP     KRR   T R++      R +T   +  + PP   
Sbjct: 121 RKPSISQDVSAVIMTNASSAPPPPQAKRRLGRTSRSAMKPKIHRTKTRKTKKTSAPPEPN 180

Query: 181 --IEKEEKEEGLSSKHSKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDV 220
             +   +KE  +      E E   P D+   +  +  N +  N  N  + F+DD+
Sbjct: 181 ADVAGADKEALMVESSGAEAELGRPCDYYGDDCNK--NLMSINGDNGVLTFDDDI 233

[Close]

BLAST of CmoCh06G015520 vs. ExPASy Swiss-Prot
Match: P27898 (Myb-related protein P OS=Zea mays OX=4577 GN=P PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-55
Identity = 102/150 (68.00%), Postives = 117/150 (78.00%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M R PCCEKVGLKRGRW+AEED+LL NYI  +GEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LR D+KRGNI+ +EE +I+K+H   GNRWSLIASH+PGRTDNEIKNYWNSHLSR+I+T  
Sbjct: 61  LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYR 120

Query: 121 RPSAKSTSPITGILDIS---PAPKRRKNTT 148
           R            +D+S    A +RR   T
Sbjct: 121 RKYTAGPDDTAIAIDMSKLQSADRRRGGRT 150

[Close]

BLAST of CmoCh06G015520 vs. ExPASy Swiss-Prot
Match: Q9LZK4 (Transcription factor MYB11 OS=Arabidopsis thaliana OX=3702 GN=MYB11 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 8.2e-55
Identity = 100/152 (65.79%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M RAPCCEKVG+K+GRW+AEED  L++YIQ+NGEGSWRSLPKNAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGIKKGRWTAEEDRTLSDYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LR D+KRGNIT +EE +IVK+H+  G RWS IAS++PGRTDNEIKNYWNSHLSR+++   
Sbjct: 61  LRSDIKRGNITPEEEDVIVKLHSTLGTRWSTIASNLPGRTDNEIKNYWNSHLSRKLHGYF 120

Query: 121 R-PSAKSTSPITGILDISPAPKRRKNTTDRAS 152
           R P+  +T     + +  P PKRR   T R++
Sbjct: 121 RKPTVANT-----VENAPPPPKRRPGRTSRSA 147

[Close]

BLAST of CmoCh06G015520 vs. ExPASy Swiss-Prot
Match: Q9SDS8 (Transcription factor MYB8 OS=Arabidopsis thaliana OX=3702 GN=MYB8 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-46
Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M R+PCCEK  + +G W+ EED+ L +YI+ +GEGSWRSLPK+ GLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHMNKGAWTKEEDQRLIDYIRNHGEGSWRSLPKSVGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRI 117
           LR DLKRGN T  EEQ+IVK+H+ FGN+WSLIA  +PGRTDNEIKNYWN+H+ R++
Sbjct: 61  LRPDLKRGNFTDGEEQIIVKLHSLFGNKWSLIAGKLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmoCh06G015520 vs. ExPASy TrEMBL
Match: A0A6J1F899 (transcription factor MYB111-like OS=Cucurbita moschata OX=3662 GN=LOC111441783 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 2.6e-152
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT
Sbjct: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120

Query: 121 RPSAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIPPHIEKEEKEEGLSSKH 180
           RPSAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIPPHIEKEEKEEGLSSKH
Sbjct: 121 RPSAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIPPHIEKEEKEEGLSSKH 180

Query: 181 SKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDVQNGERSSSSSINSALEMDQWL 240
           SKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDVQNGERSSSSSINSALEMDQWL
Sbjct: 181 SKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDVQNGERSSSSSINSALEMDQWL 240

Query: 241 NFDWELHKISSWLWETETDRCIES 265
           NFDWELHKISSWLWETETDRCIES
Sbjct: 241 NFDWELHKISSWLWETETDRCIES 264

[Close]

BLAST of CmoCh06G015520 vs. ExPASy TrEMBL
Match: A0A6J1I444 (transcription factor MYB111-like OS=Cucurbita maxima OX=3661 GN=LOC111470793 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 6.8e-145
Identity = 251/262 (95.80%), Postives = 256/262 (97.71%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MVRAPCCEKVGLK+GRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCEKVGLKKGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LRRDLKRGNITADEEQMIV MHNAFGNRWSLIA+HMPGRTDNEIKNYWNSHLSRRIYTVT
Sbjct: 61  LRRDLKRGNITADEEQMIVMMHNAFGNRWSLIAAHMPGRTDNEIKNYWNSHLSRRIYTVT 120

Query: 121 RPSAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIPPHIEKEEKEEGLSSKH 180
           RPSAKSTSPITGILDISP PKRRKN TDRASRQQTNAIEGKTIPPHIEKEEKEEGLSSKH
Sbjct: 121 RPSAKSTSPITGILDISPTPKRRKNMTDRASRQQTNAIEGKTIPPHIEKEEKEEGLSSKH 180

Query: 181 SKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDVQNGERSSSSSINSALEMDQWL 240
           SKEGED GPYDWLDGEIERLNND EWNKSNEKMAFEDD+QNGERSSSSS+NSALEMDQWL
Sbjct: 181 SKEGEDLGPYDWLDGEIERLNNDFEWNKSNEKMAFEDDLQNGERSSSSSMNSALEMDQWL 240

Query: 241 NFDWELHKISSWLWETETDRCI 263
           NFDWELHKISSWLWE+E DRCI
Sbjct: 241 NFDWELHKISSWLWESEIDRCI 262

[Close]

BLAST of CmoCh06G015520 vs. ExPASy TrEMBL
Match: A0A345BTH8 (MYB14 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.1e-117
Identity = 213/220 (96.82%), Postives = 213/220 (96.82%), Query Frame = 0


Query: 45  GLLRCGKSCRLRWINYLRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEI 104
           GLLRCGKSCRLRWINYLRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEI
Sbjct: 12  GLLRCGKSCRLRWINYLRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEI 71

Query: 105 KNYWNSHLSRRIYTVTRPSAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIP 164
           KNYWNSHLSRRIYTVTRPSAKSTSPI GILDI PAPKRRKNTTDRASRQQTNAIEGKTIP
Sbjct: 72  KNYWNSHLSRRIYTVTRPSAKSTSPIMGILDIIPAPKRRKNTTDRASRQQTNAIEGKTIP 131

Query: 165 PHIEKEEKEEGLSSKHSKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDVQNGER 224
           PHIEKEEKEEGLSSK SKEGED GPYDWLDGEIERLNND EW KSNEKMAFEDDVQNGER
Sbjct: 132 PHIEKEEKEEGLSSKDSKEGEDLGPYDWLDGEIERLNNDPEWIKSNEKMAFEDDVQNGER 191

Query: 225 SSSSSINSALEMDQWLNFDWELHKISSWLWETETDRCIES 265
           SSSSSINSALEMDQWLNFDWELHKISSWLWETE DRCIES
Sbjct: 192 SSSSSINSALEMDQWLNFDWELHKISSWLWETEIDRCIES 231

[Close]

BLAST of CmoCh06G015520 vs. ExPASy TrEMBL
Match: A0A1S3AX58 (LOW QUALITY PROTEIN: transcription factor MYB12 OS=Cucumis melo OX=3656 GN=LOC103483880 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.4e-99
Identity = 197/309 (63.75%), Postives = 226/309 (73.14%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MVRAPCCEKVGLKRGRW+AEEDE+LTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCEKVGLKRGRWTAEEDEILTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LR DLKRGNIT +EEQMIVK+HN FGNRWSLIA H+PGRTDNEIKNYWNSHLSRRIYT+T
Sbjct: 61  LRTDLKRGNITTEEEQMIVKLHNVFGNRWSLIAGHLPGRTDNEIKNYWNSHLSRRIYTMT 120

Query: 121 RPSAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIPPHIEKEEKEEGLSS-- 180
           R SAKS+SP+TGILDI+PA KR++N   R  +QQT  ++ KT     EKE+ E+GLSS  
Sbjct: 121 RLSAKSSSPVTGILDITPASKRKRNV--RKGQQQTATVKVKT----TEKEKVEKGLSSED 180

Query: 181 --KHSKEG--------------EDWGPYDWLDGEIERLNND-LEW----------NKSNE 240
             K  ++G              ED GPYDWLDGEI RLNN+ +EW          N  NE
Sbjct: 181 DEKEDQDGLGNNQVVLTDGGGEEDLGPYDWLDGEIMRLNNEIIEWGMVESRGNNNNGCNE 240

Query: 241 KMAFEDDVQNGERSSSSSINSALEMDQWLNFD----------------WELHKISSWLWE 265
           K+   +D  N   S SSS+NSALEMD+WLN++                WEL +ISSWLWE
Sbjct: 241 KVRCNEDNHNNYGSCSSSVNSALEMDKWLNWEKDHQDNGSMEGCSLDQWELDEISSWLWE 300

[Close]

BLAST of CmoCh06G015520 vs. ExPASy TrEMBL
Match: A0A6J1CAD0 (transcription factor MYB111-like OS=Momordica charantia OX=3673 GN=LOC111009416 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.1e-83
Identity = 183/322 (56.83%), Postives = 211/322 (65.53%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MVRAPCCEKVGLK+GRW+AEEDE+LT YIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MVRAPCCEKVGLKKGRWTAEEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LR DLKRGNIT+++EQMIVK+HN FGNRWSLIA H+PGRTDNEIKNYWNSHLSR+IYTVT
Sbjct: 61  LRTDLKRGNITSEDEQMIVKLHNVFGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKIYTVT 120

Query: 121 RP-----SAKSTSPITGILDISPAPKRRKNTTDRASRQQTNAIEGKTIPPHIEKEEKEEG 180
            P     S+  +S +T ILDI+P  KRR+ TTDR + + T        P H+EKEE+EE 
Sbjct: 121 WPTSDKSSSAPSSVVTAILDIAPTTKRRRCTTDRKAGKTT-----IPTPDHMEKEEEEEE 180

Query: 181 ---------LSSKHSKE---------------------GEDWGPYDWLDGEIERLNND-L 240
                     S  H +E                     GE+WGPYDWLDGEI RLNN+ L
Sbjct: 181 EEEGEREVLRSELHKEEDDGKALLLGNNEVVLSPIMEHGENWGPYDWLDGEIMRLNNEIL 240

Query: 241 EW-------NKSNEKMAF-------EDDVQNGERSSSSSINSALEMDQWLNF-------- 260
           EW       N  +++          ED  QNG  S SSS+NSALE +Q LN+        
Sbjct: 241 EWGVVESSGNLCSDQTKVMTSSTDNEDHHQNG--SCSSSMNSALENEQCLNWAWEDVGSV 300

[Close]

BLAST of CmoCh06G015520 vs. TAIR 10
Match: AT5G49330.1 (myb domain protein 111 )

HSP 1 Score: 261.5 bits (667), Expect = 7.1e-70
Identity = 137/247 (55.47%), Postives = 169/247 (68.42%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M RAPCCEK+GLKRGRW+AEEDE+LT YIQ NGEGSWRSLPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LRRDLKRGNIT+DEE++IVK+H+  GNRWSLIA+H+PGRTDNEIKNYWNSHLSR+IY  T
Sbjct: 61  LRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAFT 120

Query: 121 RPSA-------------KSTSPITGILDISPAPKRRKNTTDRAS----RQQTNAIEGKTI 180
             S              KS S  +G  + +   K++K  T R+S    +Q   A +  + 
Sbjct: 121 AVSGDGHNLLVNDVVLKKSCSSSSGAKNNNKTKKKKKGRTSRSSMKKHKQMVTASQCFSQ 180

Query: 181 PPHIEKEEKEEGLSSKHSKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAF----EDDV 227
           P  +E +  E G +     EGE  GPY+WLDGE+ERL +   W  ++E+       E   
Sbjct: 181 PKELESDFSEGGQNGNF--EGESLGPYEWLDGELERLLSSCVWECTSEEAVIGVNDEKVC 240

[Close]

BLAST of CmoCh06G015520 vs. TAIR 10
Match: AT2G47460.1 (myb domain protein 12 )

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-59
Identity = 120/235 (51.06%), Postives = 155/235 (65.96%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M RAPCCEKVG+KRGRW+AEED++L+NYIQ+NGEGSWRSLPKNAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYT-V 120
           LR DLKRGNIT +EE+++VK+H+  GNRWSLIA H+PGRTDNEIKNYWNSHLSR+++  +
Sbjct: 61  LRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNFI 120

Query: 121 TRPSAKSTSPITGILDISPAP-----KRRKNTTDRAS------RQQTNAIEGKTIPPH-- 180
            +PS         + + S AP     KRR   T R++      R +T   +  + PP   
Sbjct: 121 RKPSISQDVSAVIMTNASSAPPPPQAKRRLGRTSRSAMKPKIHRTKTRKTKKTSAPPEPN 180

Query: 181 --IEKEEKEEGLSSKHSKEGEDWGPYDWLDGEIERLNNDLEWNKSNEKMAFEDDV 220
             +   +KE  +      E E   P D+   +  +  N +  N  N  + F+DD+
Sbjct: 181 ADVAGADKEALMVESSGAEAELGRPCDYYGDDCNK--NLMSINGDNGVLTFDDDI 233

[Close]

BLAST of CmoCh06G015520 vs. TAIR 10
Match: AT3G62610.1 (myb domain protein 11 )

HSP 1 Score: 215.3 bits (547), Expect = 5.8e-56
Identity = 100/152 (65.79%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M RAPCCEKVG+K+GRW+AEED  L++YIQ+NGEGSWRSLPKNAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGIKKGRWTAEEDRTLSDYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRIYTVT 120
           LR D+KRGNIT +EE +IVK+H+  G RWS IAS++PGRTDNEIKNYWNSHLSR+++   
Sbjct: 61  LRSDIKRGNITPEEEDVIVKLHSTLGTRWSTIASNLPGRTDNEIKNYWNSHLSRKLHGYF 120

Query: 121 R-PSAKSTSPITGILDISPAPKRRKNTTDRAS 152
           R P+  +T     + +  P PKRR   T R++
Sbjct: 121 RKPTVANT-----VENAPPPPKRRPGRTSRSA 147

[Close]

BLAST of CmoCh06G015520 vs. TAIR 10
Match: AT1G35515.1 (high response to osmotic stress 10 )

HSP 1 Score: 188.3 bits (477), Expect = 7.7e-48
Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M R+PCCEK  + +G W+ EED+ L +YI+ +GEGSWRSLPK+ GLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHMNKGAWTKEEDQRLIDYIRNHGEGSWRSLPKSVGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRI 117
           LR DLKRGN T  EEQ+IVK+H+ FGN+WSLIA  +PGRTDNEIKNYWN+H+ R++
Sbjct: 61  LRPDLKRGNFTDGEEQIIVKLHSLFGNKWSLIAGKLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmoCh06G015520 vs. TAIR 10
Match: AT2G16720.1 (myb domain protein 7 )

HSP 1 Score: 186.4 bits (472), Expect = 2.9e-47
Identity = 77/116 (66.38%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 1   MVRAPCCEKVGLKRGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           M R+PCCEK  + +G W+ EEDE L +YI+++GEG WRSLP+ AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY 60

Query: 61  LRRDLKRGNITADEEQMIVKMHNAFGNRWSLIASHMPGRTDNEIKNYWNSHLSRRI 117
           LR DLKRGN T DE+++I+K+H+  GN+WSLIA+ +PGRTDNEIKNYWN+H+ R++
Sbjct: 61  LRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKL 116

The following BLAST results are available for this feature:

BLAST of CmoCh06G015520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ07	1.0e-68	55.47	Transcription factor MYB111 OS=Arabidopsis thaliana OX=3702 GN=MYB111 PE=1 SV=1	[more]
O22264	1.6e-58	51.06	Transcription factor MYB12 OS=Arabidopsis thaliana OX=3702 GN=MYB12 PE=1 SV=1	[more]
P27898	3.7e-55	68.00	Myb-related protein P OS=Zea mays OX=4577 GN=P PE=2 SV=1	[more]
Q9LZK4	8.2e-55	65.79	Transcription factor MYB11 OS=Arabidopsis thaliana OX=3702 GN=MYB11 PE=1 SV=1	[more]
Q9SDS8	1.1e-46	68.97	Transcription factor MYB8 OS=Arabidopsis thaliana OX=3702 GN=MYB8 PE=2 SV=1	[more]

BLAST of CmoCh06G015520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F899	2.6e-152	100.00	transcription factor MYB111-like OS=Cucurbita moschata OX=3662 GN=LOC111441783 P...	[more]
A0A6J1I444	6.8e-145	95.80	transcription factor MYB111-like OS=Cucurbita maxima OX=3661 GN=LOC111470793 PE=...	[more]
A0A345BTH8	2.1e-117	96.82	MYB14 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A1S3AX58	7.4e-99	63.75	LOW QUALITY PROTEIN: transcription factor MYB12 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CAD0	1.1e-83	56.83	transcription factor MYB111-like OS=Momordica charantia OX=3673 GN=LOC111009416 ...	[more]

BLAST of CmoCh06G015520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49330.1	7.1e-70	55.47	myb domain protein 111	[more]
AT2G47460.1	1.1e-59	51.06	myb domain protein 12	[more]
AT3G62610.1	5.8e-56	65.79	myb domain protein 11	[more]
AT1G35515.1	7.7e-48	68.97	high response to osmotic stress 10	[more]
AT2G16720.1	2.9e-47	66.38	myb domain protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 4.8E-17 score: 72.6 coord: 13..63 e-value: 3.9E-12 score: 56.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 10.940289
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 10.231933
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 1.2594E-7 score: 45.259
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 71..112 e-value: 1.25686E-10 score: 53.3482
None	No IPR available	GENE3D	1.10.10.60		coord: 11..67 e-value: 4.7E-16 score: 60.5
None	No IPR available	GENE3D	1.10.10.60		coord: 71..159 e-value: 7.4E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..188
None	No IPR available	PANTHER	PTHR47999	TRANSCRIPTION FACTOR MYB8-RELATED-RELATED	coord: 3..229
None	No IPR available	PANTHER	PTHR47999:SF6	TRANSCRIPTION FACTOR MYB111	coord: 3..229
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 2.1E-12 score: 47.0 coord: 67..112 e-value: 8.7E-14 score: 51.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 17.092113
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 24.235947
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G015520.1	CmoCh06G015520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900386	positive regulation of flavonol biosynthetic process
biological_process	GO:0010224	response to UV-B
molecular_function	GO:0005515	protein binding