CmoCh06G014310 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGACAATACAGGTAATTTATTGCCTTTTAGAATACATATCAAAGATACATGAGGTTATATTCACATACTCATAAGCAATGAGCTTTGCTTTGACGACCTAAGTCCACCGTTAGTAGATATTGTACTATTTGGATTTTTTCTTTTGAGCTACCCTTCAAGATTTTTAAAAAGTGTCTACTAGGGAGAGTTTTTCACACCTTTATAAAGAATGTTTCGTTCTTCTTCCGACCCCACGTAGCACAAACCCAAGTGGGCTGAAGATCTAAACCAAATTTAGATGGTGGTTTGTGTTCGGAGAAGATTTTTGCCGGCAACCGATCCTCATCTTTTCCCCAACTGGATAACACAATGCAATGATTCTTGTGGGGTCTCTTAAAGTTTTAGACAGATTGGCCAGCTGTGGCTAATGACCCACCATCTCACATGCTCAGCCAATGTGGTTTTGACTCACCCATCACTCCCTTTTCCCCCTTCTAAACTCTATATATCTTCTCTCTCTCGCTTGCTCAGCCAAGTGTGTGCGTGTATAACACTATAAGTTCTGTATTTAGTTCTTTTGTAGCTCCGAGTATAGACAACATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTGTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCATCCTCATGTTTCTCTTCAGGTACTTCCTTTTTCCAAATTTCATTCATTTGGGTATGCTTTTTTAGTCTCTCTGTTTGTGGCTGTGAATTCAAACAAGCTCGATCAATCTGCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGTTGCCTACAGTGGCGTAAGCAAAGGCACCGGCGTGTTCATCCCTCGGTCTTTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAACAACATAAAGGCAAACCGACAGTTTCCAATCGCTATTGATGTGAATTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTCAAGGATTCGAGGAATTTGAGGAAAAGGGTATCAGAATTTAGATTAAAAAAATAATTCTTTCACCAAGTATTTAAGTATGGTGATGCCTGTACATGGAAGAAGCTATAGTATTAGCTCTATTAATTACTGGGTTTTCATTGGTTTATGTGTTCCATTGGAAGGTTAATTAATTAACCTAAGGTTTGTGAACCTCCTCCCTCCTTGTGTTCTTCTTCATGAGAGAAAGAGTTCGTTTGTTAGGATCGTCAATCCGAACATAACTCAAAGTACGAAATACTCGAATCTCGACTGCAAAAGCTGAGATGAGTCTGAATTTGTGTTGTAATATGCTCTTAACTGGCAGCCATGCAGTGGCACATGAGCCGTCATGTTTGGATAGCTGGATCTCTGTTGCAAGGAAAGCTAAAGTTTTCTAAAAACATATTCACAGAGAGACAGAGGAGAGAGAAGGATTCGGAGGCTTTAACTTGATGTTTGACTAGATCTCGTATTTTAACTGGTTGAATCAAGTTCTGATTAAATTATAGGATTATTAATTGGTCGTATTAAG ATGTACGACAATACAGCTCCGAGTATAGACAACATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTGTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCATCCTCATGTTTCTCTTCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGTTGCCTACAGTGGCGTAAGCAAAGGCACCGGCGTGTTCATCCCTCGGTCTTTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAACAACATAAAGGCAAACCGACAGTTTCCAATCGCTATTGATGTGAATTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTCAAGGATTCGAGGAATTTGAGGAAAAGGGTATCAGAATTTAGATTAAAAAAATAATTCTTTCACCAAGTATTTAAGTATGGTGATGCCTGTACATGGAAGAAGCTATAGTATTAGCTCTATTAATTACTGGGTTTTCATTGGTTTATGTGTTCCATTGGAAGGTTAATTAATTAACCTAAGGTTTGTGAACCTCCTCCCTCCTTGTGTTCTTCTTCATGAGAGAAAGAGTTCGTTTGTTAGGATCGTCAATCCGAACATAACTCAAAGTACGAAATACTCGAATCTCGACTGCAAAAGCTGAGATGAGTCTGAATTTGTGTTGTAATATGCTCTTAACTGGCAGCCATGCAGTGGCACATGAGCCGTCATGTTTGGATAGCTGGATCTCTGTTGCAAGGAAAGCTAAAGTTTTCTAAAAACATATTCACAGAGAGACAGAGGAGAGAGAAGGATTCGGAGGCTTTAACTTGATGTTTGACTAGATCTCGTATTTTAACTGGTTGAATCAAGTTCTGATTAAATTATAGGATTATTAATTGGTCGTATTAAG ATGTACGACAATACAGCTCCGAGTATAGACAACATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTGTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCATCCTCATGTTTCTCTTCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGTTGCCTACAGTGGCGTAAGCAAAGGCACCGGCGTGTTCATCCCTCGGTCTTTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAACAACATAAAGGCAAACCGACAGTTTCCAATCGCTATTGATGTGAATTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTCAAGGATTCGAGGAATTTGAGGAAAAGGGTATCAGAATTTAG MYDNTAPSIDNMEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVVAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPIAIDVNSQVSNNNSLRPKKGQGFEEFEEKGIRI Homology
BLAST of CmoCh06G014310 vs. ExPASy TrEMBL
Match: A0A6J1F5U9 (uncharacterized protein LOC111441102 OS=Cucurbita moschata OX=3662 GN=LOC111441102 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 5.8e-69 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CmoCh06G014310 vs. ExPASy TrEMBL
Match: A0A6J1I9A5 (uncharacterized protein LOC111472261 OS=Cucurbita maxima OX=3661 GN=LOC111472261 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.8e-60 Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of CmoCh06G014310 vs. ExPASy TrEMBL
Match: A0A5D3D068 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00190 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47 Identity = 105/125 (84.00%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of CmoCh06G014310 vs. ExPASy TrEMBL
Match: A0A1S3AX25 (uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47 Identity = 105/125 (84.00%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of CmoCh06G014310 vs. ExPASy TrEMBL
Match: A0A0A0LAE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.2e-47 Identity = 106/126 (84.13%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of CmoCh06G014310 vs. TAIR 10
Match: AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 3.4e-13 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 0
BLAST of CmoCh06G014310 vs. TAIR 10
Match: AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-12 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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