CmoCh06G015030 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGAAGAACGGCAAGGCGGAGCTCCCCACGGTGTTTTACTGGCGGTGGTCGTCGCCATCGTCATCGTTGGCCCCTTCCTCCTCGGCGACGGGGAGGCTCTTACCGAAGCCATTTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTTCTCGCCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCTGACTCCATCCACCGAGTCACTGGTTCCCCCGTCGGCGTCGCTCTCTTCCTCGTCCTCATTCTCTTCCTCCTCTACAATCGGATTTCGATCTTCGGCGGCGACGATGATTCCGGCGACTGA ATGATTGAAGAACGGCAAGGCGGAGCTCCCCACGGTGTTTTACTGGCGGTGGTCGTCGCCATCGTCATCGTTGGCCCCTTCCTCCTCGGCGACGGGGAGGCTCTTACCGAAGCCATTTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTTCTCGCCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCTGACTCCATCCACCGAGTCACTGGTTCCCCCGTCGGCGTCGCTCTCTTCCTCGTCCTCATTCTCTTCCTCCTCTACAATCGGATTTCGATCTTCGGCGGCGACGATGATTCCGGCGACTGA ATGATTGAAGAACGGCAAGGCGGAGCTCCCCACGGTGTTTTACTGGCGGTGGTCGTCGCCATCGTCATCGTTGGCCCCTTCCTCCTCGGCGACGGGGAGGCTCTTACCGAAGCCATTTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTTCTCGCCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCTGACTCCATCCACCGAGTCACTGGTTCCCCCGTCGGCGTCGCTCTCTTCCTCGTCCTCATTCTCTTCCTCCTCTACAATCGGATTTCGATCTTCGGCGGCGACGATGATTCCGGCGACTGA MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD Homology
BLAST of CmoCh06G015030 vs. ExPASy TrEMBL
Match: A0A6J1I8A7 (uncharacterized protein LOC111472294 OS=Cucurbita maxima OX=3661 GN=LOC111472294 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 8.5e-55 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CmoCh06G015030 vs. ExPASy TrEMBL
Match: A0A6J1FCS5 (uncharacterized protein LOC111444213 OS=Cucurbita moschata OX=3662 GN=LOC111444213 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 8.5e-55 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CmoCh06G015030 vs. ExPASy TrEMBL
Match: A0A6J1IFG7 (uncharacterized protein LOC111472296 OS=Cucurbita maxima OX=3661 GN=LOC111472296 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.2e-54 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of CmoCh06G015030 vs. ExPASy TrEMBL
Match: A0A5A7U157 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001100 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.7e-51 Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of CmoCh06G015030 vs. ExPASy TrEMBL
Match: A0A0A0L5U0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154405 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.7e-51 Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of CmoCh06G015030 vs. TAIR 10
Match: AT3G06890.1 (unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 169.1 bits (427), Expect = 2.1e-42 Identity = 88/113 (77.88%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of CmoCh06G015030 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04 Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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