CmoCh06G015420 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGCCTCCTCCCGTTTCCCCGCTCCATCTTCTTCTTCGTCTTCTTCTTCAACCTCCTCCCGTTTCCCCAGCCATCGCCATTCTTAATGGCTTCCGATTCCGGTTTCGATTTCAAATCCCATTTGGCCTCTGAAATCTTCTCCTTCTCCGCTCGTACTGTCTCTTGCGCTCATCGCCATTTTAGCCGCCCTTTCTTCGATTGGTATCGCCTTCTTGGGGTATGGTTCCCCTGTTCTTCTGATTTCATGGATTTTTGTTTGTTTCTTTGTTCTTTAATCGATTTTGATAGGTCGAAGAAGATGCTGGAATCGATTCCATTCGTAGGAGATATCTTAAGCTTGGTGGGATTTCCCTTTTCTTTCTCTTTCCATTGCGATTCTGTTTAGTTTTTGGATTGTTTCGTTTTTGTTCATGAGAATGTGCTTTGGATTTGCAGCTCTCCAACTTCATCCAGACAAAAACCCTCACCCCAAAGCGGAATTTGCCTTCAAGCTTGTCTCTCAGGTTCGATTCGATTCATTTTCTGAAATGTTCTTTGTGATTTTGCTTTTTTTTTTTTTTTTCTTTTGTGATGGATTTTGGATCACTGTTCGTTTGTTTGTTTTGCATTTAATTTCTTTAATCACGAACTACTCGTGATCTTGATGAACTTTAATGCAATATCAATTTAGAGGTTGAGGAATTTGAATGGGTATCTGTAGGGATATGCTTGTTTGAGTGATAATGTGAAGAGAACGGCATTTGATTTGGATAGAATGAAGAATTTCTGCCCTGATTGCAACACAATTCCTTATACAAACTTGACTGCCTTGAATGTATTGGGAAGCTTTAACAAGAACAACAAACATGGAGTCGTCAAGAACATTAAGGAGAGATTGAGAGAAGAATCAAATGTGATTGAGAATTGTTTGCTGAAGAACACCAGCAGATTCCATCACATAAACCACAAAGAATCCCCAATCTTCAACCCTTCTGATTATGTAAGTCAAGGATACCCTCATTTTCGAACCCGAATCCACCCGAAACCGCAGAATTTTCGGTGTTTTCGGTCTGGGAATTCGCTGAAGTATGAACAAGGTAGGGGGCAGTTTGAGTACCCATTGTTTGAGGTTAGATCAGAAAGCTTTCATTTACAGAAACAATCAGCTTTTGTTTATTCAAATGATAGCAAATCCCATTGATTAGAACTCGTTTCTTCTTCTTTGAGCAACTAAATTCATACTTCCACACTGTTTTAGAGTTTTTCAAGTTACAGCAAATTCTTCCCCGCTGTCTTTTGATTAACTTTTGGCCTGTTCTTAAAATGTTTTATGATTAGTTCCAAATCTTATTGAAGTGGGTGAGAACTTTTCTTCCTTTTTTTGGTATTTGGGTTTGTTTTGAAATTTTGTTGTGTTCAAATTTTCAATATTAAAAAATATGAACTTACATTTACATATTTTATCCTGAAAATTATCGATTAAAAATTTCTTTGAAATAATAATGGACATATGAAGAAGTTCTCGTTCATGTTCTGTCTTCCCTTAGTCCCCACAAAAATAAATAAATTTCTTAGAGTATAGGAATTGACATAGGAATTAACATGGGAGGCAGTTCCCGTTCATATCTCGTCTCTCTTCAATCTCCACAAAAATTGACATAAGAGATAATTCTCATAACTATTCTAGACTCGGGTATCATGTGGGCATGTCGCGGATTGAGGCAACTCCCAAGAGTGGGAACTGTCTCTCTTTGAATGAGCTTTGGCTTCATTTGTCCATTCAAATTCAGCCTTCCAATTCCCCACCACACACCCTATTTATAGTTTTATTTATTTATTTATTTTCCCATATATATTTATTTCCACATTCATGATTCTTAGCCTTTTAACTTCAATATTCATACATAAATCAGTCGCTTCTATTTTTATTTGATTTGTCAAATCAAATCTATATCTCTTTTTTTTTAGTTCCTCTCGAATTTGGTTCATCCTAAGCAGAGAGTGAGAGAATAACGGTTAAAAGATGGTTTACTGTTTTATTTATTTATTTATTTTCCCATATATATTTTTTTCCACATTTATGATTCTTAGCCTTTTAACTTCAATATTCATACATAAATCAATCGCTTCTATTTTTATTTGATTTGTCAAATCAGATCTATATCTCTTTTTTTTAGCTCCTCTCGAATTTGGTTCATCCTAAGCAGAGAGTGAGAGAATAACGGTTAAAAGATGGTTTACTGTTCACTGGGAAAATTTTAAAATTTTAAAATATCTCGAAAATACACAAAAAGGTATGTAATTCAAAATATGTTTTAGCCGACTCATGATTTTAGAAAATTTCTCTATAATCTATGGTTTGTACGAGAGTTTGCTGTTCAGAGTGAAAGTTTTAAAATTTCTCGAAAATAGTTCTCGAAAATAGATATGTTTTAAATTGTAAAATGACTAGAACCACGTGATAGATTATTTTTTTAATAAATTAAATTCACACTATATATATATATACAAACAAGAAGAGGGTATGGATAAAGGGTGTCCTTTCCATTATCATGTATTCCTTGTTTTGTAAAAGAAAACTCAAATTAATTAATTGTGGGGGATGATTTCATTTTGCCAATTTAATTTTCATTTAATTAATTTAGATTTTGATAATTTAATTTCGTTACAATATTTTTTTCTCGTACTCACATGCATAAAATGATCGATATAGCAAAAGATTTTGAGTAGGTGAAAGATCATTTAAAAAAAAAAAATTAATAAGATGACTAAATAAAATAAAATAAAAAATTAATGGAATTTGAAATAACGAGCGAGAGAGAGAGCTGAGCGGTAGAGACAGAAAATCAAGTCCCCGAACTTTAAAATTTGTCACCTAATAACGTTGTTAATATATCAATATAATTACGACTAAAATAAGAAAATAAAATAAATATTTGAAAATTTTGATTTATTTTACACAAAAGGCAAGGCATGAATAAAACCAATATTTTGTTCCCTTTCTATTTATGGATTAAGTTGTTTGAAATCTAAAATAAACTCCAATGCTAATATCGACGGTCTCAACTTTTTTAAATTTTTTGAAATATTATAAACATTTAATACCAATTAATATATTTAGTCAAAAATAATAATTATTATTACAAATTAACGGTAAGCGCATCCAAGAAAAAAAAAAAAACAAAAAAAAAAAAACATTATATGACTGTACATGTGCTGACGTGTCTGACTGGTCTGACTCATCAGCCACCCTCCACTGCCAATTTTTTTAAAGTTAAATTAATCTTTCTAATTTTAAAAATAATATTAACACTTTTATTAAAAAAGGTTATCAATTTAAAAAATTTATAGGTGTTTTTTTGAAATGTTTAAATTCTTTTTTAAAGATAATAATAAAATTTTTAAAACCCTTAAAAAAAATTTTAAGAGTATTTTTATTCCAAATTATAAGATTTTTTTTTTTTTTACGGTATCAATTCAGATATTATCTTTTTGGTCTGTTACATATTATCGTCAGCCTCACGGTTTAAAAACATATGAGAGGTTTCCACACCTTATAAGAAATGTTTTGTTTCCCTTTTTAAACTGACGTCGGATCTCACAAGAAGTATTTTGAATTTATAATTATGAATGTTGTGACGGTTTCATTTAATAATTTTGCGATAAAGTGGTTTAAAAAATTATATAATATAATTTATCGAGTTGGAATTTTATCAAACAATTATAACGTATACCAATTTATTTTTGTTTTTTTTTTTATCCGAAAATTGAATTATTTCATGTTCCTTTTATTGAACATATAAAACAAAATAATGAAAAGGATGATACAATCAATGAGTTGGTCACAATATTACATATATATATCAATCATTTTGTCAAAGCATCGTTGATTAATGCAAATATACATATATTTTGATGTAATTATGAAGATTATGCCTTATTATAATTTTAATTTAAAATTAAACGCTACTGATACGATACTATTTCAAAATATAATTATTTTTATTAGAATATTAGACAAAATACCGATATACAGTGATGATTAAAACGCTTGTTTGAATTAAGTTCGAACAAGCTAGGTTTTACCATGATGATTTTTTATTTAATGTTGGTAGTCGTTTTTAAATATTCATAAAAAAAAATGGTATTTTTTCTTGTAACGACCCATACCCAGGATTCTGAATTCAAGCTCGGCATATGATTAGCACGATATTCCCCGGCATCTCATAGCTATGTTACTTACTTCTAACTTCTAAGAGTGAAAACTATTTTTACAGACCAACCCGAATATTTAGGATATATTTTGTCTTTATTCACATATATTATAGAAAAATTTTCAAAAAGTCAGCCAATGTAGAATTGATAACAACAACAAAAAAAAAAAGACAGTGCATCTTGTTAGTATAGATAGTGACTTTTAAGTGTTCTAAACATTTTTTTAAGTCATTTTATTTTTAGGATTGCTCTGGTTCGGATATGGTAGCATTCTCTTACTCGGAATAATTATGGTAAAAAATAAATAAAATAAGAAAAAAACACAGTAATTTAAGGAGGAGGAAGAAGATGTGTTCGTTAGTGTGTTTTGTGTTTTGTATGTTTGTTTGTTGGGTGATGTTGTTCTGTCAACTGATTGATGCCAGGCTGGCATCCCCGCTATCATTGGTCATGGGTCCCATTTCTCCTCTCCTTCTGTCAACCCACATGCCCTTTCATTGCTCCCATCCCATGCACCCTCTCTCACGCACTTCCTATTACCACTCGTCCCGTTTTACTGTTCGAGTCGATAATTTTGATCATAAATTGACGCTCCTTCGTGTGGGATTGTATTGAAAAATTTTGAACATGCATCGACTAATTACTGGGATGGTATTGTAGTTAAGTGTTCTCTATTTTAGACGTGAATTATGTGATTGTTGGGAGTTGTTCCATTGGGATAAGACAATGAAAAAATAGGGTTGGTTTGTTGGGTTATTTGGTTTTTTTTAGCCCTTGTGGATTCAACAAACGTCATCAAATTCTCTCTGTTTTGGGCATTGGAGGCGAAACGCCCAAATTTTAAGTCCAGGAGAAGGAAGACATAGGCATAGGGCAAAACCCTTTTGCTGTGATGGAGGGCCGTTTCAAACAATTTTGTCGGCGATAGACGTTATTAATCATATTCACAAACAGGGTAATTGTCAATTAGTGGCAATTAATGTTGTTGCTAATCAAAATTTCCCCTTTCTTTTGTTTTTGATTTTATTCTCCCAAGCAAGAACAAGGCAGATTTTCTTCACCCGTTTCCTTCTTTTCCTTCTTTTTAGTTTTGGGGTGGATTTGGTTGTTTCTCTCTCTCTCTCTCTCTCTCGGCTGTCGTTTTTACAGCGTATATTGCCCTCGTTTCCTTCCTTTCCCTACAATTTCCTTATGTAAGTTCTTGATTTTGGTTGTGCATTTATATCATTTGCCTCACTTTCCCTTTCGATTCCTCCGTTTGTTTATGTTCTTCCGGTTTCAGCTCCCCTTTGCCTCGCCGTGTTTGCTGCTGGTTTGCCCCTTCTTCATCTCGATTTCTCTTCATTTTGGTCATTGTCGTTCCTGGCTTTGACCAATGAGGATGCTAGTAAGTACGTTTCTTTTATCTGGGTTTTCTTTGTTTTTTTGTTTTACGAATCATTTTATGTCGATTTCTGAAGAACCCCTTTTGTTCTTACCCTTGTTTTTCAATGTCTTTCACCATCTGTTTCATGTCTGTGTTCTTTACAGATGGTCCAGAAACCCTTTTTGA TGCCTCCTCCCGTTTCCCCGCTCCATCTTCTTCTTCGTCTTCTTCTTCAACCTCCTCCCGTTTCCCCAGCCATCGCCATTCTTAATGGCTTCCGATTCCGGTTTCGATTTCAAATCCCATTTGGCCTCTGAAATCTTCTCCTTCTCCGCTCGTACTGTCTCTTGCGCTCATCGCCATTTTAGCCGCCCTTTCTTCGATTGGTATCGCCTTCTTGGGGTCGAAGAAGATGCTGGAATCGATTCCATTCGTAGGAGATATCTTAAGCTTGCTCTCCAACTTCATCCAGACAAAAACCCTCACCCCAAAGCGGAATTTGCCTTCAAGCTTGTCTCTCAGGGATATGCTTGTTTGAGTGATAATGTGAAGAGAACGGCATTTGATTTGGATAGAATGAAGAATTTCTGCCCTGATTGCAACACAATTCCTTATACAAACTTGACTGCCTTGAATGTATTGGGAAGCTTTAACAAGAACAACAAACATGGAGTCGTCAAGAACATTAAGGAGAGATTGAGAGAAGAATCAAATGTGATTGAGAATTGTTTGCTGAAGAACACCAGCAGATTCCATCACATAAACCACAAAGAATCCCCAATCTTCAACCCTTCTGATTATGTAAGTCAAGGATACCCTCATTTTCGAACCCGAATCCACCCGAAACCGCAGAATTTTCGGTGTTTTCGGTCTGGGAATTCGCTGAAGTATGAACAAGTTTTGGGGTGGATTTGGTTGTTTCTCTCTCTCTCTCTCTCTCTCGGCTGTCGTTTTTACAGCGTATATTGCCCTCGTTTCCTTCCTTTCCCTACAATTTCCTTATCTCCCCTTTGCCTCGCCGTGTTTGCTGCTGGTTTGCCCCTTCTTCATCTCGATTTCTCTTCATTTTGGTCATTGTCGTTCCTGGCTTTGACCAATGAGGATGCTAGTAAATGGTCCAGAAACCCTTTTTGA ATGGCTTCCGATTCCGGTTTCGATTTCAAATCCCATTTGGCCTCTGAAATCTTCTCCTTCTCCGCTCGTACTGTCTCTTGCGCTCATCGCCATTTTAGCCGCCCTTTCTTCGATTGGTATCGCCTTCTTGGGGTCGAAGAAGATGCTGGAATCGATTCCATTCGTAGGAGATATCTTAAGCTTGCTCTCCAACTTCATCCAGACAAAAACCCTCACCCCAAAGCGGAATTTGCCTTCAAGCTTGTCTCTCAGGGATATGCTTGTTTGAGTGATAATGTGAAGAGAACGGCATTTGATTTGGATAGAATGAAGAATTTCTGCCCTGATTGCAACACAATTCCTTATACAAACTTGACTGCCTTGAATGTATTGGGAAGCTTTAACAAGAACAACAAACATGGAGTCGTCAAGAACATTAAGGAGAGATTGAGAGAAGAATCAAATGTGATTGAGAATTGTTTGCTGAAGAACACCAGCAGATTCCATCACATAAACCACAAAGAATCCCCAATCTTCAACCCTTCTGATTATGTAAGTCAAGGATACCCTCATTTTCGAACCCGAATCCACCCGAAACCGCAGAATTTTCGGTGTTTTCGGTCTGGGAATTCGCTGAAGTATGAACAAGTTTTGGGGTGGATTTGGTTGTTTCTCTCTCTCTCTCTCTCTCTCGGCTGTCGTTTTTACAGCGTATATTGCCCTCGTTTCCTTCCTTTCCCTACAATTTCCTTATCTCCCCTTTGCCTCGCCGTGTTTGCTGCTGGTTTGCCCCTTCTTCATCTCGATTTCTCTTCATTTTGGTCATTGTCGTTCCTGGCTTTGACCAATGAGGATGCTAGTAAATGGTCCAGAAACCCTTTTTGA MASDSGFDFKSHLASEIFSFSARTVSCAHRHFSRPFFDWYRLLGVEEDAGIDSIRRRYLKLALQLHPDKNPHPKAEFAFKLVSQGYACLSDNVKRTAFDLDRMKNFCPDCNTIPYTNLTALNVLGSFNKNNKHGVVKNIKERLREESNVIENCLLKNTSRFHHINHKESPIFNPSDYVSQGYPHFRTRIHPKPQNFRCFRSGNSLKYEQVLGWIWLFLSLSLSLGCRFYSVYCPRFLPFPTISLSPLCLAVFAAGLPLLHLDFSSFWSLSFLALTNEDASKWSRNPF Homology
BLAST of CmoCh06G015420 vs. ExPASy Swiss-Prot
Match: Q9FH28 (Chaperone protein dnaJ 49 OS=Arabidopsis thaliana OX=3702 GN=ATJ49 PE=2 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 5.5e-12 Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy Swiss-Prot
Match: Q8TQR1 (Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=dnaJ PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 7.2e-12 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy Swiss-Prot
Match: P0CW07 (Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=dnaJ PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy Swiss-Prot
Match: P0CW06 (Chaperone protein DnaJ OS=Methanosarcina mazei OX=2209 GN=dnaJ PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy Swiss-Prot
Match: Q24133 (DnaJ protein homolog 1 OS=Drosophila melanogaster OX=7227 GN=DnaJ-1 PE=1 SV=3) HSP 1 Score: 70.1 bits (170), Expect = 4.6e-11 Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy TrEMBL
Match: A0A6J1E168 (dnaJ homolog subfamily C member 12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429786 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.7e-120 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy TrEMBL
Match: A0A6J1E1U6 (dnaJ homolog subfamily C member 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429786 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.7e-120 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy TrEMBL
Match: A0A6J1I4E2 (dnaJ homolog subfamily C member 12-like OS=Cucurbita maxima OX=3661 GN=LOC111470861 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 9.8e-113 Identity = 198/212 (93.40%), Postives = 201/212 (94.81%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy TrEMBL
Match: A0A5D3CXW5 (Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001280 PE=4 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 8.1e-83 Identity = 159/233 (68.24%), Postives = 175/233 (75.11%), Query Frame = 0
BLAST of CmoCh06G015420 vs. ExPASy TrEMBL
Match: A0A5A7U7H9 (Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G007750 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 2.3e-82 Identity = 158/233 (67.81%), Postives = 174/233 (74.68%), Query Frame = 0
BLAST of CmoCh06G015420 vs. TAIR 10
Match: AT3G06778.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 155.6 bits (392), Expect = 6.0e-38 Identity = 85/204 (41.67%), Postives = 118/204 (57.84%), Query Frame = 0
BLAST of CmoCh06G015420 vs. TAIR 10
Match: AT5G49060.1 (Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) ) HSP 1 Score: 73.2 bits (178), Expect = 3.9e-13 Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CmoCh06G015420 vs. TAIR 10
Match: AT4G19570.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 72.8 bits (177), Expect = 5.1e-13 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of CmoCh06G015420 vs. TAIR 10
Match: AT3G57340.1 (Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) ) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12 Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of CmoCh06G015420 vs. TAIR 10
Match: AT3G57340.2 (Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) ) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12 Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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