CmoCh06G014900 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTAAAAATTCAAATCTTGGACAAAACTCGTCCCCATCTCTCCTCTCATTGTTCTTCTTTCTCCCCCTCAATTCCCTCAAATTTTGAATTTTGATCTCCATTTCACCCTCACCCACCCTTTTTAAAACCCTAATTTTTCAACTCATCAGATTCTGAATCTCCATTTCAGGCCGATTCGATCCCTGCTTCAATGGCGAACGCCGACTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCGTGAGTTCCCTTCATTCCTTCGTTTTCAGTTTCTCATTCATTCTGGCTTTCGGGCTTTATCAACTTTGTTGTTTTTGTTTCTTTCTTGTTCACAGAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGTATTGTTTTCTACAATGTGTTTATAATTCTTGAATTTAACTCCAATCTTAACAGATTTTGACTTGTCTCTTCTCAGGAATTGAACGAATCAAGAGCAGAGCTGCTTGATAGAATTCAATTTCTTAAGCAGGTGGAGTCTAAGATATAAAATGTCCTAGCTGTGAGATAAAGTTGGATGTTCTTGGTCATTTACTTGTTTTTGTGCTCTGATTTTGTGAACTTTCCTTGTGTTTGAGCATTTCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGTAAGTTAATAATGTATTGCTTGTTTTCTTCATTCTTTTCTTTGTATTCATATCTTTCTTAAAAGTAGGCTTATCTCTGTCAGAATGCCTTGTTCTAAGATATCTGTGTTTTAGTTTTCTTTGATGGGTCTATATGATCCATAAACAAGTTGGTCATCCAAATGGAGTGTTTGAAGATTGGATCCTGTGGCTTATACTGTGAGATCCACCTTAGTTAGGAGGAGAACGAATCATTCTTTATAAGGGTGTGGAAACCACTCCCTAGAAGAGACGTTTTAAAAACCTTGAGGAGAAGCCCAAAAGGAAAACCCAAAGATGACAAATATCTACTAGCGGTGGGCTTGGGCCGTTACAAATGGTATTAGAGCCAGATAACGGGCGATGTGCCAATAAGGACATTGGGCTCTAAAGGGGGTGGATTGGGAGGTCTTACAAATCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATCTGATAGCGGTGAGCTTGGACTGTTACAATATCAGTTAACTGATTCTTGGTAGTTCGAAAAGGGTTTCGAGTCTGCTAATGTTTCCAGCAGAGGATACTTGATCCCTCAATACCTTGGTTTAGAAGGGAAAAAAAAGAACATATGATATTAATGACCCTTTTGTTGGTCACGCATATTCCTGTTCTTTTCTGCTTTTGTATCTGTTTCTCCAGCATCACTTGACATAGGCATTCAATTCTCATACAGGAACTGTCTGAACTCAAGAAATCGCTCAACGTTGAGGTGGAGCAACTTCGCACGGTAAGCCAAATGCTTCACTCAGATTGAATGTGCTAAGGGTAATAAATTTGTGGCATGAAAGCAGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGTGTAAGTTCTAATTCTAATGACTTTCATACTCAACAAAATACCTCCAACCCGCCTCGTCCCACCGTATGTTTTCAACAGCCATTGAAGAAAATTTATGAATCCTGGCAGGTTCAGGATGATTCTAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTTAACAGAGGGTAAGGGAAATGAAGCTGAAAATTAAGAGAATTTCCATTGTGTTCGTAATGTGGCGATGGATTTCCACGTTTGACTGTTTTTCAAAGCTTTGTAATGGGATTGATAAGATTTTCCCGGCATTTAAGGAAGCATTGAATTTGTAAGTGTAATTTTTTACACGCACATCAACATTAATAAGTTCATTCTTCAAGGATATATGTATTTAATTTTTGGGAAGCAGGGCTGGTGGTATCGATTTTTTTCTCAACTAGCAAATTG GGTTAAAAATTCAAATCTTGGACAAAACTCGTCCCCATCTCTCCTCTCATTGTTCTTCTTTCTCCCCCTCAATTCCCTCAAATTTTGAATTTTGATCTCCATTTCACCCTCACCCACCCTTTTTAAAACCCTAATTTTTCAACTCATCAGATTCTGAATCTCCATTTCAGGCCGATTCGATCCCTGCTTCAATGGCGAACGCCGACTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGAATTGAACGAATCAAGAGCAGAGCTGCTTGATAGAATTCAATTTCTTAAGCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGAACTGTCTGAACTCAAGAAATCGCTCAACGTTGAGGTGGAGCAACTTCGCACGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGTGTTCAGGATGATTCTAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTTAACAGAGGGTAAGGGAAATGAAGCTGAAAATTAAGAGAATTTCCATTGTGTTCGTAATGTGGCGATGGATTTCCACGTTTGACTGTTTTTCAAAGCTTTGTAATGGGATTGATAAGATTTTCCCGGCATTTAAGGAAGCATTGAATTTGTAAGTGTAATTTTTTACACGCACATCAACATTAATAAGTTCATTCTTCAAGGATATATGTATTTAATTTTTGGGAAGCAGGGCTGGTGGTATCGATTTTTTTCTCAACTAGCAAATTG ATGGCGAACGCCGACTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGAATTGAACGAATCAAGAGCAGAGCTGCTTGATAGAATTCAATTTCTTAAGCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGAACTGTCTGAACTCAAGAAATCGCTCAACGTTGAGGTGGAGCAACTTCGCACGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGTGTTCAGGATGATTCTAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTTAACAGAGGGTAAGGGAAATGAAGCTGAAAATTAA MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQEDVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN Homology
BLAST of CmoCh06G014900 vs. ExPASy TrEMBL
Match: A0A6J1G8M8 (CAP-Gly domain-containing linker protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451732 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CmoCh06G014900 vs. ExPASy TrEMBL
Match: A0A6J1IDF2 (uncharacterized protein LOC111472345 OS=Cucurbita maxima OX=3661 GN=LOC111474206 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 8.6e-71 Identity = 150/157 (95.54%), Postives = 154/157 (98.09%), Query Frame = 0
BLAST of CmoCh06G014900 vs. ExPASy TrEMBL
Match: A0A6J1C8F7 (uncharacterized protein LOC111009183 OS=Momordica charantia OX=3673 GN=LOC111009183 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.4e-52 Identity = 126/158 (79.75%), Postives = 134/158 (84.81%), Query Frame = 0
BLAST of CmoCh06G014900 vs. ExPASy TrEMBL
Match: A0A6J1IY17 (CAP-Gly domain-containing linker protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479493 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52 Identity = 127/157 (80.89%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CmoCh06G014900 vs. ExPASy TrEMBL
Match: A0A5D3D134 (CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00970 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.6e-51 Identity = 127/157 (80.89%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CmoCh06G014900 vs. TAIR 10
Match: AT4G15790.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). ) HSP 1 Score: 125.9 bits (315), Expect = 2.8e-29 Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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